ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd21g23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 46 0.13
2gb|AC011939.9| Homo sapiens chromosome 15, clone RP11-16E23, com... 46 0.13
3gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 46 0.13
4ref|XM_843730.1| PREDICTED: Canis familiaris hypothetical protei... 42 2.1
5emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 42 2.1
6emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 42 2.1
7dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 2.1
8dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 2.1
9ref|NM_135247.2| Drosophila melanogaster SP1070 CG9138-RA (SP107... 42 2.1
10gb|AC008326.9| Drosophila melanogaster, chromosome 2L, region 27... 42 2.1
11gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, ... 42 2.1
12gb|AF239608.1|AF239608 Drosophila melanogaster SP1070 mRNA, comp... 42 2.1
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.1
14gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24... 42 2.1
15gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 2.1
16ref|XM_468373.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
17ref|XM_469490.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.1
18gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
19ref|XM_583900.2| PREDICTED: Bos taurus similar to squamous cell ... 40 8.1
20gb|DQ443345.1| Bombyx mori small nuclear ribonucleoprotein prote... 40 8.1
21gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, compl... 40 8.1
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.1
23gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 40 8.1
24gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 8.1
25emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 8.1
26ref|XM_538449.2| PREDICTED: Canis familiaris similar to Interleu... 40 8.1
27ref|XM_805795.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.1
28gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, comp... 40 8.1
29gb|CP000088.1| Thermobifida fusca YX, complete genome 40 8.1
30gb|DQ372923.1| Bacteriophage mu1/6, complete genome 40 8.1
31gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 40 8.1
32emb|AL732594.5| Mouse DNA sequence from clone RP24-189G18 on chr... 40 8.1
33gb|AE011788.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.1
34gb|AE012253.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 8.1
35gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 8.1
36ref|NM_166474.1| Drosophila melanogaster Tim10 CG9878-RB, transc... 40 8.1
37ref|NM_137762.2| Drosophila melanogaster Tim10 CG9878-RA, transc... 40 8.1
38gb|AY061513.1| Drosophila melanogaster LD46744 full length cDNA 40 8.1
39gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57... 40 8.1
40gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 8.1
41gb|AC007803.7|AC007803 Drosophila melanogaster, chromosome 2R, r... 40 8.1
42gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, r... 40 8.1
43dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
44dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic... 40 8.1
45dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 8.1
46dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.1
47gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 o... 40 8.1
48gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.1
49dbj|AK121625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
50dbj|AK111376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
51gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, com... 40 8.1
52dbj|AK063141.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
53gb|AF150092.1|AF150092 Drosophila melanogaster small zinc finger... 40 8.1
54gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62... 40 8.1
55gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 8.1
56gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, com... 40 8.1
57dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic ... 40 8.1 
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 535     tgccgccgggcaggccgccgccg 557
               |||||||||||||||||||||||
Sbjct: 3049585 tgccgccgggcaggccgccgccg 3049563
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>gb|AC011939.9| Homo sapiens chromosome 15, clone RP11-16E23, complete sequence
          Length = 162964

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 16     acttgatagagtatcaaaaaact 38
              |||||||||||||||||||||||
Sbjct: 121977 acttgatagagtatcaaaaaact 121999
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 539     gccgggcaggccgccgccggtga 561
               |||||||||||||||||||||||
Sbjct: 2123206 gccgggcaggccgccgccggtga 2123228
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>ref|XM_843730.1| PREDICTED: Canis familiaris hypothetical protein LOC607128
            (LOC607128), mRNA
          Length = 2058

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 420  gccctgcgccgccgccggaacgccc 444
            |||||||||||||||||| ||||||
Sbjct: 1406 gccctgcgccgccgccgggacgccc 1382
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>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 538  cgccgggcaggccgccgccgg 558
            |||||||||||||||||||||
Sbjct: 2217 cgccgggcaggccgccgccgg 2197
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 538  cgccgggcaggccgccgccgg 558
            |||||||||||||||||||||
Sbjct: 2217 cgccgggcaggccgccgccgg 2197
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 422     cctgcgccgccgccggaacgc 442
               |||||||||||||||||||||
Sbjct: 2165500 cctgcgccgccgccggaacgc 2165520
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 541    cgggcaggccgccgccggtga 561
              |||||||||||||||||||||
Sbjct: 565340 cgggcaggccgccgccggtga 565360
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>ref|NM_135247.2| Drosophila melanogaster SP1070 CG9138-RA (SP1070), mRNA
          Length = 10489

