>gb|DQ132851.1| Oryza sativa (japonica cultivar-group) sulfiredoxin-like protein
           mRNA, complete cds
          Length = 465

 Score =  220 bits (111), Expect = 4e-54
 Identities = 237/279 (84%)
 Strand = Plus / Minus

                                                                       
Query: 130 tcatcgcatatggtgccgcagtgtttctttggtccctcggcggactttgcagcggatggt 189
           |||||||||||||||||  ||||||||||| ||||| || ||||||||||||||||| ||
Sbjct: 465 tcatcgcatatggtgccttagtgtttctttcgtcccgcgacggactttgcagcggatagt 406

                                                                       
Query: 190 tgggagtcctaggcgctggtgagcctcgtatcgatggcatccagagaatccgtagtagac 249
            ||||| |||||||||||||||||||| || || || |||||||| || || ||||||||
Sbjct: 405 cgggagacctaggcgctggtgagcctcatagcggtgacatccagaaaaaccatagtagac 346

                                                                       
Query: 250 tccgtcgacttccagcacgtcgataggtacttggaggccgatgacacggatgctgtccat 309
           ||| || || ||||| ||||| ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 345 tccatcaacctccagtacgtcaataggtacttggaggccaatgacacggatactgtccat 286

                                                                       
Query: 310 gagctcctgcaccttctcaggatcgttagcacgcgttcgcattagcggcctacggatatc 369
           ||| || ||||||||  | ||||| || |||||||| ||||| || ||||| |  || | 
Sbjct: 285 gagttcttgcaccttggctggatcattggcacgcgtccgcatcagtggcctcctaatctt 226

                                                  
Query: 370 ttccagcgggatctccatcaccacagggcctttcttctc 408
            ||||| || || ||||||||||||||||| ||||||||
Sbjct: 225 gtccagtggaatttccatcaccacagggcccttcttctc 187

>ref|NM_185676.1| Oryza sativa (japonica cultivar-group), Ozsa8027 predicted mRNA
          Length = 426

 Score =  198 bits (100), Expect = 1e-47
 Identities = 220/260 (84%)
 Strand = Plus / Minus

                                                                       
Query: 149 agtgtttctttggtccctcggcggactttgcagcggatggttgggagtcctaggcgctgg 208
           ||||||||||| ||||| || ||||||||||||||||| || ||||| ||||||||||||
Sbjct: 410 agtgtttctttcgtcccgcgacggactttgcagcggatagtcgggagacctaggcgctgg 351

                                                                       
Query: 209 tgagcctcgtatcgatggcatccagagaatccgtagtagactccgtcgacttccagcacg 268
           |||||||| || || || |||||||| || || ||||||||||| || || ||||| |||
Sbjct: 350 tgagcctcatagcggtgacatccagaaaaaccatagtagactccatcaacctccagtacg 291

                                                                       
Query: 269 tcgataggtacttggaggccgatgacacggatgctgtccatgagctcctgcaccttctca 328
           || ||||||||||||||||| ||||||||||| ||||||||||| || ||||||||  | 
Sbjct: 290 tcaataggtacttggaggccaatgacacggatactgtccatgagttcttgcaccttggct 231

                                                                       
Query: 329 ggatcgttagcacgcgttcgcattagcggcctacggatatcttccagcgggatctccatc 388
           ||||| || |||||||| ||||| || ||||| |  || |  ||||| || || ||||||
Sbjct: 230 ggatcattggcacgcgtccgcatcagtggcctcctaatcttgtccagtggaatttccatc 171

                               
Query: 389 accacagggcctttcttctc 408
           ||||||||||| ||||||||
Sbjct: 170 accacagggcccttcttctc 151

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                           
Query: 274     aggtacttggaggccgatgacacggatgctgtccatgagctcctgcaccttctcaggatc 333
               ||||||||||||||| ||||||||||| ||||||||||| || ||||||||  | |||||
Sbjct: 3759839 aggtacttggaggccaatgacacggatactgtccatgagttcttgcaccttggctggatc 3759780

