Clone Information

BLAST Search Result

Clone Name	rbasd19j20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloropla...	338	1e-92
2	THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast pr...	329	6e-90
3	THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloropla...	327	2e-89
4	THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast pr...	326	4e-89
5	THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast pr...	321	1e-87
6	THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial ...	212	1e-54
7	THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial ...	212	1e-54
8	THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial ...	210	4e-54
9	THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial ...	203	5e-52
10	THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial ...	202	1e-51
11	THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial ...	163	4e-40
12	THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme	119	9e-27
13	THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme	119	1e-26
14	THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme	118	2e-26
15	THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme	115	1e-25
16	THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme	108	2e-23
17	THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme	91	3e-18
18	THI4_METTH (O27657) Putative thiazole biosynthetic enzyme	90	8e-18
19	THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme	90	8e-18
20	THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme	87	5e-17
21	THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme	86	8e-17
22	THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme	82	1e-15
23	THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme	77	5e-14
24	THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme	76	1e-13
25	THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)	54	6e-07
26	MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac...	40	0.007
27	GIDA_PHOPR (Q6LLF7) tRNA uridine 5-carboxymethylaminomethyl modi...	35	0.17
28	RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2...	35	0.22
29	GIDA_VIBPA (Q87K98) tRNA uridine 5-carboxymethylaminomethyl modi...	35	0.22
30	RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2...	35	0.29
31	RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2...	35	0.29
32	PKD2_SCHPO (Q09917) TRP-like ion channel pkd2 precursor (Polycys...	34	0.38
33	GIDA_RALSO (Q8XU65) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.38
34	GIDA_SALTY (Q8ZKW6) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.50
35	GIDA_SALPA (Q5PJX1) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.50
36	GIDA_SALCH (Q57HW9) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.50
37	GIDA_ECOLI (P0A6U3) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.50
38	GIDA_ECOL6 (P0A6U4) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.50
39	GIDA_ECO57 (Q8XAY0) tRNA uridine 5-carboxymethylaminomethyl modi...	34	0.50
40	GIDA_ERWCT (Q6CYI6) tRNA uridine 5-carboxymethylaminomethyl modi...	33	0.85
41	GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modi...	33	1.1
42	GIDA_SALTI (Q8Z2Q7) tRNA uridine 5-carboxymethylaminomethyl modi...	33	1.1
43	GIDA_VIBVY (Q7MGG9) tRNA uridine 5-carboxymethylaminomethyl modi...	33	1.1
44	GIDA_VIBVU (Q8DDH9) tRNA uridine 5-carboxymethylaminomethyl modi...	33	1.1
45	GIDA_SHIFL (Q83PJ6) tRNA uridine 5-carboxymethylaminomethyl modi...	32	1.4
46	GIDA_COXBU (P94613) tRNA uridine 5-carboxymethylaminomethyl modi...	32	1.9
47	RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, b...	32	1.9
48	VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor	32	2.5
49	PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM ...	32	2.5
50	GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)	32	2.5
51	GIDA_YERPS (Q663P9) tRNA uridine 5-carboxymethylaminomethyl modi...	31	3.2
52	GIDA_YERPE (Q8Z9R8) tRNA uridine 5-carboxymethylaminomethyl modi...	31	3.2
53	GIDA_METCA (Q60CS5) tRNA uridine 5-carboxymethylaminomethyl modi...	31	3.2
54	GIDA_IDILO (Q5QZI8) tRNA uridine 5-carboxymethylaminomethyl modi...	31	3.2
55	ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precu...	31	4.2
56	GIDA_SHEON (Q8E8A9) tRNA uridine 5-carboxymethylaminomethyl modi...	31	4.2
57	GIDA_VIBCH (Q9KNG4) tRNA uridine 5-carboxymethylaminomethyl modi...	31	4.2
58	NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58	30	5.5
59	NRG1_HUMAN (Q02297) Pro-neuregulin-1, membrane-bound isoform pre...	30	5.5
60	MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)	30	5.5
61	GIDA_PSEAE (Q9HT09) tRNA uridine 5-carboxymethylaminomethyl modi...	30	5.5
62	ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarat...	30	5.5
63	PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain...	30	7.2
64	ZFY1_XENLA (Q01611) Zinc finger Y-chromosomal protein 1 (ZFY-1)	30	7.2
65	HRDB_STRGR (P77951) RNA polymerase principal sigma factor hrdB	30	7.2
66	GIDA_PSESM (Q87TS3) tRNA uridine 5-carboxymethylaminomethyl modi...	30	7.2
67	GIDA_PSEF5 (Q4K399) tRNA uridine 5-carboxymethylaminomethyl modi...	30	7.2
68	RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2...	30	7.2
69	RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2...	30	7.2
70	YWS4_CAEEL (Q10940) Hypothetical protein B0310.4	30	9.4
71	GRPE_COREF (Q8FM79) Protein grpE (HSP-70 cofactor)	30	9.4
72	PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-)	30	9.4

>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor|
          Length = 354

 Score =  338 bits (866), Expect = 1e-92
 Identities = 170/196 (86%), Positives = 181/196 (92%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSC 526
           VV+KHAALFTST+MSRLLARPNVKLFNAVAVEDLIV+  RV GVVTNWALVSMNHDTQSC
Sbjct: 160 VVVKHAALFTSTVMSRLLARPNVKLFNAVAVEDLIVRRGRVGGVVTNWALVSMNHDTQSC 219

Query: 525 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 346
           MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKALDMN AED IVRLTREV
Sbjct: 220 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREV 279

Query: 345 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLKNVTPALH 166
           VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +DGT+  V+PAL 
Sbjct: 280 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALR 339