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 171  ctgggcaaactgcatccacatggcg 195
            |||||||||||||| ||||||||||
Sbjct: 7606 ctgggcaaactgcacccacatggcg 7582
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>gb|AC008326.9| Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
             BACR39J17, complete sequence
          Length = 148780

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 171   ctgggcaaactgcatccacatggcg 195
             |||||||||||||| ||||||||||
Sbjct: 27371 ctgggcaaactgcacccacatggcg 27395
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>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
             BACR13J07, complete sequence
          Length = 174287

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 171   ctgggcaaactgcatccacatggcg 195
             |||||||||||||| ||||||||||
Sbjct: 84073 ctgggcaaactgcacccacatggcg 84097
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>gb|AF239608.1|AF239608 Drosophila melanogaster SP1070 mRNA, complete cds
          Length = 5516

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 171  ctgggcaaactgcatccacatggcg 195
            |||||||||||||| ||||||||||
Sbjct: 1991 ctgggcaaactgcacccacatggcg 1967
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 534    atgccgccgggcaggccgccgccgg 558
              |||||||||||||| ||||||||||
Sbjct: 610682 atgccgccgggcagtccgccgccgg 610658
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>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete
              sequence
          Length = 270751

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 171    ctgggcaaactgcatccacatggcg 195
              |||||||||||||| ||||||||||
Sbjct: 220567 ctgggcaaactgcacccacatggcg 220591
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 422     cctgcgccgccgccggaacgc 442
               |||||||||||||||||||||
Sbjct: 2185403 cctgcgccgccgccggaacgc 2185423
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>ref|XM_468373.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 481 ctgcatgaacaccttctgcccgcgctgtgccccgtc 516
           |||||||||||||||  |||||||||| || |||||
Sbjct: 144 ctgcatgaacaccttgcgcccgcgctgggctccgtc 109
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>ref|XM_469490.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1128

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 414 cacctcgccctgcgccgccgccgg 437
           ||||||||||| ||||||||||||
Sbjct: 558 cacctcgcccttcgccgccgccgg 581
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>gb|AC087181.9| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0018H01
              map R1538, complete sequence
          Length = 142712

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 414    cacctcgccctgcgccgccgccgg 437
              ||||||||||| ||||||||||||
Sbjct: 121905 cacctcgcccttcgccgccgccgg 121928
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>ref|XM_583900.2| PREDICTED: Bos taurus similar to squamous cell carcinoma antigen
            recognized by T cells 2 (LOC538958), mRNA
          Length = 3891

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 36   acttccctccgttttaaaca 55
            ||||||||||||||||||||
Sbjct: 3378 acttccctccgttttaaaca 3359
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>gb|DQ443345.1| Bombyx mori small nuclear ribonucleoprotein protein F mRNA,
           complete cds
          Length = 1102

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 catcttcttcatcagctcct 226
           ||||||||||||||||||||
Sbjct: 759 catcttcttcatcagctcct 740
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>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence
          Length = 262048

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aaaactatggaaacacttga 21
              ||||||||||||||||||||
Sbjct: 100677 aaaactatggaaacacttga 100696
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 414      cacctcgccctgcgccgccgccgg 437
                ||||||||||| ||||||||||||
Sbjct: 28291137 cacctcgcccttcgccgccgccgg 28291114



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 367      gccgccacagattcctctgc 386
                ||||||||||||||||||||
Sbjct: 17109030 gccgccacagattcctctgc 17109049
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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 367    gccgccacagattcctctgc 386
              ||||||||||||||||||||
Sbjct: 139776 gccgccacagattcctctgc 139795
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 462     cgtggcaccccgcgcagacc 481
               ||||||||||||||||||||
Sbjct: 1533058 cgtggcaccccgcgcagacc 1533039
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     ctgcgccgccgccggaacgc 442
               ||||||||||||||||||||
Sbjct: 1816996 ctgcgccgccgccggaacgc 1817015
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>ref|XM_538449.2| PREDICTED: Canis familiaris similar to Interleukin-1 receptor, type
           I precursor (IL-1R-1) (IL-1RT1) (IL-1R-alpha) (p80)
           (Antigen CD121a) (LOC481328), mRNA
          Length = 2193

