Clone Information

BLAST Search Result

Clone Name	rbasd21e17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1...	55	2e-07
2	IMDH_PYRFU (P42851) Inosine-5'-monophosphate dehydrogenase (EC 1...	50	6e-06
3	IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1...	49	1e-05
4	IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1...	49	1e-05
5	Y1426_METJA (Q58821) Hypothetical protein MJ1426	48	2e-05
6	Y922_METJA (Q58332) Hypothetical protein MJ0922	47	6e-05
7	Y100_METJA (Q57564) Hypothetical protein MJ0100	45	2e-04
8	IMDH_BACHD (Q9KGN8) Inosine-5'-monophosphate dehydrogenase (EC 1...	43	7e-04
9	IMDH_MYCTU (P65167) Inosine-5'-monophosphate dehydrogenase (EC 1...	43	0.001
10	IMDH_MYCLE (Q49729) Inosine-5'-monophosphate dehydrogenase (EC 1...	43	0.001
11	IMDH_MYCBO (P65168) Inosine-5'-monophosphate dehydrogenase (EC 1...	43	0.001
12	Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)	42	0.001
13	YNI1_METIV (P25768) Hypothetical protein in nifH2 5'region (Frag...	41	0.004
14	Y1678_HAEIN (P45313) Probable phosphosugar isomerase HI1678 (EC ...	40	0.005
15	IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1...	40	0.006
16	YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'regi...	40	0.008
17	YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I	40	0.008
18	Y1404_METJA (Q58799) Hypothetical protein MJ1404	39	0.018
19	IMDH_DROME (Q07152) Inosine-5'-monophosphate dehydrogenase (EC 1...	37	0.067
20	YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal R...	36	0.11
21	YHCV_BACSU (P54606) Hypothetical protein yhcV	36	0.11
22	IMDH_TRIFO (P50097) Inosine-5'-monophosphate dehydrogenase (EC 1...	34	0.33
23	Y1004_METJA (Q58410) Hypothetical protein MJ1004	34	0.33
24	GUTQ_ECOLI (P17115) Protein gutQ	34	0.43
25	AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 su...	33	0.97
26	OPUBA_BACSU (Q45460) Choline transport ATP-binding protein opuBA	33	0.97
27	AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 su...	32	1.3
28	AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 su...	32	1.3
29	Y1546_AQUAE (O67500) Hypothetical phosphosugar isomerase aq_1546	32	1.7
30	IMDH2_MOUSE (P24547) Inosine-5'-monophosphate dehydrogenase 2 (E...	32	2.2
31	IMDH2_HUMAN (P12268) Inosine-5'-monophosphate dehydrogenase 2 (E...	32	2.2
32	IMDH2_CRIGR (P12269) Inosine-5'-monophosphate dehydrogenase 2 (E...	31	2.8
33	AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 su...	31	3.7
34	AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subu...	31	3.7
35	AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subu...	31	3.7
36	AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 su...	31	3.7
37	AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 su...	31	3.7
38	Y1225_METJA (Q58622) Hypothetical protein MJ1225	30	4.8
39	Y505_RICPR (Q9ZD42) Hypothetical protein RP505	30	4.8
40	IMDH_PASMU (Q9L6B7) Inosine-5'-monophosphate dehydrogenase (EC 1...	30	6.3
41	IMDH1_HUMAN (P20839) Inosine-5'-monophosphate dehydrogenase 1 (E...	30	8.2

>IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 496

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAAALMLKK 458
           +SGLPVVD+  + VG++   D  +A      K+ DVMT   +    D    +A  LM   
Sbjct: 121 ISGLPVVDNEDKLVGIITHRD-VKAIEDKTKKVKDVMTKDVVCAKEDVEEEEALELMYAN 179

Query: 457 KIHRLPIVNQDNQVIG 410
           ++ RLPIV+ +N++IG
Sbjct: 180 RVERLPIVDDENRLIG 195

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>IMDH_PYRFU (P42851) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 485

 Score = 50.1 bits (118), Expect = 6e-06
 Identities = 29/76 (38%), Positives = 46/76 (60%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAAALMLKK 458
           + GLPVV+  R  VG++ K D A A  G   K  ++MT   IT+     V +A  +M++ 
Sbjct: 124 IDGLPVVEEDR-VVGIITKKDIA-AREGRTVK--ELMTREVITVPESVDVEEALKIMMEN 179