Query: 165 PEMILAASNNADIVDA 118
            E ++ AS + ++VDA
Sbjct: 340 EEFVI-ASKDDEVVDA 354

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>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor|
          Length = 356

 Score =  329 bits (843), Expect = 6e-90
 Identities = 167/196 (85%), Positives = 180/196 (91%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSC 526
           VVIKHAALFTSTIMS+LLARPNVKLFNAVA EDLIVK  RV GVVTNWALVSMNHDTQSC
Sbjct: 164 VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC 223

Query: 525 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 346
           MDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI+ VPGMKALDMN+AEDAIVRLTREV
Sbjct: 224 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREV 283

Query: 345 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLKNVTPALH 166
           VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PN +DGT       +H
Sbjct: 284 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGT---YVGGVH 340

Query: 165 PEMILAASNNADIVDA 118
           PE+ILAA+++A+  DA
Sbjct: 341 PELILAAADSAETADA 356

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>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor|
          Length = 354

 Score =  327 bits (838), Expect = 2e-89
 Identities = 168/196 (85%), Positives = 180/196 (91%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSC 526
           VVIKHAALFTST+MS LLARPNVKLFNAVAVEDLIV+  RV GVVTNWALVSMNHDTQSC
Sbjct: 163 VVIKHAALFTSTVMSLLLARPNVKLFNAVAVEDLIVRGGRVGGVVTNWALVSMNHDTQSC 222

Query: 525 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 346
           MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKALDMNTAED IVRLTREV
Sbjct: 223 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREV 282

Query: 345 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLKNVTPALH 166
           VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +DGT+   +P L 
Sbjct: 283 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTM---SPPLR 339

Query: 165 PEMILAASNNADIVDA 118
            E+++A  ++ ++VDA
Sbjct: 340 EELMIAYKDD-EVVDA 354

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>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)|
          Length = 352

 Score =  326 bits (836), Expect = 4e-89
 Identities = 166/196 (84%), Positives = 177/196 (90%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSC 526
           VVIKHAALFTSTIMS+LLARPNVKLFNAVA EDLIVK  RV GVVTNWALVSMNHDTQSC
Sbjct: 160 VVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHDTQSC 219

Query: 525 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 346
           MDPNVMEAKVVVSSCGHDGPFGATGVK L+ IGMI  VPGMKALDMN AEDAIVRLTRE+
Sbjct: 220 MDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREI 279

Query: 345 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLKNVTPALH 166
           VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG PN +DG   +    +H
Sbjct: 280 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDG---SYVGGIH 336

Query: 165 PEMILAASNNADIVDA 118
           PE+ILAA+++A+I DA
Sbjct: 337 PELILAAADSAEIADA 352

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>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)|
          Length = 349

 Score =  321 bits (823), Expect = 1e-87
 Identities = 165/196 (84%), Positives = 176/196 (89%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSC 526
           VV+KHAALFTSTIMS+LLARPNVKLFNAVA EDLIVK NRV GVVTNWALV+ NH TQSC
Sbjct: 157 VVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSC 216

Query: 525 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 346
           MDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI  VPGMKALDMNTAEDAIVRLTREV
Sbjct: 217 MDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREV 276

Query: 345 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLKNVTPALH 166
           VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA  LALKALG PN IDGTL      L 
Sbjct: 277 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL---VGNLS 333

Query: 165 PEMILAASNNADIVDA 118
           PE++LAA+++A+ VDA
Sbjct: 334 PELVLAAADSAETVDA 349

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>THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial precursor|
           (Stress-inducible protein sti35)
          Length = 320

 Score =  212 bits (539), Expect = 1e-54
 Identities = 106/164 (64%), Positives = 130/164 (79%), Gaps = 4/164 (2%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKEN----RVAGVVTNWALVSMNHD 538
           VV+KHAALFTSTIMS++L  PN+KLFNA  VEDLI + +    R+AGVVTNW LVSM+HD
Sbjct: 146 VVVKHAALFTSTIMSKVLQMPNIKLFNATCVEDLITRPSEEGVRIAGVVTNWTLVSMHHD 205

Query: 537 TQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRL 358
            QSCMDPN + A +++S+ GHDGP GA  VKRL  +  I+ + GM+ LDMN AEDAIV+ 
Sbjct: 206 DQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKG 265

Query: 357 TREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 226
           TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA  ALK
Sbjct: 266 TREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309

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>THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial precursor|
           (Stress-inducible protein sti35)
          Length = 324

 Score =  212 bits (539), Expect = 1e-54
 Identities = 106/166 (63%), Positives = 131/166 (78%), Gaps = 4/166 (2%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKEN----RVAGVVTNWALVSMNHD 538
           VV+KHAALFTSTIMS++L  PN KLFNA  VEDLI + +    R++GVVTNW LVSM+HD
Sbjct: 150 VVVKHAALFTSTIMSKVLQLPNCKLFNATCVEDLITRPSKEGVRISGVVTNWTLVSMHHD 209

Query: 537 TQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRL 358
            QSCMDPN + A +V+S+ GHD P GA  VKRL  +G I+ + GM+ LDMN AEDAIV+ 
Sbjct: 210 DQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKG 269

Query: 357 TREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
           TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA  ALK +
Sbjct: 270 TREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315

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>THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 328

 Score =  210 bits (534), Expect = 4e-54
 Identities = 110/164 (67%), Positives = 125/164 (76%), Gaps = 5/164 (3%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKEN-----RVAGVVTNWALVSMNH 541
           VV+KHAALFTST+M+R LA PNVKLFNA AVEDLIVKE      R+AGVVTNW LVS+NH
Sbjct: 151 VVVKHAALFTSTVMARTLALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTNWTLVSLNH 210