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 92  gattcatcagcacaaagata 111
           ||||||||||||||||||||
Sbjct: 693 gattcatcagcacaaagata 712
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>ref|XM_805795.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508897.50) partial mRNA
          Length = 3384

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 163  atgtagggctgggcaaactg 182
            ||||||||||||||||||||
Sbjct: 1658 atgtagggctgggcaaactg 1639
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>gb|AC107662.9| Mus musculus chromosome 9, clone RP23-99B22, complete sequence
          Length = 233476

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      aaaactatggaaacacttga 21
              ||||||||||||||||||||
Sbjct: 187170 aaaactatggaaacacttga 187189
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 417     ctcgccctgcgccgccgccg 436
               ||||||||||||||||||||
Sbjct: 1650248 ctcgccctgcgccgccgccg 1650267
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>gb|DQ372923.1| Bacteriophage mu1/6, complete genome
          Length = 38194

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   cgacgatctcggccgactga 408
             ||||||||||||||||||||
Sbjct: 32613 cgacgatctcggccgactga 32632
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence,
           complete sequence
          Length = 153247

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 gccgccacagattcctctgc 386
           ||||||||||||||||||||
Sbjct: 423 gccgccacagattcctctgc 442
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>emb|AL732594.5| Mouse DNA sequence from clone RP24-189G18 on chromosome 4 Contains the
             Prpf4 gene for PRP4 pre-mRNA processing factor 4 homolog
             (yeast), three novel genes, the Bspry gene for B-box and
             SPRY domain containing protein, the Alad gene for delta
             aminolevulinate dehydratase, the Pole3 gene for polymerase
             (DNA directed) epsilon 3 (p17 subunit) and three CpG
             islands, complete sequence
          Length = 145776

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   gccatccggatagtcccaat 164
             ||||||||||||||||||||
Sbjct: 80489 gccatccggatagtcccaat 80508
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>gb|AE011788.1| Xanthomonas axonopodis pv. citri str. 306,  section 166 of 469 of the
            complete genome
          Length = 11856

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  ctgcgccgccgccggaacgc 442
            ||||||||||||||||||||
Sbjct: 9417 ctgcgccgccgccggaacgc 9436
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>gb|AE012253.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 161
           of 460 of the complete genome
          Length = 12627

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 422 cctgcgccgccgccggaacg 441
           ||||||||||||||||||||
Sbjct: 290 cctgcgccgccgccggaacg 309
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 389     cgacgatctcggccgactga 408
               ||||||||||||||||||||
Sbjct: 2146476 cgacgatctcggccgactga 2146457
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>ref|NM_166474.1| Drosophila melanogaster Tim10 CG9878-RB, transcript variant B
           (Tim10), mRNA
          Length = 694

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 catcttcttcatcagctcct 226
           ||||||||||||||||||||
Sbjct: 546 catcttcttcatcagctcct 527
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>ref|NM_137762.2| Drosophila melanogaster Tim10 CG9878-RA, transcript variant A
           (Tim10), mRNA
          Length = 668

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 catcttcttcatcagctcct 226
           ||||||||||||||||||||
Sbjct: 520 catcttcttcatcagctcct 501
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>gb|AY061513.1| Drosophila melanogaster LD46744 full length cDNA
          Length = 679

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 catcttcttcatcagctcct 226
           ||||||||||||||||||||
Sbjct: 520 catcttcttcatcagctcct 501
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>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone
              BACR34C17, complete sequence
          Length = 167447

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    catcttcttcatcagctcct 226
              ||||||||||||||||||||
Sbjct: 146486 catcttcttcatcagctcct 146505
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 422     cctgcgccgccgccggaacg 441
               ||||||||||||||||||||
Sbjct: 3267192 cctgcgccgccgccggaacg 3267173
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>gb|AC007803.7|AC007803 Drosophila melanogaster, chromosome 2R, region 58A1-58A2, BAC clone
              BACR13F14, complete sequence
          Length = 198244

