| Clone Name | rbasd20p05 |
|---|---|
| Clone Library Name | barley_pub |
>TPP1_SCHPO (P78875) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate| phosphatase) (TPP) Length = 817 Score = 46.6 bits (109), Expect = 4e-05 Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%) Frame = -2 Query: 486 LPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVG--RKPSKAKYYLDDTADI 313 LP FI C GDDR+DEDMF + +N E FA T+G +K S A + + D A++ Sbjct: 750 LPSFIFCAGDDRTDEDMFRSLH---KNTRINKETS-FAVTIGSDKKLSIADWCIADPANV 805 Query: 312 VRLIQALANVSD 277 + ++ LAN ++ Sbjct: 806 IDILADLANFTN 817
>TPS2_YEAST (P31688) Trehalose-phosphatase (EC 3.1.3.12) (Trehalose 6-phosphate| phosphatase) (TPP) (Trehalose synthase complex catalytic subunit TPS2) Length = 896 Score = 38.5 bits (88), Expect = 0.010 Identities = 14/23 (60%), Positives = 19/23 (82%) Frame = -2 Query: 486 LPDFILCIGDDRSDEDMFEVITT 418 +PDF+LC+GDD +DEDMF + T Sbjct: 772 MPDFVLCLGDDFTDEDMFRQLNT 794
>SYC_METCA (Q60BG8) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 465 Score = 35.0 bits (79), Expect = 0.11 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 1/91 (1%) Frame = -2 Query: 495 RGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVGRKPSKAKYYLD-DTA 319 RGL PD L +G+DR DE A+ + PEA + R+ ++ K A Sbjct: 324 RGLAPDLPLPLGEDR-DEGFSSRFADAMQDDFNTPEAIAVLFDLAREINRHKAAEPAKAA 382 Query: 318 DIVRLIQALANVSDEVQGGPPSYFFACAGTS 226 + +++L NV +Q P +YF + AG S Sbjct: 383 ALGATLKSLGNVLGLLQTDPEAYFKSDAGGS 413
>TPP_ENCCU (Q8SSL0) Probable trehalose-phosphatase (EC 3.1.3.12) (Trehalose| 6-phosphate phosphatase) (TPP) Length = 718 Score = 33.5 bits (75), Expect = 0.33 Identities = 20/62 (32%), Positives = 29/62 (46%) Frame = -2 Query: 477 FILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVGRKPSKAKYYLDDTADIVRLIQ 298 F+LC GDD +DEDMF+V K + VG + + A Y + D + L+ Sbjct: 668 FVLCAGDDVADEDMFDV-------------CKGYTIKVGDQSTSAAYRVKDPENFRMLLG 714 Query: 297 AL 292 L Sbjct: 715 RL 716
>PYRG_MYCCT (Q48965) CTP synthase (EC 6.3.4.2) (UTP--ammonia ligase) (CTP| synthetase) Length = 532 Score = 30.8 bits (68), Expect = 2.2 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%) Frame = -2 Query: 504 MQARGLLPDFILCIGDDRSDEDMFEVITTAVDGPYLNPEAKVFACTVGRKP-SKAKYYLD 328 M + G+ PD I+C D S +D+ E I+ + P N + ++ R P + AK L Sbjct: 199 MASLGIQPDVIVCRSDSSSPKDIKEKISLFCNVPITNIIDAIDQDSIYRVPLALAKQNLQ 258 Query: 327 DTADIVRLIQALANVSD 277 D I+ +Q AN D Sbjct: 259 DI--IIEQLQLKANAID 273
>PAR6G_HUMAN (Q9BYG4) Partitioning defective 6 homolog gamma (PAR-6 gamma)| (PAR6D) Length = 376 Score = 30.4 bits (67), Expect = 2.8 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%) Frame = +1 Query: 4 ESMYTTAKQQHHHDNDDRPLL-------LLILKHSTRLCEPTARSISP--RVFPEARSYS 156 E Y HH N D + LL + + C+ + S +P RVF + R + Sbjct: 43 EDFYKLVVHTHHISNSDVTIGYADVHGDLLPINNDDNFCKAVS-SANPLLRVFIQKREEA 101 Query: 157 GRGCAGAGLLCR 192 RG GAG LCR Sbjct: 102 ERGSLGAGSLCR 113
>CAPP_THET8 (Q5SKL7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 858 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = -2 Query: 300 QALANVSDEVQGGPPSYFFACAGTSTDDRALN*GGKPAKKTSTSTAPA*IRPRFR 136 +AL+ V +EV G P YFF GTST GG PA + S P + R R Sbjct: 547 EALSRVGEEV--GLPVYFFHGRGTSTAR-----GGGPAGRAIASLPPRSVGRRIR 594
>CAPP_THET2 (Q72L05) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 858 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/55 (40%), Positives = 27/55 (49%) Frame = -2 Query: 300 QALANVSDEVQGGPPSYFFACAGTSTDDRALN*GGKPAKKTSTSTAPA*IRPRFR 136 +AL+ V +EV G P YFF GTST GG PA + S P + R R Sbjct: 547 EALSRVGEEV--GLPVYFFHGRGTSTAR-----GGGPAGRAIASLPPRSVGRRIR 594 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,452,137 Number of Sequences: 219361 Number of extensions: 1068467 Number of successful extensions: 3156 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3154 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)