Query: 540 DTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVR 361
             QSCMDPN + A +VVS+ GHDGPFGA  VKRL    ++  +  M+ LDMN AED IV+
Sbjct: 211 GLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVK 270

Query: 360 LTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 229
            TREV PGMIV GME++E DGA RMGPTFG MM SG KAA  AL
Sbjct: 271 GTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314

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>THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 327

 Score =  203 bits (516), Expect = 5e-52
 Identities = 102/165 (61%), Positives = 130/165 (78%), Gaps = 5/165 (3%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVK--EN---RVAGVVTNWALVSMNH 541
           VV+KHA+LFTST+MS++L+ PNVKLFNA AVEDLI +  EN   ++AGVV NW LV+++H
Sbjct: 152 VVVKHASLFTSTLMSKVLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVNWTLVTLHH 211

Query: 540 DTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVR 361
           D  SCMDPN + A V++S+ GHDGPFGA   KRL  +G +  + GM+ LDMN+AEDAIV+
Sbjct: 212 DDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVK 271

Query: 360 LTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 226
            TREV  G+I+ GME++EIDG  RMGPTFGAM++SG KAA  ALK
Sbjct: 272 NTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316

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>THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 338

 Score =  202 bits (513), Expect = 1e-51
 Identities = 99/171 (57%), Positives = 129/171 (75%), Gaps = 7/171 (4%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKE-------NRVAGVVTNWALVSM 547
           VV+KHAALFTST++S++LA PNVK+FNA A EDLI+K         R+AG VTNW LVS+
Sbjct: 155 VVVKHAALFTSTVLSKVLAMPNVKMFNATACEDLIIKPCPINPGVQRIAGCVTNWTLVSL 214

Query: 546 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 367
           NHD QSCMDP+ + A +V S  GHDGPFGA  VKR+   G+ + +  M+ LDM  AED I
Sbjct: 215 NHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHI 274

Query: 366 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 214
              TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L R
Sbjct: 275 ANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDR 325

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>THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 326

 Score =  163 bits (413), Expect = 4e-40
 Identities = 95/183 (51%), Positives = 113/183 (61%), Gaps = 23/183 (12%)
 Frame = -1

Query: 705 VVIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVK------ENRVAGVVTNWALVSMN 544
           VV+KHAALF ST++S++L  PNVKLFNA  VEDL+ +      E  VAGVVTNW LV+  
Sbjct: 140 VVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQA 199

Query: 543 HDTQSCMDPNVMEAK---------------VVVSSCGHDGPFGATGVKRLQDIGMIQAVP 409
           H TQ CMDPNV+E                 V++S+ GHDGPFGA   KR+ DI   Q + 
Sbjct: 200 HGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLG 259

Query: 408 GMKALDMNTAEDAIVRLTREV--VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHL 235
           GMK LDMN AE  +V  +     V  M   GMEVAE+DG  RMGPTFGAM +SG  AA  
Sbjct: 260 GMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQ 319

Query: 234 ALK 226
            LK
Sbjct: 320 ILK 322

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>THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme|
          Length = 255

 Score =  119 bits (298), Expect = 9e-27
 Identities = 67/156 (42%), Positives = 92/156 (58%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVM 508
           A+  +T ++  + +  VK+FN + VEDL++K+NRV+G+V NW  V M       +DP  +
Sbjct: 105 AIEVATTIASKVVKSGVKIFNMIEVEDLVIKDNRVSGIVINWTPVLM---AGLHVDPLTI 161

Query: 507 EAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIV 328
           EAK V+ S GH        VKR    G+++ +PG  A+     E   V+ TREV PG+ V
Sbjct: 162 EAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAMWAEQGEKLTVKNTREVFPGLYV 217

Query: 327 TGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
           TGM    I GAPRMGP FG M +SG+KAA   LK L
Sbjct: 218 TGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 253

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>THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme|
          Length = 252

 Score =  119 bits (297), Expect = 1e-26
 Identities = 68/157 (43%), Positives = 93/157 (59%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVM 508
           A+  +T ++    +  VK+FN V VEDL+VK++RV+G+V NW  V M   T   +DP  +
Sbjct: 102 AIEVATTIASKTVKAGVKIFNMVEVEDLVVKDDRVSGIVINWTPVKM---TGLHVDPLTV 158

Query: 507 EAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIV 328
           EAK V+ S GH    GA   + L   G+I+ +PG  A+     E   V  T+EV PG+ V
Sbjct: 159 EAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAMWAEMGEKLTVENTKEVFPGLYV 214

Query: 327 TGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 217
           TGM    + GAPRMGP FG M +SG+KAA   L+ LG
Sbjct: 215 TGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251

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>THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme|
          Length = 252

 Score =  118 bits (296), Expect = 2e-26
 Identities = 69/156 (44%), Positives = 92/156 (58%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVM 508
           A+  +T ++    +  VK+FN + VEDL+VK+NRV+G+V NW  V M   T   +DP  +
Sbjct: 102 AIEVATTIASKTVKAGVKIFNMIEVEDLVVKDNRVSGIVINWTPVLM---TGLHVDPLTV 158

Query: 507 EAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIV 328
           EAK V+ S GH    GA   + L   G+I+ +PG  A+     E   V  TREV PG+ V
Sbjct: 159 EAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAMWAEQGERLTVENTREVFPGLYV 214

Query: 327 TGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
           TGM    I GAPRMGP FG M +SG+KAA   L+ L
Sbjct: 215 TGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250

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>THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme|
          Length = 251

 Score =  115 bits (289), Expect = 1e-25
 Identities = 68/154 (44%), Positives = 92/154 (59%)
 Frame = -1