                                                                           
Query: 334     gttagcacgcgttcgcattagcggcctacggatatcttccagcgggatctccatcaccac 393
                || |||||||| ||||| || ||||| |  || |  ||||| || || |||||||||||
Sbjct: 3759779 attggcacgcgtccgcatcagtggcctcctaatcttgtccagtggaatttccatcaccac 3759720

                              
Query: 394     agggcctttcttctc 408
               |||||| ||||||||
Sbjct: 3759719 agggcccttcttctc 3759705



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                           
Query: 149     agtgtttctttggtccctcggcggactttgcagcggatggttgggagtcctaggcgctgg 208
               ||||||||||| ||||| || ||||||||||||||||| || ||||| ||||||||||||
Sbjct: 3760857 agtgtttctttcgtcccgcgacggactttgcagcggatagtcgggagacctaggcgctgg 3760798

                                         
Query: 209     tgagcctcgtatcgatggcatccaga 234
               |||||||| || || || ||||||||
Sbjct: 3760797 tgagcctcatagcggtgacatccaga 3760772

>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0014B15
          Length = 158821

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                          
Query: 274    aggtacttggaggccgatgacacggatgctgtccatgagctcctgcaccttctcaggatc 333
              ||||||||||||||| ||||||||||| ||||||||||| || ||||||||  | |||||
Sbjct: 154067 aggtacttggaggccaatgacacggatactgtccatgagttcttgcaccttggctggatc 154008

                                                                          
Query: 334    gttagcacgcgttcgcattagcggcctacggatatcttccagcgggatctccatcaccac 393
               || |||||||| ||||| || ||||| |  || |  ||||| || || |||||||||||
Sbjct: 154007 attggcacgcgtccgcatcagtggcctcctaatcttgtccagtggaatttccatcaccac 153948

                             
Query: 394    agggcctttcttctc 408
              |||||| ||||||||
Sbjct: 153947 agggcccttcttctc 153933



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                          
Query: 149    agtgtttctttggtccctcggcggactttgcagcggatggttgggagtcctaggcgctgg 208
              ||||||||||| ||||| || ||||||||||||||||| || ||||| ||||||||||||
Sbjct: 155085 agtgtttctttcgtcccgcgacggactttgcagcggatagtcgggagacctaggcgctgg 155026

                                        
Query: 209    tgagcctcgtatcgatggcatccaga 234
              |||||||| || || || ||||||||
Sbjct: 155025 tgagcctcatagcggtgacatccaga 155000

>dbj|AP002069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0015E04
          Length = 152046

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 113/135 (83%)
 Strand = Plus / Minus

                                                                         
Query: 274   aggtacttggaggccgatgacacggatgctgtccatgagctcctgcaccttctcaggatc 333
             ||||||||||||||| ||||||||||| ||||||||||| || ||||||||  | |||||
Sbjct: 17793 aggtacttggaggccaatgacacggatactgtccatgagttcttgcaccttggctggatc 17734

                                                                         
Query: 334   gttagcacgcgttcgcattagcggcctacggatatcttccagcgggatctccatcaccac 393
              || |||||||| ||||| || ||||| |  || |  ||||| || || |||||||||||
Sbjct: 17733 attggcacgcgtccgcatcagtggcctcctaatcttgtccagtggaatttccatcaccac 17674

                            
Query: 394   agggcctttcttctc 408
             |||||| ||||||||
Sbjct: 17673 agggcccttcttctc 17659



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                         
Query: 149   agtgtttctttggtccctcggcggactttgcagcggatggttgggagtcctaggcgctgg 208
             ||||||||||| ||||| || ||||||||||||||||| || ||||| ||||||||||||
Sbjct: 18811 agtgtttctttcgtcccgcgacggactttgcagcggatagtcgggagacctaggcgctgg 18752

                                       
Query: 209   tgagcctcgtatcgatggcatccaga 234
             |||||||| || || || ||||||||
Sbjct: 18751 tgagcctcatagcggtgacatccaga 18726

>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete sequence
          Length = 128810

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                           
Query: 175    tttgcagcggatggttgggagtcctaggcgctggtgagcctcgta 219
              ||||||||| ||||| |||||||| || |||||||||||||||||
Sbjct: 105289 tttgcagcgtatggtggggagtccaagtcgctggtgagcctcgta 105333