Query: 457 KIHRLPIVNQDNQVIG 410
           +I RLP+VN+D +++G
Sbjct: 180 RIDRLPVVNEDGKLVG 195

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>IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 481

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTS-PAITLSCDKTVTDAAALMLK 461
           +SG+PVVD     +G++   D  R       K+ DVMT  P +T     ++ +A+ LM K
Sbjct: 117 ISGVPVVDDKGLLIGILTNRD-VRFETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHK 175

Query: 460 KKIHRLPIVNQDNQVIG 410
            KI +LPIV++DN + G
Sbjct: 176 HKIEKLPIVDKDNVLKG 192

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>IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 481

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTS-PAITLSCDKTVTDAAALMLK 461
           +SG+PVVD     +G++   D  R       K+ DVMT  P +T     ++ +A+ LM K
Sbjct: 117 ISGVPVVDDKGLLIGILTNRD-VRFETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHK 175

Query: 460 KKIHRLPIVNQDNQVIG 410
            KI +LPIV++DN + G
Sbjct: 176 HKIEKLPIVDKDNVLKG 192

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>Y1426_METJA (Q58821) Hypothetical protein MJ1426|
          Length = 168

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 22/47 (46%), Positives = 30/47 (63%)
 Frame = -3

Query: 550 RTKIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQVIG 410
           +TK+ DVMT   I    D T+ DAA LM+K  I RLP+V+ +  +IG
Sbjct: 110 KTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIG 156

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>Y922_METJA (Q58332) Hypothetical protein MJ0922|
          Length = 138

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSD----RARASHGSRTKIADVMTSPAITLSCDKTVTDAAAL 470
           +S LPV+D   + +G+V  +D      R  +   T I DVMT   IT+  D ++ +A   
Sbjct: 39  ISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHEDASILEAIKK 98

Query: 469 M-----LKKKIHRLPIVNQDNQVIG 410
           M      ++ I++LP+V+++N+++G
Sbjct: 99  MDISGKKEEIINQLPVVDKNNKLVG 123



 Score = 40.4 bits (93), Expect = 0.005
 Identities = 20/45 (44%), Positives = 28/45 (62%)
 Frame = -3

Query: 544 KIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQVIG 410
           K+ DVMT   IT    + V +A   MLK KI  LP+++ +N+VIG
Sbjct: 9   KVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIG 53

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>Y100_METJA (Q57564) Hypothetical protein MJ0100|
          Length = 509

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 24/76 (31%), Positives = 41/76 (53%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAAALMLKK 458
           ++ LP+VD   + VG++   D A+A   ++  I ++MT   IT   D+ V   A  M K 
Sbjct: 419 INHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAHEDEPVDHVAIKMSKY 478

Query: 457 KIHRLPIVNQDNQVIG 410
            I  +P+V+   +V+G
Sbjct: 479 NISGVPVVDDYRRVVG 494



 Score = 32.0 bits (71), Expect = 1.7
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSR 548
           +SG+PVVD  RR VG+V   D +R   G +
Sbjct: 480 ISGVPVVDDYRRVVGIVTSEDISRLFGGKK 509

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>IMDH_BACHD (Q9KGN8) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 485

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSP-AITLSCDKTVTDAAALMLK 461
           +SG+P+VD  ++ VG++   D  R      T I DVMT    +T     T+ +A  ++ K
Sbjct: 120 ISGVPIVDEDQKLVGILTNRD-LRFIEDYSTLIDDVMTKENLVTAPVGTTLKEAEEILQK 178

Query: 460 KKIHRLPIVNQDNQVIG 410
            KI +LP+V++   + G
Sbjct: 179 HKIEKLPLVDESGTLKG 195

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>IMDH_MYCTU (P65167) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 529

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMT-SPAITLSCDKTVTDAAALMLK 461
           +SGLPVVD     VG++   D  R       ++A+VMT +P IT     + + A  L+ +
Sbjct: 154 ISGLPVVDDDGALVGIITNRD-MRFEVDQSKQVAEVMTKAPLITAQEGVSASAALGLLRR 212

Query: 460 KKIHRLPIVNQDNQVIG 410
            KI +LP+V+   ++ G
Sbjct: 213 NKIEKLPVVDGRGRLTG 229

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>IMDH_MYCLE (Q49729) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 529