Query: 675 STIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVMEAKV 496
           ST+ S+ + +   K+FN V VEDL+VK+ RV+G+V NW  V M   T   +DP  +EAK 
Sbjct: 106 STLASKAV-KAGAKIFNMVEVEDLVVKDGRVSGLVINWTPVMM---TGLHVDPLTVEAKF 161

Query: 495 VVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIVTGME 316
           VV S GH        +KR    G+I+A+PG   +     E+  V  TREV PG+  TGM 
Sbjct: 162 VVDSTGHGAQISQHLLKR----GLIKAIPGEGPMWAEKGEELTVEHTREVFPGLYATGMA 217

Query: 315 VAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 214
              + GAPRMGP FG M++SG+KAA   L+ LG+
Sbjct: 218 ANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251

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>THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme|
          Length = 274

 Score =  108 bits (270), Expect = 2e-23
 Identities = 62/154 (40%), Positives = 96/154 (62%), Gaps = 3/154 (1%)
 Frame = -1

Query: 669 IMSRLLARP---NVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVMEAK 499
           + ++L AR      ++ N   ++D+IV+ +RVAGVV NW+ V       +C+DP  + A+
Sbjct: 113 LAAKLAARALEAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAE 172

Query: 498 VVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIVTGM 319
            VV + GHD    A   ++L + GM++A   +  + +  +ED +V  T EV PG++V G+
Sbjct: 173 YVVDATGHD----AVVTRKLAERGMVEASK-LGPMWVERSEDLVVEKTGEVYPGLVVAGI 227

Query: 318 EVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 217
            VAE+ G PRMGPTFGAM++SG+KAA L  + LG
Sbjct: 228 AVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 261

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>THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme|
          Length = 260

 Score = 90.9 bits (224), Expect = 3e-18
 Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 2/141 (1%)
 Frame = -1

Query: 636 KLFNAVAVEDLIVKEN-RVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 460
           ++FN V+ ED++++EN RV G+V NW  V+     +  +DP ++  K+V+   GHD    
Sbjct: 120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHDAVVC 176

Query: 459 ATGVKRLQDIGMIQ-AVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMG 283
            T ++++ +  + +  + G K +     E   V  T+E+ PG+IV GM       APRMG
Sbjct: 177 NTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQEIYPGLIVAGMAANAATRAPRMG 236

Query: 282 PTFGAMMISGQKAAHLALKAL 220
           P FG M++SG+KAA LAL  L
Sbjct: 237 PVFGGMLLSGEKAAKLALDRL 257

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>THI4_METTH (O27657) Putative thiazole biosynthetic enzyme|
          Length = 266

 Score = 89.7 bits (221), Expect = 8e-18
 Identities = 51/158 (32%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
 Frame = -1

Query: 678 TSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVMEAK 499
           TST+ SR   +  +K+FN +++ED+++++  + G+V NW+ V M       +DP  + A+
Sbjct: 115 TSTLCSRA-CQAGLKIFNLMSIEDVMIRDEGITGLVLNWSSVEM---AGLHVDPLTVRAR 170

Query: 498 VVVSSCGHDGPFGATGVKRL-----QDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGM 334
            V+ + GHD        +++        G IQ   G +++  +  E A++  TREV P +
Sbjct: 171 AVIDATGHDCEIVKVVERKIGPELNTPDGRIQ---GERSMWADVGEAALIENTREVYPNL 227

Query: 333 IVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
            V GM    + GAPRMGP FG M++SG++ A + ++ L
Sbjct: 228 YVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 265

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>THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme|
          Length = 260

 Score = 89.7 bits (221), Expect = 8e-18
 Identities = 53/142 (37%), Positives = 83/142 (58%), Gaps = 3/142 (2%)
 Frame = -1

Query: 636 KLFNAVAVEDLIVKEN-RVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFG 460
           ++FN V+ ED++++EN RV G+V NW  V+     +  +DP ++  K+V+   GH+    
Sbjct: 120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTKLVIDGTGHEAVVC 176

Query: 459 ATGVKRLQD--IGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRM 286
            T ++++ +  IG +  + G K +     E   V  T+E+ PG+IV GM       APRM
Sbjct: 177 NTILRKIPNAKIGELGLL-GEKPMWSEVGERLAVNATQEIYPGLIVAGMAANAATRAPRM 235

Query: 285 GPTFGAMMISGQKAAHLALKAL 220
           GP FG M++SG+KAA LAL  L
Sbjct: 236 GPVFGGMLLSGEKAAKLALDRL 257

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>THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme|
          Length = 262

 Score = 87.0 bits (214), Expect = 5e-17
 Identities = 52/139 (37%), Positives = 77/139 (55%)
 Frame = -1

Query: 636 KLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGA 457
           K+   + VEDLI+KE++V+GVV     +         +DP  + AK V+ S GHD     
Sbjct: 126 KILTGIVVEDLILKEDKVSGVVIQSYSIEK---AGLHIDPITISAKYVIDSTGHDASVIN 182

Query: 456 TGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPT 277
           T  ++ +D+G+   VPG K++  +  E+++ R TREV PG+ V GM         RMG  
Sbjct: 183 TLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREVFPGLYVCGMAANAYHAGYRMGAI 240

Query: 276 FGAMMISGQKAAHLALKAL 220
           FG M +SG+K A L L+ L
Sbjct: 241 FGGMYLSGKKCAELILEKL 259

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>THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme|
          Length = 250

 Score = 86.3 bits (212), Expect = 8e-17
 Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
 Frame = -1

Query: 702 VIKHAALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWA-LVSMNHDTQSC 526
           ++  +  F S ++ R   +    +FN V+VED+ V+  RV GVV NW   V +       
Sbjct: 98  IVVDSVHFASGLLYRA-TKAGAIVFNNVSVEDVAVQNGRVCGVVVNWGPTVRLGLH---- 152

