| Clone Name | rbasd19k13 |
|---|---|
| Clone Library Name | barley_pub |
>GDIR_ARATH (Q9SFC6) Rho GDP-dissociation inhibitor 1 (Rho GDI-1) (AtRhoGDI1)| Length = 240 Score = 102 bits (254), Expect = 2e-22 Identities = 46/69 (66%), Positives = 57/69 (82%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+V+ K MLGTFSPQ EPY + E++TPSG+FARGSYSAR KF+DDD K YL++ YSF Sbjct: 172 VKVDRAKEMLGTFSPQLEPYNHVMPEETTPSGMFARGSYSARTKFLDDDNKCYLEINYSF 231 Query: 189 EIRKDWPAL 163 +IRK+WPAL Sbjct: 232 DIRKEWPAL 240
>GDIR_CAEEL (Q20496) Probable rho GDP-dissociation inhibitor (Rho GDI)| Length = 191 Score = 58.9 bits (141), Expect = 3e-09 Identities = 25/65 (38%), Positives = 39/65 (60%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 + VE +K M+G+++P+ E YK+ + PSG+ RG Y K DDD VYLD +++ Sbjct: 127 ITVENEKYMMGSYAPKLEIQEYKSPNEEAPSGMMHRGKYKVYSKITDDDNNVYLDWQWTL 186 Query: 189 EIRKD 175 I K+ Sbjct: 187 HITKE 191
>GDIR_HUMAN (P52565) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) Length = 204 Score = 57.8 bits (138), Expect = 6e-09 Identities = 23/66 (34%), Positives = 39/66 (59%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+++ M+G++ P+ E Y + + P G+ ARGSYS + +F DDD +L ++ Sbjct: 137 VKIDKTDYMVGSYGPRAEEYEFLTPVEEAPKGMLARGSYSIKSRFTDDDKTDHLSWEWNL 196 Query: 189 EIRKDW 172 I+KDW Sbjct: 197 TIKKDW 202
>GDIR_MOUSE (Q99PT1) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) (GDI-1) Length = 204 Score = 55.1 bits (131), Expect = 4e-08 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+++ M+G++ P+ E Y + + P G+ ARGSY+ + +F DDD +L ++ Sbjct: 137 VKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDKTDHLSWEWNL 196 Query: 189 EIRKDW 172 I+K+W Sbjct: 197 TIKKEW 202
>GDIR_BOVIN (P19803) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) Length = 204 Score = 55.1 bits (131), Expect = 4e-08 Identities = 21/66 (31%), Positives = 39/66 (59%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+++ M+G++ P+ E Y + + P G+ ARGSY+ + +F DDD +L ++ Sbjct: 137 VKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLARGSYNIKSRFTDDDRTDHLSWEWNL 196 Query: 189 EIRKDW 172 I+K+W Sbjct: 197 TIKKEW 202
>GDIS_MOUSE (Q61599) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI| beta) (D4) Length = 200 Score = 53.1 bits (126), Expect = 2e-07 Identities = 22/66 (33%), Positives = 38/66 (57%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 +RV+ M+G++ P+ E Y + + P G+ ARG+Y + F DDD + +L ++ Sbjct: 133 MRVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDKQDHLTWEWNL 192 Query: 189 EIRKDW 172 I+KDW Sbjct: 193 AIKKDW 198
>GDIS_HUMAN (P52566) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI| beta) (Ly-GDI) Length = 201 Score = 52.4 bits (124), Expect = 3e-07 Identities = 21/66 (31%), Positives = 38/66 (57%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+V+ M+G++ P+ E Y + + P G+ ARG+Y + F DDD + +L ++ Sbjct: 134 VKVDKATFMVGSYGPRPEEYEFLTPVEEAPKGMLARGTYHNKSFFTDDDKQDHLSWEWNL 193 Query: 189 EIRKDW 172 I+K+W Sbjct: 194 SIKKEW 199
>GDIS_BOVIN (Q9TU03) Rho GDP-dissociation inhibitor 2 (Rho GDI 2) (Rho-GDI| beta) (Ly-GDI) (D4-GDP-dissociation inhibitor) (D4-GDI) Length = 200 Score = 52.4 bits (124), Expect = 3e-07 Identities = 22/66 (33%), Positives = 37/66 (56%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+V+ M+G++ P+ E Y + + P G+ ARG+Y + F DDD +L ++ Sbjct: 133 VKVDKATFMVGSYGPRPEEYEFLTPIEEAPKGMLARGTYHNKSFFTDDDKHDHLTWEWNL 192 Query: 189 EIRKDW 172 I+KDW Sbjct: 193 SIKKDW 198
>GDIT_MOUSE (Q62160) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI| gamma) (Rho-GDI2) Length = 225 Score = 46.2 bits (108), Expect = 2e-05 Identities = 20/66 (30%), Positives = 33/66 (50%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 +RV+ M+G++ P+ + Y + + P G ARG Y R F DDD +L + Sbjct: 158 LRVDKAIFMVGSYGPRAQEYEFVTSVEEAPRGALARGLYVVRSLFTDDDRLNHLSWEWHL 217 Query: 189 EIRKDW 172 + +DW Sbjct: 218 HVCQDW 223