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAA-ALMLK 461
           +SGLPVVD +    G++   D  R       ++A+VMT   +  + +    DAA  L+ +
Sbjct: 154 ISGLPVVDDSGALAGIITNRD-MRFEVDQSKQVAEVMTKTPLITAAEGVSADAALGLLRR 212

Query: 460 KKIHRLPIVNQDNQVIG 410
            KI +LP+V+   ++ G
Sbjct: 213 NKIEKLPVVDGHGRLTG 229

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>IMDH_MYCBO (P65168) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 529

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMT-SPAITLSCDKTVTDAAALMLK 461
           +SGLPVVD     VG++   D  R       ++A+VMT +P IT     + + A  L+ +
Sbjct: 154 ISGLPVVDDDGALVGIITNRD-MRFEVDQSKQVAEVMTKAPLITAQEGVSASAALGLLRR 212

Query: 460 KKIHRLPIVNQDNQVIG 410
            KI +LP+V+   ++ G
Sbjct: 213 NKIEKLPVVDGRGRLTG 229

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>Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)|
          Length = 196

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDR-----ARASHGSRTKIADVMTSPAITLSCDKTVTDAAA 473
           +  + +V+     +G++ + D      ++  +       D+M+ P IT+  D  V +A  
Sbjct: 35  IGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQPVITVEEDMEVNEAVK 94

Query: 472 LMLKKKIHRLPIVNQDNQVIG 410
           LM+ K I RLPIV+ + ++IG
Sbjct: 95  LMVDKGIRRLPIVDDNGKLIG 115

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>YNI1_METIV (P25768) Hypothetical protein in nifH2 5'region (Fragment)|
          Length = 96

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 16/43 (37%), Positives = 31/43 (72%)
 Frame = -3

Query: 541 IADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQVI 413
           + ++MT    T   D +++DAAALM K  ++RLP+V+++N+++
Sbjct: 53  VGEIMTKKVRTTKKDASISDAAALMDKHNVNRLPVVDENNKLV 95

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>Y1678_HAEIN (P45313) Probable phosphosugar isomerase HI1678 (EC 5.-.-.-)|
          Length = 337

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
 Frame = -3

Query: 631 GLPVVDSARRCVGVVVKSDRARA----SHGSRTKIA-DVMTSPAITLSCDKTVTDAAALM 467
           G+ +V    +  G++   D  RA      G+  K A D MTS   T+  D+ ++ A   M
Sbjct: 253 GVALVMENEQLKGIITDGDIRRALTANGAGTLNKTAKDFMTSSPKTIHQDEFLSKAEDFM 312

Query: 466 LKKKIHRLPIVNQDNQVIG 410
             KKIH L +VN +N V+G
Sbjct: 313 KAKKIHSLVVVNDENHVVG 331

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>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 490

 Score = 40.0 bits (92), Expect = 0.006
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTK-IADVMTSP-AITLSCDKTVTDAAALML 464
           +SG+PVVD  R+ +G++   D         +K +++ MT    IT     T+ +A  +  
Sbjct: 121 ISGVPVVDEERKLIGILTNRDLRFIKPEDYSKPVSEFMTKENLITAPEGITLDEAEEIFR 180

Query: 463 KKKIHRLPIVNQDNQVIG 410
           K KI +LPIV+++ ++ G
Sbjct: 181 KYKIEKLPIVDKEGKIKG 198

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>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)|
          Length = 164

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSD--RARASHGSRTKIADVMTSPAITLSCDKTVTDAAALML 464
           +  L V+DS  R VG++ + D  +A ++    + +   MT     ++ D  VTDA  +ML
Sbjct: 34  LGSLVVIDSQNRVVGIITERDIVKAASNRDIDSPVEKYMTKDVKGVTEDTEVTDALDIML 93

Query: 463 KKKIHRLPIVNQDNQVIG 410
                 LPI+  + ++ G
Sbjct: 94  NNGFRHLPIIKSNGKLYG 111

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>YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I|
          Length = 730

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = -3

Query: 622 VVDSARRCVGVVVKSDRARASHGS-----RTKIADVMTSPAITLSCDKTVTDAAALMLKK 458
           VVD   +  G+V  +D A    G+     +T IAD+M++  + ++ D    DA  LM++ 
Sbjct: 99  VVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSPLCITSDTRFDDALLLMIEH 158

Query: 457 KIHRLPIVN 431
           K   LP+V+
Sbjct: 159 KFRHLPVVS 167

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>Y1404_METJA (Q58799) Hypothetical protein MJ1404|
          Length = 421