Query: 525 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 346
           +DP  ++A  VV   GH     A  V  L   G+++       +D + AE  +V  T E+
Sbjct: 153 VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEI 207

Query: 345 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
            PG++V+GM V  + G PRMGP FG M++SGQK A +  + L
Sbjct: 208 FPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249

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>THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme|
          Length = 310

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 52/163 (31%), Positives = 84/163 (51%), Gaps = 24/163 (14%)
 Frame = -1

Query: 636 KLFNAVAVEDLIVKENR-VAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHD---- 472
           ++ N     D++V+++  VAG V NW  V       +C+DP  +EA VVV + GHD    
Sbjct: 128 RIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDPIALEADVVVDATGHDAVVV 187

Query: 471 ------GPFGATGVKRLQD--IGMIQA-----------VPGMKALDMNTAEDAIVRLTRE 349
                 G   A G++ +++   GM Q+            PG  ++ +  +ED +V  T +
Sbjct: 188 SKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGK 247

Query: 348 VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
           V  G++  G+  A + G  RMGPTFGAM++SG+ AA+  +  L
Sbjct: 248 VHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290

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>THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme|
          Length = 263

 Score = 77.0 bits (188), Expect = 5e-14
 Identities = 50/139 (35%), Positives = 73/139 (52%)
 Frame = -1

Query: 636 KLFNAVAVEDLIVKENRVAGVVTNWALVSMNHDTQSCMDPNVMEAKVVVSSCGHDGPFGA 457
           K+   + VEDLI++E+ VAGVV N   +         +DP  + +KVVV + GH+     
Sbjct: 127 KILTGIVVEDLILREDGVAGVVINSYAIER---AGLHIDPLTIRSKVVVDATGHEASIVN 183

Query: 456 TGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPT 277
             VK+ +   +   VPG K++     E+A++R TREV P + V GM      G  RMG  
Sbjct: 184 ILVKKNK---LEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYRMGAI 240

Query: 276 FGAMMISGQKAAHLALKAL 220
           FG M +SG+  A L  + L
Sbjct: 241 FGGMYLSGKLCAELITEKL 259

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>THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme|
          Length = 260

 Score = 75.9 bits (185), Expect = 1e-13
 Identities = 48/158 (30%), Positives = 84/158 (53%), Gaps = 5/158 (3%)
 Frame = -1

Query: 678 TSTIMSRLLARP---NVKLFNAVAVEDLIVKENR--VAGVVTNWALVSMNHDTQSCMDPN 514
           ++  M++L A+      K+ + V+VED+I +++   V GV   W+ V ++      +DP 
Sbjct: 107 SAEFMAKLAAKAIDAGAKIIHGVSVEDVIFRDDPLGVRGVCIQWSAVEISG---LHVDPL 163

Query: 513 VMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREVVPGM 334
            + ++ VV + GHD    +   ++   I +  +V G ++     AE  IV  T ++V G+
Sbjct: 164 FLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKIVKGL 220

Query: 333 IVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 220
              GM VA +   PRMGP FG M++SG+K A +  + L
Sbjct: 221 YAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258

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>THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)|
          Length = 48

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -1

Query: 381 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPR 289
           AED IV+  RE+VPGMIVTGMEVAEIDGAPR
Sbjct: 18  AEDLIVKGGREIVPGMIVTGMEVAEIDGAPR 48

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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 40.0 bits (92), Expect = 0.007
 Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
 Frame = +2

Query: 284  PILGAPSISATSMPVTIMPGTTSRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAP 463
            P+    +I  +S P T    T    + T             PGT WI+    +  T  A 
Sbjct: 4286 PVATMSTIHPSSTPETTHTSTVLTTKATTRATSSTSTPSSTPGTTWILTELTTAATTTAG 4345

Query: 464  KGP-SWPQELTTTLASMTLGSMQDCVSWFMETSAQLVTTPATRFSLTMRSSTAT 622
             GP + P     T   +T  +     +    ++A L +TP T + LT  S+TAT
Sbjct: 4346 TGPTATPSSTPGTTWILTELTTTATTTASTGSTATLSSTPGTTWILTEPSTTAT 4399



 Score = 30.4 bits (67), Expect = 5.5
 Identities = 31/131 (23%), Positives = 42/131 (32%), Gaps = 14/131 (10%)
 Frame = +2

Query: 338  PGTT------SRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAPKGPSWPQELTTT 499
            PGTT      +    T             PGT WI+    +  T   P G +     T  
Sbjct: 4356 PGTTWILTELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATVTVPTGSTATASSTQA 4415

Query: 500  LASMTLGSMQDCVSWFMETSAQLVTTPATRFSLTMRSSTA--------TALKSLTLGRAR 655
             A     S          + A   ++P T  +L    STA        TA+ S +LG   
Sbjct: 4416 TAGTPHVSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTTW 4475

Query: 656  RRLMMVEVKSA 688
             RL      +A
Sbjct: 4476 TRLSQTTTPTA 4486



 Score = 30.0 bits (66), Expect = 7.2
 Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 1/114 (0%)
 Frame = +2

Query: 284  PILGAPSISATSMPVTIMPGTTSRVRRTXXXXXXXXXX-XXIPGTAWIMPMSWSRLTPVA 460
            P+    +I  +S P T    T    + T              PGT WI+    +  T  A
Sbjct: 3059 PMATMSTIHPSSTPETTHTSTVLTTKATTTRATSSMSTPSSTPGTTWILTELTTAATTTA 3118

Query: 461  PKGPSWPQELTTTLASMTLGSMQDCVSWFMETSAQLVTTPATRFSLTMRSSTAT 622
                  P     T   +T  S    V+    ++A   +T AT  +L + +STAT
Sbjct: 3119 ALPHGTPSSTPGTTWILTEPSTTATVTVPTGSTATASSTRATAGTLKVLTSTAT 3172