>GDIR_YEAST (Q12434) Rho GDP-dissociation inhibitor (Rho GDI)| Length = 202 Score = 44.7 bits (104), Expect = 6e-05 Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%) Frame = -2 Query: 342 LGTFSPQQEP---YTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSFEIRK 178 LG+++P + Y + E PSG ARG+YSA KF+DDD +L + + EI K Sbjct: 144 LGSYAPNTKTKPFYEVELPESEAPSGFLARGNYSAVSKFIDDDKTNHLTLNWGVEIVK 201
>GDIT_HUMAN (Q99819) Rho GDP-dissociation inhibitor 3 (Rho GDI 3) (Rho-GDI| gamma) Length = 225 Score = 41.2 bits (95), Expect = 6e-04 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 +RV+ M+G++ P + Y + + P G RG Y F DDD +L + Sbjct: 158 LRVDKTVYMVGSYGPSAQEYEFVTPVEEAPRGALVRGPYLVVSLFTDDDRTHHLSWEWGL 217 Query: 189 EIRKDW 172 I +DW Sbjct: 218 CICQDW 223
>GDIR_CAVPO (P80237) Rho GDP-dissociation inhibitor 1 (Rho GDI 1) (Rho-GDI| alpha) (Fragments) Length = 111 Score = 33.1 bits (74), Expect = 0.17 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = -2 Query: 369 VRVEXQKVMLGTFSPQQEPYTYKAEEDSTPSGIFARGSYSARLKFVDDDGKVYLDMRYSF 190 V+++ M+G++ P+ E Y + + P G+ AR F DDD +L + Sbjct: 56 VKIDKTDYMVGSYGPRAEEYEFLTPMEEAPKGMLAR--------FTDDDKTDHLSGERNL 107 Query: 189 EIRK 178 I+K Sbjct: 108 TIKK 111
>NORM_CHRVO (Q7NXN3) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 465 Score = 29.3 bits (64), Expect = 2.4 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%) Frame = +1 Query: 220 PIIIHKL*SSRIGAPRKDAARGAIF---FGLVRVGLLLRAECPQHHLLXL 360 PI+ H L S A +DAA+G F G + GL+L E P H L L Sbjct: 79 PILSHHLGSRDRRAFSRDAAQGLWFGLMLGALGAGLMLLLEAPLRHWLHL 128
>LIPE_AERHY (P40600) Extracellular lipase precursor (EC 3.1.1.3)| (Triacylglycerol lipase) Length = 684 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/29 (51%), Positives = 15/29 (51%) Frame = +1 Query: 262 PRKDAARGAIFFGLVRVGLLLRAECPQHH 348 P DA RGAI R LR CPQHH Sbjct: 425 PAADAGRGAI-----RADACLRQGCPQHH 448
>VANB_PSEUH (O05617) Vanillate O-demethylase oxidoreductase (EC 1.14.13.-)| (Vanillate degradation ferredoxin-like protein) Length = 317 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +1 Query: 127 VSQESLLLLLIRQGRPVLPDLKAVPHVQVHLP 222 V+Q+ + L +R +LP ++A HV VHLP Sbjct: 12 VAQDIISLEFVRADGGLLPPVEAGAHVDVHLP 43
>BNI1_YEAST (P41832) Protein BNI1 (Synthetic lethal 39)| Length = 1953 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/31 (35%), Positives = 19/31 (61%) Frame = -2 Query: 294 EDSTPSGIFARGSYSARLKFVDDDGKVYLDM 202 + + S + ++GS + KF DGK+YL+M Sbjct: 145 QSHSASSLLSQGSLTNLSKFTTPDGKIYLEM 175
>GLT11_DROME (Q8IA41) Putative polypeptide N-acetylgalactosaminyltransferase 11| (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 11) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 11) (pp-GaNTase 11) Length = 557 Score = 27.3 bits (59), Expect = 9.3 Identities = 21/75 (28%), Positives = 35/75 (46%) Frame = +1 Query: 7 TIIINIT*QKSYQHPQTQPKLNIHLIFQTNPC*VLLLTDQVSQESLLLLLIRQGRPVLPD 186 T+ ++I +HP T + +I QT+P LL + ++L+ G P D Sbjct: 109 TVTVSIVIAIQQEHPHTLLRGIYSVITQTSP---YLLKE--------IVLVHDGHP---D 154 Query: 187 LKAVPHVQVHLPIII 231 L + H+ LPI+I Sbjct: 155 LDLIRHIHHKLPIVI 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,622,495 Number of Sequences: 219361 Number of extensions: 880534 Number of successful extensions: 1856 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1834 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1856 length of database: 80,573,946 effective HSP length: 98 effective length of database: 59,076,568 effective search space used: 1417837632 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)