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    catcttcttcatcagctcct 226
              ||||||||||||||||||||
Sbjct: 154981 catcttcttcatcagctcct 154962
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>gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, region 57F-58A, BAC clone
              BACR46G10, complete sequence
          Length = 165158

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    catcttcttcatcagctcct 226
              ||||||||||||||||||||
Sbjct: 107915 catcttcttcatcagctcct 107934
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 414      cacctcgccctgcgccgccgccgg 437
                ||||||||||| ||||||||||||
Sbjct: 28382461 cacctcgcccttcgccgccgccgg 28382438



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 367      gccgccacagattcctctgc 386
                ||||||||||||||||||||
Sbjct: 17102599 gccgccacagattcctctgc 17102618
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>dbj|AB103463.1| Streptomyces sp. AM-7161 medermycin biosynthetic gene cluster (med-ORF1
             - 30) and ORF P - Z , partial and complete cds
          Length = 36202

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 538   cgccgggcaggccgccgccggtga 561
             |||||||||||||| |||||||||
Sbjct: 26566 cgccgggcaggccgacgccggtga 26543
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 538   cgccgggcaggccgccgccg 557
             ||||||||||||||||||||
Sbjct: 83154 cgccgggcaggccgccgccg 83173
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 537     ccgccgggcaggccgccgcc 556
               ||||||||||||||||||||
Sbjct: 3922146 ccgccgggcaggccgccgcc 3922165
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>gb|AE004959.1| Pseudomonas aeruginosa PAO1, section 520 of 529 of the complete
            genome
          Length = 10871

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 535  tgccgccgggcaggccgccgccgg 558
            ||||||||||||||||| ||||||
Sbjct: 4651 tgccgccgggcaggccgacgccgg 4628
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 538     cgccgggcaggccgccgccg 557
               ||||||||||||||||||||
Sbjct: 2417478 cgccgggcaggccgccgccg 2417497
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>dbj|AK121625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046H08, full
           insert sequence
          Length = 1450

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 414 cacctcgccctgcgccgccgccgg 437
           ||||||||||| ||||||||||||
Sbjct: 647 cacctcgcccttcgccgccgccgg 670
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>dbj|AK111376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A12, full
           insert sequence
          Length = 614

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 481 ctgcatgaacaccttctgcccgcgctgtgccccgtc 516
           |||||||||||||||  |||||||||| || |||||
Sbjct: 144 ctgcatgaacaccttgcgcccgcgctgggctccgtc 109
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>gb|AY037858.1| Cercopithicine herpesvirus 15 strain LCL8664, complete genome
          Length = 171096

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   catcttcttcatcagctcct 226
             ||||||||||||||||||||
Sbjct: 60797 catcttcttcatcagctcct 60816
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>dbj|AK063141.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-G09, full
           insert sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 414 cacctcgccctgcgccgccgccgg 437
           ||||||||||| ||||||||||||
Sbjct: 176 cacctcgcccttcgccgccgccgg 199
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>gb|AF150092.1|AF150092 Drosophila melanogaster small zinc finger-like protein (tim10)
           mRNA, complete cds
          Length = 661

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 catcttcttcatcagctcct 226
           ||||||||||||||||||||
Sbjct: 520 catcttcttcatcagctcct 501
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>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete
              sequence
          Length = 313634

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    catcttcttcatcagctcct 226
              ||||||||||||||||||||
Sbjct: 297022 catcttcttcatcagctcct 297041
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 425     gcgccgccgccggaacgcccggcg 448
               ||||||| ||||||||||||||||
Sbjct: 2756625 gcgccgcggccggaacgcccggcg 2756602
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>gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, complete sequence
          Length = 182848

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 416    cctcgccctgcgccgccgccggaa 439
              |||||||||||| |||||||||||
Sbjct: 182683 cctcgccctgcgtcgccgccggaa 182660
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>dbj|AB070952.1| Streptomyces avermitilis peptide-3 biosynthetic gene cluster
          Length = 23451

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 537   ccgccgggcaggccgccgcc 556
             ||||||||||||||||||||
Sbjct: 21016 ccgccgggcaggccgccgcc 20997


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,311,559
Number of Sequences: 3902068
Number of extensions: 4311559
Number of successful extensions: 87317
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85460
Number of HSP's gapped (non-prelim): 1857
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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