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>GIDA_PHOPR (Q6LLF7) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           AL+ + +   L  +PN+ LF   AV+DLIV+ +RV GVVT   L
Sbjct: 102 ALYKAAVREVLENQPNLMLFQQ-AVDDLIVENDRVIGVVTEMGL 144

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>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1228

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 378  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 202
            E  ++R+  EV PG I+ GM   +  G   + P +  +  I G+KA  +   +L  PNG 
Sbjct: 878  ESGVIRVGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGF 935

Query: 201  DGTLKNV 181
            +GT+ ++
Sbjct: 936  EGTVIDI 942

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>GIDA_VIBPA (Q87K98) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 631

 Score = 35.0 bits (79), Expect = 0.22
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           AL+ + + + L   PN+ LF   +V+DLIV+++RV GVVT   L
Sbjct: 102 ALYKAYVRNALENAPNLTLFQQ-SVDDLIVEQDRVVGVVTQMGL 144

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>RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1226

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 378  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 202
            E  ++R+  EV PG I+ GM   +  G   + P +  +  I G+KA  +   +L  PNG 
Sbjct: 876  ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933

Query: 201  DGTLKNV 181
            +GT+ ++
Sbjct: 934  EGTVIDI 940

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>RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1226

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 378  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 202
            E  ++R+  EV PG I+ GM   +  G   + P +  +  I G+KA  +   +L  PNG 
Sbjct: 876  ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933

Query: 201  DGTLKNV 181
            +GT+ ++
Sbjct: 934  EGTVIDI 940

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>PKD2_SCHPO (Q09917) TRP-like ion channel pkd2 precursor (Polycystic kidney|
           disease-related ion channel 2)
          Length = 710

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 16/63 (25%), Positives = 34/63 (53%)
 Frame = +2

Query: 473 SWPQELTTTLASMTLGSMQDCVSWFMETSAQLVTTPATRFSLTMRSSTATALKSLTLGRA 652
           SW +    ++  + +G MQD  +W+++++     TP+T   L + ++ A A + + LG  
Sbjct: 231 SWGRNFMWSMGIIRIGFMQDVFTWYVKSTG---GTPSTLVDLGIHANVALAKRGIDLGSL 287

Query: 653 RRR 661
            +R
Sbjct: 288 AKR 290

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>GIDA_RALSO (Q8XU65) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 647

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVT 568
           L+ + I  RL  +PN+ LF   AVEDL+V+ +RV G VT
Sbjct: 103 LYKAAIRHRLENQPNLMLFQQ-AVEDLLVEGDRVVGAVT 140

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>GIDA_SALTY (Q8ZKW6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_SALPA (Q5PJX1) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_SALCH (Q57HW9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_ECOLI (P0A6U3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_ECOL6 (P0A6U4) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_ECO57 (Q8XAY0) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.9 bits (76), Expect = 0.50
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_ERWCT (Q6CYI6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   I + L  +PN+ +F   AV+DLIV+ +RV G VT   L
Sbjct: 103 LYRQAIRTALENQPNLTIFQQ-AVDDLIVENDRVVGAVTQMGL 144

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>GIDA_AZOSE (Q5P4J6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 652

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 20/43 (46%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+ + I  RL  +PN+ LF   AV+DL V  +RV GVVT   L
Sbjct: 103 LYKAAIRHRLENQPNLWLFQQ-AVDDLTVSGDRVTGVVTQIGL 144

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>GIDA_SALTI (Q8Z2Q7) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   +   L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 103 LYRQAVRIALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_VIBVY (Q7MGG9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 632

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           AL+ + +   L   PN+ LF   AV+DLIV++++V GV+T   L
Sbjct: 102 ALYKAYVRDFLENAPNLTLFQQ-AVDDLIVEQDQVRGVITQMGL 144

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>GIDA_VIBVU (Q8DDH9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 632

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 18/44 (40%), Positives = 28/44 (63%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           AL+ + +   L   PN+ LF   AV+DLIV++++V GV+T   L
Sbjct: 102 ALYKAYVRDFLENAPNLTLFQQ-AVDDLIVEQDQVRGVITQMGL 144

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>GIDA_SHIFL (Q83PJ6) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -1

Query: 681 FTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           +   + + L  +PN+ +F   AVEDLIV+ +RV G VT   L
Sbjct: 104 YRQAVRTALENQPNLMIFQQ-AVEDLIVENDRVVGAVTQMGL 144

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>GIDA_COXBU (P94613) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 627

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+ + I   L  +P++ LF    V+DLI++ NR AGVVT   L
Sbjct: 104 LYKAAIHHALENQPHLWLFQQ-GVDDLIIQNNRAAGVVTQMGL 145

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>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'|
            chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase
            beta chain (Transcriptase beta chain) (RNA polymerase
            beta subunit); DNA-directed RNA polymerase beta' chain
            (Transcri
          Length = 2894

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
 Frame = -1

Query: 414  VPGMKALDM-NTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM---ISGQK 247
            +PG K  +  +  E  IVR+   V  GMI+ G    ++     + PT    +   I G+K
Sbjct: 865  IPGTKEAETAHLDESGIVRIGTYVSAGMILVG----KVSPKGEVKPTPEERLLRAIFGEK 920

Query: 246  AAHLALKALGRPNGIDGTLKNV 181
            A H+  K+L  P  ++GT+ +V
Sbjct: 921  AGHVVNKSLYCPPSLEGTVVDV 942

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>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor|
          Length = 866

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 28/111 (25%), Positives = 41/111 (36%)
 Frame = +2

Query: 308 SATSMPVTIMPGTTSRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAPKGPSWPQE 487
           +ATS P T  P +T+    T            +P TA     + +  T  A    +    
Sbjct: 152 TATSTPTTTTPTSTTTTTAT----------TTVPTTASTTTDTTTAATTTAATTTAATTT 201

Query: 488 LTTTLASMTLGSMQDCVSWFMETSAQLVTTPATRFSLTMRSSTATALKSLT 640
             TT A+ T  +     +    T+    TT AT  + T  S+T  A  S T
Sbjct: 202 AATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTSSATTAATTSST 252

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>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
            membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
 Frame = +2

Query: 197  PSMPFGRPRALSARCAAFWPEIIMAP----KVGPILGAPSISATSMPVTIMPGTTSRVRR 364
            PS P   P A SA  +  +  I  AP    K GP    PS++AT+   + +P TTS    
Sbjct: 690  PSSP-AAPAASSA--SPMFKPIFTAPPKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAP 746

Query: 365  TXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAPKGPSWPQELTTTLASMTLGSMQDCVSW 544
            T             P  +  +P  + + T      P+    L T LAS T  ++    S 
Sbjct: 747  TFQPVFSSMG----PPASVPLPAPFFKQTTTPATAPTTTAPLFTGLASAT-SAVAPITS- 800

Query: 545  FMETSAQLVTTPATRFSLTMRSSTATALKSLTLGRARRRLMMVEVKSAACLMT 703
                S    + PA  F +   SS++ +  + T   A +  +    +++A   T
Sbjct: 801  -ASPSTDSASKPAFGFGINSVSSSSVSTTTSTATAASQPFLFGAPQASAASFT 852

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>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)|
          Length = 205

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +2

Query: 206 PFGRPRA---LSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTSRVRR 364
           P G P A   L AR A  WP + + P V   LGAP+  + ++P  + PG+  R RR
Sbjct: 76  PCGPPEAAAGLGARLA--WP-LRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRR 128

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>GIDA_YERPS (Q663P9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F    VEDLIV+ +RV G VT   L
Sbjct: 103 LYRLAVRTALENQPNLMIFQQ-PVEDLIVENDRVVGAVTQMGL 144

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>GIDA_YERPE (Q8Z9R8) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   + + L  +PN+ +F    VEDLIV+ +RV G VT   L
Sbjct: 103 LYRLAVRTALENQPNLMIFQQ-PVEDLIVENDRVVGAVTQMGL 144

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>GIDA_METCA (Q60CS5) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 625

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           +L+   +   L A+ N+ LF    V DLIV+  R AGVVT   L
Sbjct: 102 SLYRKAVREGLSAQENLSLFQQTVV-DLIVEGRRAAGVVTQMGL 144

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>GIDA_IDILO (Q5QZI8) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 631

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+   I   L  +PN+ +F     +DLIV+ +RV GVVT   L
Sbjct: 105 LYKQAIRYALETQPNLSIFQQ-GCDDLIVENDRVTGVVTQMGL 146

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>ALL3_AEDAE (O01949) 30 kDa salivary gland allergen Aed a 3 precursor|
          Length = 253

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 19/46 (41%), Positives = 22/46 (47%)
 Frame = +1

Query: 553 DERPVGDDSGDAVLLDDEVLHGDGVEELDVGAREEAAHDGGGEERG 690
           DE PV +  GD    DD    GDG EE + G       D GGE+ G
Sbjct: 25  DEEPVAE-GGDEETTDDA--GGDGGEEENEGEEHAGDEDAGGEDTG 67

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>GIDA_SHEON (Q8E8A9) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 16/44 (36%), Positives = 27/44 (61%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           AL+   I + L  + N+++F   AV+D++V+ + V GVVT   L
Sbjct: 102 ALYRQKIQNILQNQANLRIFQQ-AVDDIVVENDHVVGVVTQMGL 144

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>GIDA_VIBCH (Q9KNG4) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 631

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -1

Query: 687 ALFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           AL+ + + + L   PN+ LF   AV+D+IV+ + + GVVT   L
Sbjct: 102 ALYKAYVRNVLENTPNLTLFQQ-AVDDVIVEHDHIRGVVTQMGL 144

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>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58|
          Length = 546

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 38/156 (24%), Positives = 57/156 (36%), Gaps = 4/156 (2%)
 Frame = +2

Query: 164 GCSAGVTFLSVPSMP--FGRPRALSARCAAFWPEIIMAPKVGPILGAP-SISATSMP-VT 331
           G +A      +P+    FG P A  A  AA       AP   P  GAP + SA   P  T
Sbjct: 93  GTAAATPAFGIPAATSAFGAPAATPAFGAAAATPAFGAPAATPAFGAPAATSAFGAPAAT 152

Query: 332 IMPGTTSRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAPKGPSWPQELTTTLASM 511
              G  +  + +             P  ++  P + +  T  AP    +    TT  A+M
Sbjct: 153 TAFGAPASTQASAFGAPAPAVGTVAPTFSFATPATSAPTT--APPAFGFGTTATTAAAAM 210

Query: 512 TLGSMQDCVSWFMETSAQLVTTPATRFSLTMRSSTA 619
              S+   +  F     Q  T  +  F+ T  ++TA
Sbjct: 211 P-ASLSSGIGSFSFPKPQATTAASLNFNTTTTTATA 245

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>NRG1_HUMAN (Q02297) Pro-neuregulin-1, membrane-bound isoform precursor|
           (Pro-NRG1) [Contains: Neuregulin-1 (Neu differentiation
           factor) (Heregulin) (HRG) (Breast cancer cell
           differentiation factor p45) (Acetylcholine
           receptor-inducing activity) (ARIA) (Se
          Length = 639