>emb|CR956404.10| Pig DNA sequence from clone PigE-75D22 on chromosome 17, complete
             sequence
          Length = 135396

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 460   gacagcgaggccgcactgcccgctcttgctcct 492
             ||||||||||||||| || ||||||||| ||||
Sbjct: 71384 gacagcgaggccgcaatgaccgctcttgttcct 71416

>gb|AE012116.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 24 of
            460 of the complete genome
          Length = 13074

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  gacagcgaggccgcactgccc 480
            |||||||||||||||||||||
Sbjct: 2331 gacagcgaggccgcactgccc 2311

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 460    gacagcgaggccgcactgccc 480
              |||||||||||||||||||||
Sbjct: 256592 gacagcgaggccgcactgccc 256572

>emb|CT009685.18| Pig DNA sequence from clone CH242-172A22 on chromosome 17, complete
              sequence
          Length = 130271

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 460    gacagcgaggccgcactgcccgctcttgctcct 492
              ||||||||||||||| || ||||||||| ||||
Sbjct: 103388 gacagcgaggccgcaatgaccgctcttgttcct 103356

>ref|NM_195001.1| Oryza sativa (japonica cultivar-group) putative cytochrome P-450
           (OSJNBa0089D15.20), mRNA
          Length = 1260

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 304 gtccatgagctcctgcaccttctc 327
           ||||| ||||||||||||||||||
Sbjct: 462 gtccacgagctcctgcaccttctc 439

>gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, complete sequence
          Length = 241627

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   caccacagggcctttcttct 407
             ||||||||||||||||||||
Sbjct: 70627 caccacagggcctttcttct 70608

>emb|AL031255.1|HS694E4 Human DNA sequence from clone RP4-694E4 on chromosome 22q12.1-12.3
             Contains the 5' end of the PISD gene for
             Phosphatidylserine decarboxylase, the 3' end of a novel
             gene (MGC50372) and two CpG islands, complete sequence
          Length = 69901

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    cttcctggctgaagcaatcc 98
             ||||||||||||||||||||
Sbjct: 51671 cttcctggctgaagcaatcc 51690

>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5'
              end of the gene for a novel protein (9330163N21Rik), a
              ribosomal protein S2 (Rps2) pseudogene, the gene for a
              novel protein (E130018012Rik), the gene for a novel protein
              (6820428D13Rik), the Mrpl27 gene for mitochondrial
              ribosomal protein L27, the Xylt2 gene for
              xylosyltransferase II, a novel gene (5330426M11Rik), the
              gene for a novel protein (C230057C09Rik), the gene for a
              novel protein similar to Cdc34 and two pseudogenes similar
              to hypothetical protein Tr:Q8C517, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    tctccatcaccacagggcct 400
              ||||||||||||||||||||
Sbjct: 191127 tctccatcaccacagggcct 191108

>gb|AC163750.4| Pan troglodytes BAC clone CH251-295N9 from chromosome unknown, complete
             sequence
          Length = 182445

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    cttcctggctgaagcaatcc 98
             ||||||||||||||||||||
Sbjct: 95942 cttcctggctgaagcaatcc 95923

>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0089D15, from Chromosome 10, complete sequence
          Length = 164679

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gtccatgagctcctgcaccttctc 327
             ||||| ||||||||||||||||||
Sbjct: 93384 gtccacgagctcctgcaccttctc 93361

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 304     gtccatgagctcctgcaccttctc 327
               ||||| ||||||||||||||||||
Sbjct: 4096555 gtccacgagctcctgcaccttctc 4096532

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 444     tggaagacgaggccgagaca 463
               ||||||||||||||||||||
Sbjct: 1089076 tggaagacgaggccgagaca 1089095

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 304     gtccatgagctcctgcaccttctc 327
               ||||| ||||||||||||||||||
Sbjct: 4097376 gtccacgagctcctgcaccttctc 4097353


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,202,491
Number of Sequences: 3902068
Number of extensions: 3202491
Number of successful extensions: 54771
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54587
Number of HSP's gapped (non-prelim): 179
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)