| Clone Name | rbasd19m01 |
|---|---|
| Clone Library Name | barley_pub |
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 68.2 bits (165), Expect = 2e-11 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%) Frame = -3 Query: 465 IDQAWRLWEDGKATELVDSSVVPSCLLH-------EVLRCIHVGLLCVQDHPNDRPLMSS 307 + W W++G+A E+VD +V S EVL+CI +GLLCVQ+ RP MSS Sbjct: 742 LSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSS 801 Query: 306 VVFMIENESAMLPTPKQPIY 247 VV+M +E+ +P PK P Y Sbjct: 802 VVWMFGSEATEIPQPKPPGY 821
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 38.5 bits (88), Expect = 0.013 Identities = 23/61 (37%), Positives = 32/61 (52%) Frame = -3 Query: 465 IDQAWRLWEDGKATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMIEN 286 +D L ++ K LVD + + EV + I V LLC Q P +RP MS VV M+E Sbjct: 506 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 565 Query: 285 E 283 + Sbjct: 566 D 566
>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)| Length = 999 Score = 37.7 bits (86), Expect = 0.022 Identities = 16/38 (42%), Positives = 23/38 (60%) Frame = -3 Query: 381 EVLRCIHVGLLCVQDHPNDRPLMSSVVFMIENESAMLP 268 E+ + IH+GLLC P +RP M VV M++ S +P Sbjct: 935 EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVP 972
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 33.9 bits (76), Expect = 0.32 Identities = 15/45 (33%), Positives = 26/45 (57%) Frame = -3 Query: 435 GKATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVV 301 GKA +++D +V L + LR + + +LC+ + P RP M V+ Sbjct: 1142 GKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVL 1186
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = -3 Query: 390 LLHEVLRCIHVGLLCVQDHPNDRPLMSSVV 301 ++ E+LR + + L CV D P+ RP M VV Sbjct: 1094 IVKEMLRYLEIALRCVDDFPSKRPNMLQVV 1123
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 29.3 bits (64), Expect = 7.9 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Frame = -3 Query: 471 HFIDQAWRLWEDGKATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMI 292 + ++ A L + G ++D + P L + + V CV+ DRP M V + Sbjct: 719 NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTAL 778 Query: 291 ENESAML---PTPKQPI 250 E+ A+L P +QPI Sbjct: 779 EHALALLMGSPCIEQPI 795
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 29.3 bits (64), Expect = 7.9 Identities = 22/88 (25%), Positives = 37/88 (42%) Frame = -3 Query: 432 KATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMIENESAMLPTPKQP 253 K E+VD + + R + V L C++ + RP M +V E E A++ Sbjct: 821 KVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV--RELEDALIIENNAS 878 Query: 252 IYLAVGNTEGAEARVSMENSMNAMSITT 169 Y+ ++ G R S+ A+ TT Sbjct: 879 EYMKSIDSLGGSNRYSIVMDKRALPSTT 906
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not| make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 29.3 bits (64), Expect = 7.9 Identities = 22/88 (25%), Positives = 37/88 (42%) Frame = -3 Query: 432 KATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMIENESAMLPTPKQP 253 K E+VD + + R + V L C++ + RP M +V E E A++ Sbjct: 822 KVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV--RELEDALIIENNAS 879 Query: 252 IYLAVGNTEGAEARVSMENSMNAMSITT 169 Y+ ++ G R S+ A+ TT Sbjct: 880 EYMKSIDSLGGSNRYSIVMDKRALPSTT 907
>ASM3_CAEEL (Q9UAY4) Putative sphingomyelin phosphodiesterase asm-3 precursor| (EC 3.1.4.12) Length = 589 Score = 29.3 bits (64), Expect = 7.9 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%) Frame = -3 Query: 300 FMIENESAMLPT--PKQPIYLAVGNTEG 223 FM++N S + + PK P+Y AVGN EG Sbjct: 233 FMVKNLSDTIRSYFPKTPVYFAVGNHEG 260
>NU5M_PONPY (P03918) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH| dehydrogenase subunit 5) Length = 603 Score = 29.3 bits (64), Expect = 7.9 Identities = 16/59 (27%), Positives = 32/59 (54%) Frame = +2 Query: 161 PLRVVILIAFMEFSMLTLASAPSVLPTAKYIGCFGVGSIALSFSIINTTDDISGLSLGW 337 P+ + + + MEFS+ +AS P++ KY+ F ++ I+ T +++ L +GW Sbjct: 91 PVALFVTWSIMEFSLWYMASDPNINQFFKYLLIF-----LITMIILITANNLLQLFIGW 144
>Y180_TREPA (O83210) Hypothetical protein TP0180| Length = 52 Score = 29.3 bits (64), Expect = 7.9 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 Query: 178 THCVHGIFHAHPCFCTF 228 T C+H + H HPCFC + Sbjct: 11 TACLHCLPHLHPCFCPY 27 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,101,102 Number of Sequences: 219361 Number of extensions: 1525215 Number of successful extensions: 3119 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3054 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3117 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)