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 449 TPVAPKGPSWPQELTTTLASMTLGSMQDCVSWFMETSAQ--LVTTPATR 589
           TP +PK P  P E++  ++SMT+      VS FME      LVT P  R
Sbjct: 440 TPSSPKSP--PSEMSPPVSSMTVSMPSMAVSPFMEEERPLLLVTPPRLR 486

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>MDN1_YEAST (Q12019) Midasin (MIDAS-containing protein)|
          Length = 4910

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 17/45 (37%), Positives = 24/45 (53%)
 Frame = +1

Query: 550  GDERPVGDDSGDAVLLDDEVLHGDGVEELDVGAREEAAHDGGGEE 684
            GDE P   + GD  + +DE    +  EE DVG +E+   D  GE+
Sbjct: 4202 GDEDPNAPEDGDEEIENDE----NAEEENDVGEQEDEVKDEEGED 4242

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>GIDA_PSEAE (Q9HT09) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 630

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+ + I   L  +PN+ +F   A +DLIV++++V GVVT   L
Sbjct: 103 LYKAAIRHTLENQPNLWIFQQ-ACDDLIVEQDQVRGVVTQMGL 144

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>ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate|
           aminotransferase (EC 2.6.1.-)
           (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate)
           aminotransferase) (UDP-Ara4O aminotransferase)
           (Polymyxin resistance protein pmrH)
          Length = 382

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -1

Query: 378 EDAIVRLTREVVPGMIVTGMEVAEIDG--APRMGPTFGAMMISGQKAAHLALKALG 217
           ++ I  +TR +  G I TG E  +++   A R+G      + S   A H+AL ALG
Sbjct: 15  DEEIAAVTRVLRSGWITTGPECQKLEEEFAARVGARHAVALSSATGAMHVALLALG 70

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>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Activated in prostate cancer protein)
          Length = 2839

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 271  AEGRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVLGRVHVKRLH 405
            ++G A   GT++ GD     N A   LAG AH  VL  +H  +LH
Sbjct: 2655 SQGAASQEGTMNRGDFLLSVNGA--SLAGLAHGNVLKVLHQAQLH 2697

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>ZFY1_XENLA (Q01611) Zinc finger Y-chromosomal protein 1 (ZFY-1)|
          Length = 794

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 20/63 (31%), Positives = 31/63 (49%)
 Frame = +1

Query: 496 DLGLHDVGVHAGLCVVVHGDERPVGDDSGDAVLLDDEVLHGDGVEELDVGAREEAAHDGG 675
           + G+H V  H     VV G+E  + DD+ +  ++ +EVL  D V E  + A     H+  
Sbjct: 142 ETGMHSVSGH-----VVIGEE--ITDDALEEDMISEEVLVADCVSEAVIDANGIPVHEND 194

Query: 676 GEE 684
            EE
Sbjct: 195 SEE 197

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>HRDB_STRGR (P77951) RNA polymerase principal sigma factor hrdB|
          Length = 514

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 598 DDEVLHGD-GVEELDVGAREEAAHDGGGEERG-VLDDD 705
           DDE+L GD   EE+  G  EE   +G GE +G VL DD
Sbjct: 163 DDEILDGDEAAEEVKAGKGEE--EEGEGENKGFVLSDD 198

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>GIDA_PSESM (Q87TS3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 630

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 17/43 (39%), Positives = 27/43 (62%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+ + I   L  +PN+ +F   A +DLIV++++V GVVT   L
Sbjct: 103 LYKAAIREILENQPNLWIFQQ-ACDDLIVEQDQVRGVVTQMGL 144

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>GIDA_PSEF5 (Q4K399) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 630

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -1

Query: 684 LFTSTIMSRLLARPNVKLFNAVAVEDLIVKENRVAGVVTNWAL 556
           L+ + +   L  +PN+ +F   A +DLIV++++V GVVT   L
Sbjct: 103 LYKAAVREILENQPNLWIFQQAA-DDLIVEQDQVRGVVTQMGL 144

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>RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1155

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 378  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 202
            E+ I+R+   V PG I+ G    + +G   + P F  +  I G+KA  +   +L  P+G 
Sbjct: 816  ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873

Query: 201  DGTLKNV 181
            +GT+ +V
Sbjct: 874  EGTVIDV 880

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>RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1155

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 378  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 202
            E+ I+R+   V PG I+ G    + +G   + P F  +  I G+KA  +   +L  P+G 
Sbjct: 816  ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873

Query: 201  DGTLKNV 181
            +GT+ +V
Sbjct: 874  EGTVIDV 880

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>YWS4_CAEEL (Q10940) Hypothetical protein B0310.4|
          Length = 112

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
 Frame = +1

Query: 256 GDHHGAE---GRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVL--GRVHVKRLHPG 411
           G+ H  E   G  H RG    G+ H G+ H  +   GE H G    G+ H    H G
Sbjct: 18  GETHRGETHRGETH-RGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRG 73

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>GRPE_COREF (Q8FM79) Protein grpE (HSP-70 cofactor)|
          Length = 237

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 21/51 (41%), Positives = 24/51 (47%)
 Frame = +1

Query: 553 DERPVGDDSGDAVLLDDEVLHGDGVEELDVGAREEAAHDGGGEERGVLDDD 705
           D   + D+ GD    DDE +H D VE L     EEA    GG E    DDD
Sbjct: 3   DSYKLPDNPGDPDATDDEGIHPDEVENL----IEEAERTQGGSE----DDD 45

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>PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-)|
          Length = 694

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = -1

Query: 180 TPALHPEMILAASNNADIVD 121
           TP LHPE I A    ADIVD
Sbjct: 3   TPRLHPETIAAVKERADIVD 22


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,054,019
Number of Sequences: 219361
Number of extensions: 1513521
Number of successful extensions: 5985
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 5645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5931
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result