 Score = 38.5 bits (88), Expect = 0.018
 Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = -3

Query: 625 PVVDSARRCVGVVVKSD-RARASHGS---RTKIADVMTSPAITLSCDKTVTDAAALMLKK 458
           P+V++  + VG++   D  ARA+       TK+  +MT   IT++ + ++  A ALM   
Sbjct: 103 PIVNNVGKMVGIITDYDIMARAAKSKIMKDTKVTKIMTRNVITINENDSIGKARALMRDN 162

Query: 457 KIHRLPIVNQDNQVIG 410
            I RL +V+ +   +G
Sbjct: 163 NIGRLVVVDDEGNPVG 178

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>IMDH_DROME (Q07152) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD) (Protein raspberry)
          Length = 537

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
 Frame = -3

Query: 634 SGLPVVDSAR---RCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAAALML 464
           +G PV ++ +   + +G+V   D     +     +AD+MT+  +T      +  A A++ 
Sbjct: 162 TGYPVTENGKLGGKLLGMVTSRDIDFRENQPEVLLADIMTTELVTAPNGINLPTANAILE 221

Query: 463 KKKIHRLPIVNQDNQVI 413
           K K  +LPIVNQ  +++
Sbjct: 222 KSKKGKLPIVNQAGELV 238

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>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon|
          Length = 300

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSD--RARASHGSRTKIADVMTSPAITLSCDKTVTDAAALML 464
           +  L VVD   R VG+V +       A+  +  K+ ++MTS  + LS   ++ +   +M 
Sbjct: 114 IGALAVVDEDLRVVGIVSERHVISLLANVETHVKVKEIMTSEVVYLSPMDSLFEGMRVMS 173

Query: 463 KKKIHRLPIVN 431
           +++I RLP+V+
Sbjct: 174 ERRIRRLPLVS 184

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>YHCV_BACSU (P54606) Hypothetical protein yhcV|
          Length = 140

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 16/45 (35%), Positives = 33/45 (73%)
 Frame = -3

Query: 550 RTKIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQV 416
           +T +++VM++  ++ + + ++ DA+ LM + +I RLPIV+Q+N V
Sbjct: 65  QTPVSEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNLV 109

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>IMDH_TRIFO (P50097) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 503

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
 Frame = -3

Query: 598 VGVVVKSDRARASHGSRTKIADVMT--SPAITLSCDKTVTDAAALMLKKKIHRLPIVNQD 425
           +G+V + D       + TK++D+MT  S  +T   D  +++A  ++ +KK++ LPI++ D
Sbjct: 144 LGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD 203

Query: 424 NQV 416
             +
Sbjct: 204 QHL 206

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>Y1004_METJA (Q58410) Hypothetical protein MJ1004|
          Length = 214

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 16/45 (35%), Positives = 28/45 (62%)
 Frame = -3

Query: 544 KIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQVIG 410
           K+ D+M      +  D+TV DA  L+ KKK    PIV+++++++G
Sbjct: 2   KVRDLMDKNFAKIYVDETVEDAINLLKKKKRFSAPIVDKEDRLVG 46

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>GUTQ_ECOLI (P17115) Protein gutQ|
          Length = 321

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = -3

Query: 622 VVDSARRCVGVVVKSDRARASHGS---RTKIADVMTSPAITLSCDKTVTDAAALMLKKKI 452
           V D+ ++  GV    D  R   G     T + + MT    TL       DA  +++K+KI
Sbjct: 235 VCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKI 294

Query: 451 HRLPIVNQDNQVIG 410
              P+V+++ ++ G
Sbjct: 295 TAAPVVDENGKLTG 308

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>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 524

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVN 431
           P + +S D ++ DA   ++K KIHRLP+++
Sbjct: 315 PLVNISPDASLLDAVYSLIKNKIHRLPVID 344



 Score = 30.0 bits (66), Expect = 6.3
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAI---------TLSCDK--- 494
           +S LPVVD + + V +  K D    +        D+  + A+          + C+K   
Sbjct: 412 ISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEI 471

Query: 493 --TVTDAAALMLKKKIHRLPIVNQDNQVIG 410
             T+ D    +++ ++HRL + N+ + ++G
Sbjct: 472 LETIVDR---IVRAEVHRLVVANEADSIVG 498

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>OPUBA_BACSU (Q45460) Choline transport ATP-binding protein opuBA|
          Length = 381

