ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21n07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PUR2_ARATH (P52420) Phosphoribosylamine--glycine ligase, chlorop... 29 3.3

>PUR2_ARATH (P52420) Phosphoribosylamine--glycine ligase, chloroplast precursor|
           (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide
           synthetase) (Phosphoribosylglycinamide synthetase)
          Length = 532

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = +3

Query: 123 PYTISAHGTTYSKLPYVSPQRE*TNNQTLIQNRYNSER------PCRAGSAYVLPSLSHG 284
           P+ +S    + + LP+V+P +  T N  L  +R++S R        R  S    PSLS G
Sbjct: 28  PFLLSLRFASSNSLPFVAPLKFSTTNHVLSNSRFSSNRIQRRLFLLRCVSEESQPSLSIG 87

Query: 285 D 287
           +
Sbjct: 88  N 88


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,213,370
Number of Sequences: 219361
Number of extensions: 870789
Number of successful extensions: 2029
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2028
length of database: 80,573,946
effective HSP length: 87
effective length of database: 61,489,539
effective search space used: 1475748936
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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