ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19m01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase rec... 68 2e-11
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 39 0.013
3RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC... 38 0.022
4EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 34 0.32
5BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 30 3.5
6CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 pr... 29 7.9
7NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.1... 29 7.9
8NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7... 29 7.9
9ASM3_CAEEL (Q9UAY4) Putative sphingomyelin phosphodiesterase asm... 29 7.9
10NU5M_PONPY (P03918) NADH-ubiquinone oxidoreductase chain 5 (EC 1... 29 7.9
11Y180_TREPA (O83210) Hypothetical protein TP0180 29 7.9

>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor|
           precursor (EC 2.7.11.1) (S-receptor kinase) (SRK)
          Length = 849

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
 Frame = -3

Query: 465 IDQAWRLWEDGKATELVDSSVVPSCLLH-------EVLRCIHVGLLCVQDHPNDRPLMSS 307
           +   W  W++G+A E+VD  +V S           EVL+CI +GLLCVQ+    RP MSS
Sbjct: 742 LSYVWSRWKEGRALEIVDPVIVDSLSSQPSIFQPQEVLKCIQIGLLCVQELAEHRPAMSS 801

Query: 306 VVFMIENESAMLPTPKQPIY 247
           VV+M  +E+  +P PK P Y
Sbjct: 802 VVWMFGSEATEIPQPKPPGY 821



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = -3

Query: 465 IDQAWRLWEDGKATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMIEN 286
           +D    L ++ K   LVD  +  +    EV + I V LLC Q  P +RP MS VV M+E 
Sbjct: 506 LDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 565

Query: 285 E 283
           +
Sbjct: 566 D 566



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>RLK5_ARATH (P47735) Receptor-like protein kinase 5 precursor (EC 2.7.11.1)|
          Length = 999

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = -3

Query: 381  EVLRCIHVGLLCVQDHPNDRPLMSSVVFMIENESAMLP 268
            E+ + IH+GLLC    P +RP M  VV M++  S  +P
Sbjct: 935  EISKVIHIGLLCTSPLPLNRPSMRKVVIMLQEVSGAVP 972



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
            (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
            MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -3

Query: 435  GKATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVV 301
            GKA +++D  +V   L +  LR + + +LC+ + P  RP M  V+
Sbjct: 1142 GKAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVL 1186



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>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
            2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
            (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 390  LLHEVLRCIHVGLLCVQDHPNDRPLMSSVV 301
            ++ E+LR + + L CV D P+ RP M  VV
Sbjct: 1094 IVKEMLRYLEIALRCVDDFPSKRPNMLQVV 1123



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>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC|
           2.7.11.1)
          Length = 901

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -3

Query: 471 HFIDQAWRLWEDGKATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMI 292
           + ++ A  L + G    ++D  + P   L  + +   V   CV+    DRP M  V   +
Sbjct: 719 NIVEWAVPLIKAGDIFAILDPVLSPPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTAL 778

Query: 291 ENESAML---PTPKQPI 250
           E+  A+L   P  +QPI
Sbjct: 779 EHALALLMGSPCIEQPI 795



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>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)|
          Length = 924

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/88 (25%), Positives = 37/88 (42%)
 Frame = -3

Query: 432  KATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMIENESAMLPTPKQP 253
            K  E+VD  +        + R + V L C++ +   RP M  +V   E E A++      
Sbjct: 821  KVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV--RELEDALIIENNAS 878

Query: 252  IYLAVGNTEGAEARVSMENSMNAMSITT 169
             Y+   ++ G   R S+     A+  TT
Sbjct: 879  EYMKSIDSLGGSNRYSIVMDKRALPSTT 906



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>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not|
            make infections protein 2) (Symbiosis receptor-like
            kinase) (MtSYMRK)
          Length = 925

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/88 (25%), Positives = 37/88 (42%)
 Frame = -3

Query: 432  KATELVDSSVVPSCLLHEVLRCIHVGLLCVQDHPNDRPLMSSVVFMIENESAMLPTPKQP 253
            K  E+VD  +        + R + V L C++ +   RP M  +V   E E A++      
Sbjct: 822  KVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIV--RELEDALIIENNAS 879

Query: 252  IYLAVGNTEGAEARVSMENSMNAMSITT 169
             Y+   ++ G   R S+     A+  TT
Sbjct: 880  EYMKSIDSLGGSNRYSIVMDKRALPSTT 907



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>ASM3_CAEEL (Q9UAY4) Putative sphingomyelin phosphodiesterase asm-3 precursor|
           (EC 3.1.4.12)
          Length = 589

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = -3

Query: 300 FMIENESAMLPT--PKQPIYLAVGNTEG 223
           FM++N S  + +  PK P+Y AVGN EG
Sbjct: 233 FMVKNLSDTIRSYFPKTPVYFAVGNHEG 260



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>NU5M_PONPY (P03918) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 603

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/59 (27%), Positives = 32/59 (54%)
 Frame = +2

Query: 161 PLRVVILIAFMEFSMLTLASAPSVLPTAKYIGCFGVGSIALSFSIINTTDDISGLSLGW 337
           P+ + +  + MEFS+  +AS P++    KY+  F      ++  I+ T +++  L +GW
Sbjct: 91  PVALFVTWSIMEFSLWYMASDPNINQFFKYLLIF-----LITMIILITANNLLQLFIGW 144



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>Y180_TREPA (O83210) Hypothetical protein TP0180|
          Length = 52

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 178 THCVHGIFHAHPCFCTF 228
           T C+H + H HPCFC +
Sbjct: 11  TACLHCLPHLHPCFCPY 27


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,101,102
Number of Sequences: 219361
Number of extensions: 1525215
Number of successful extensions: 3119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3117
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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