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 12/45 (26%), Positives = 29/45 (64%)
 Frame = -3

Query: 544 KIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQVIG 410
           ++  +M +  +T++ DKT+++A  LM ++++  L +VN +  + G
Sbjct: 251 RVDQIMNTQPVTITADKTLSEAIQLMRQERVDSLLVVNDERVLQG 295

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>AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 566

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAI---------TLSCDK--T 491
           +S LPVVD + + V +  K D    +        D+  + A+          + C K  T
Sbjct: 454 ISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCSKLET 513

Query: 490 VTDAAALMLKKKIHRLPIVNQDNQVIG 410
           +      +++ ++HRL +VN+ + ++G
Sbjct: 514 LETIVDRIVRAEVHRLVVVNEADSIVG 540



 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVN 431
           P + +S D ++ DA   ++K KIHRLP+++
Sbjct: 357 PLVNISPDASLFDAVYSLIKNKIHRLPVID 386

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>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2) (H91620p)
          Length = 569

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVN 431
           P + +S D ++ DA   ++K KIHRLP+++
Sbjct: 360 PLVNISPDASLFDAVYSLIKNKIHRLPVID 389



 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
 Frame = -3

Query: 637 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAI---------TLSCDK--- 494
           +S LPVVD + + V +  K D    +        D+  + A+          + C+K   
Sbjct: 457 ISALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITVTQALQHRSQYFEGVVKCNKLEI 516

Query: 493 --TVTDAAALMLKKKIHRLPIVNQDNQVIG 410
             T+ D    +++ ++HRL +VN+ + ++G
Sbjct: 517 LETIVDR---IVRAEVHRLVVVNEADSIVG 543

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>Y1546_AQUAE (O67500) Hypothetical phosphosugar isomerase aq_1546|
          Length = 322

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
 Frame = -3

Query: 622 VVDSARRCVGVVVKSDRARASH--GS--RTKIADVMTSPAITLSCDKTVTDAAALMLKKK 455
           VV+   + VG++   D  R  +  GS   T+  DVMT    T+  D+    A   M    
Sbjct: 235 VVNEEGKLVGIITDGDLRRFVNRGGSFENTRAKDVMTKNPKTIKPDELALKALRKMEDHN 294

Query: 454 IHRLPIVNQDNQVIG 410
           I  L +VN++N+ IG
Sbjct: 295 ITVLIVVNEENEPIG 309

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>IMDH2_MOUSE (P24547) Inosine-5'-monophosphate dehydrogenase 2 (EC 1.1.1.205)|
           (IMP dehydrogenase 2) (IMPDH-II) (IMPD 2)
          Length = 514

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
 Frame = -3

Query: 631 GLPVVDSAR---RCVGVVVKSD--------RARASHGSRTKIADVMTSPAITLSCDKTVT 485
           G+P+ D+ R   R VG++   D          R      TK  D++ +PA       T+ 
Sbjct: 141 GIPITDTGRMGSRLVGIISSRDIDFLKEEEHDRFLEEIMTKREDLVVAPA-----GVTLK 195

Query: 484 DAAALMLKKKIHRLPIVNQDNQVI 413
           +A  ++ + K  +LPIVN++++++
Sbjct: 196 EANEILQRSKKGKLPIVNENDELV 219

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>IMDH2_HUMAN (P12268) Inosine-5'-monophosphate dehydrogenase 2 (EC 1.1.1.205)|
           (IMP dehydrogenase 2) (IMPDH-II) (IMPD 2)
          Length = 514

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
 Frame = -3

Query: 631 GLPVVDSAR---RCVGVVVKSD---RARASHGS-----RTKIADVMTSPAITLSCDKTVT 485
           G+P+ D+ R   R VG++   D        H        TK  D++ +PA       T+ 
Sbjct: 141 GIPITDTGRMGSRLVGIISSRDIDFLKEEEHDCFLEEIMTKREDLVVAPA-----GITLK 195

Query: 484 DAAALMLKKKIHRLPIVNQDNQVI 413
           +A  ++ + K  +LPIVN+D++++
Sbjct: 196 EANEILQRSKKGKLPIVNEDDELV 219

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>IMDH2_CRIGR (P12269) Inosine-5'-monophosphate dehydrogenase 2 (EC 1.1.1.205)|
           (IMP dehydrogenase 2) (IMPDH-II) (IMPD 2)
          Length = 514

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
 Frame = -3

Query: 631 GLPVVDSAR---RCVGVVVKSD--------RARASHGSRTKIADVMTSPAITLSCDKTVT 485
           G+P+ D+ R   R VG++   D          R      TK  D++ +PA       T+ 
Sbjct: 141 GIPITDTGRMGSRLVGIISSRDIDFLKEEEHDRFLEEIMTKREDLVVAPA-----GITLK 195

Query: 484 DAAALMLKKKIHRLPIVNQDNQVI 413
           +A  ++ + K  +LPIVN++++++
Sbjct: 196 EANEILQRSKKGKLPIVNENDELV 219

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>AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 331

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVNQDN 422
           P + +S + ++ DA + +++ KIHRLP+++ ++
Sbjct: 128 PLVCISPNASLFDAVSSLIRNKIHRLPVIDPES 160

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>AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVNQDN 422
           P + +S + ++ DA + +++ KIHRLP+++ ++
Sbjct: 127 PLVCISPNASLFDAVSSLIRNKIHRLPVIDPES 159

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>AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg) (38 kDa subunit)
          Length = 330

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVNQDN 422
           P + +S + ++ DA + +++ KIHRLP+++ ++
Sbjct: 128 PLVCISPNASLFDAVSSLIRNKIHRLPVIDPES 160

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>AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVNQDN 422
           P + +S + ++ DA + +++ KIHRLP+++ ++
Sbjct: 127 PLVCISPNASLFDAVSSLIRNKIHRLPVIDPES 159

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>AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 10/33 (30%), Positives = 24/33 (72%)
 Frame = -3

Query: 520 PAITLSCDKTVTDAAALMLKKKIHRLPIVNQDN 422
           P + +S + ++ DA + +++ KIHRLP+++ ++
Sbjct: 128 PLVCISPNASLFDAVSSLIRNKIHRLPVIDPES 160

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>Y1225_METJA (Q58622) Hypothetical protein MJ1225|
          Length = 280

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -3

Query: 541 IADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIVNQDNQVI 413
           + ++M    ITL  +  + +A    L K +   PIVN +NQ+I
Sbjct: 86  VREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLI 128

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>Y505_RICPR (Q9ZD42) Hypothetical protein RP505|
          Length = 319

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -3

Query: 622 VVDSARRCVGVVVKSDRARASHGS--RTKIADVMTSPAITLSCDKTVTDAAALMLKKKIH 449
           V D  +  +G++   D  R  H        + +MT     +S +    +A  LM  K I 
Sbjct: 235 VTDKEQNLIGIITDGDLRRNIHDQIHLKTASSIMTKNPHYISSEIFAQEALNLMKAKNIT 294

Query: 448 RLPIVNQDNQVIG 410
            +PIV+ DN +IG
Sbjct: 295 NIPIVD-DNIIIG 306

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>IMDH_PASMU (Q9L6B7) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 487

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
 Frame = -3

Query: 634 SGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPA--ITLSCDKTVTDAAALMLK 461
           +  PVVD  +  VG++   D    +  ++T +AD MT  A  +T+  + +  +   LM  
Sbjct: 119 ASFPVVDDEKNLVGIITGRDTRFVTDLNKT-VADFMTPKARLVTVKRNASRDEIFGLMHT 177

Query: 460 KKIHRLPIVNQDNQVIG 410
            ++ ++ +V+ D ++ G
Sbjct: 178 HRVEKVLVVSDDFKLKG 194

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>IMDH1_HUMAN (P20839) Inosine-5'-monophosphate dehydrogenase 1 (EC 1.1.1.205)|
           (IMP dehydrogenase 1) (IMPDH-I) (IMPD 1)
          Length = 514

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
 Frame = -3

Query: 634 SGLPVVDSAR---RCVGVVVKSDRARASHGSRTKIADVMTSPAITL---SCDKTVTDAAA 473
           SG+P+ ++     + VG+V   D    +    T +   + +P I L       T+ +A  
Sbjct: 140 SGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIELVVAPAGVTLKEANE 199

Query: 472 LMLKKKIHRLPIVNQDNQVI 413
           ++ + K  +LPIVN  ++++
Sbjct: 200 ILQRSKKGKLPIVNDCDELV 219


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,201,228
Number of Sequences: 219361
Number of extensions: 1804978
Number of successful extensions: 4351
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4346
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result