ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd19j14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA 666 0.0
2gb|AF498268.1| Haynaldia villosa clone kong28 mRNA 644 0.0
3ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 3e-51
4ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group... 210 3e-51
5ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group... 210 3e-51
6ref|XM_468415.1| Oryza sativa (japonica cultivar-group), mRNA 210 3e-51
7gb|AY346465.1| Oryza sativa (indica cultivar-group) putative bro... 210 3e-51
8dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
9dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
10dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
11dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
12dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
13dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clon... 210 3e-51
14gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planth... 196 4e-47
15gb|AY112171.1| Zea mays CL11049_1 mRNA sequence 145 1e-31
16dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
17dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
18dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
19dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
20gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H... 44 0.37
21ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.7
22gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, comple... 40 5.7
23gb|AF131950.1| Human papillomavirus candHPV85, complete genome 40 5.7
24gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, com... 40 5.7
25gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of... 40 5.7
26dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.7
27dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.7

>gb|BC029142.1| Homo sapiens, clone IMAGE:5196881, mRNA
          Length = 1061

 Score =  666 bits (336), Expect = 0.0
 Identities = 407/424 (95%), Gaps = 5/424 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   cttcctggtcgtgcttctttacaaggnaaaagctctcctaaatgctcccaggcatatttt 63
           |||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 869 cttcctgg-cgtgcttctttacaagg-aaaagctctcctaaatgctcccaggcttatttt 812

                                                                       
Query: 64  t-gcgatacaggctacaaacacttttacat-ctataggatctgcctgctactcaaaagta 121
           | ||||||||| || ||||||||||||||  ||||||||||||||||||||||||| |||
Sbjct: 811 ttgcgatacagactgcaaacacttttacagactataggatctgcctgctactcaaa-gta 753

                                                                       
Query: 122 ccgcggacacacatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaa 181
           ||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||
Sbjct: 752 ccgcggacacacatatttacagatccacaagtaccgggcatggactcctgcatctctaaa 693

                                                                       
Query: 182 acttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattactt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 acttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattactt 633

                                                                       
Query: 242 gattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcgg 301
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 632 gattgtcctggtttactatcggtaatctgtggatcttcttcctgagcatcagagctgcgg 573

                                                                       
Query: 302 catcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaa 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 catcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaa 513

                                                                       
Query: 362 tcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacac 421
           |||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 512 tcttcgtctttggcccatgtgaagccctcacgtgatcgctcttgacgacgaccccgacac 453

               
Query: 422 atcg 425
           ||||
Sbjct: 452 atcg 449



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>gb|AF498268.1| Haynaldia villosa clone kong28 mRNA
          Length = 1474

 Score =  644 bits (325), Expect = 0.0
 Identities = 395/413 (95%), Gaps = 4/413 (0%)
 Strand = Plus / Plus

                                                                       
Query: 13  cgtgcttctttacaaggnaaaagctctcctaaatgctcccaggcatatttttgcgataca 72
           ||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||||
Sbjct: 49  cgtgcttctttacaagg-aaaagctctcctaaaagttcccaggcttatttttgcgataca 107

                                                                       
Query: 73  ggctacaaacacttttacat-ctataggatctgcctgctactcaaaagtaccgcggacac 131
           |||||||| ||||||||||  |||||| |||||||||||||||||||| |||||||||||
Sbjct: 108 ggctacaa-cacttttacagactatag-atctgcctgctactcaaaagcaccgcggacac 165

                                                                       
Query: 132 acatatttacagatccacaagtaccgggcatgggctcctgcgcctctaaaacttcagcat 191
           ||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||
Sbjct: 166 acatatttacagatccacaagtaccgggcatggactcctgcatctctaaaacttcagcat 225

                                                                       
Query: 192 ggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctattacttgattgtcctg 251
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 226 ggcctccaacgcgcgaagaacgtcgtcgcgggtaactatacctattacttgattgtcctg 285

                                                                       
Query: 252 gtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtcac 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gtttactatcggtaatctgtggatcttcttcttgagcatcagagctgcggcatcggtcac 345

                                                                       
Query: 312 tgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtcct 371
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 346 tgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtctt 405

                                                                
Query: 372 tgacccatgtgaagccctcgcgcgatcgctcttgacgacgaccccgacacatc 424
           || |||||||||||||||||||| ||||||||| |||||||||||||| ||||
Sbjct: 406 tggcccatgtgaagccctcgcgcaatcgctcttcacgacgaccccgacgcatc 458



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>ref|XM_507550.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 916

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>ref|XM_507549.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 1002

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>ref|XM_507051.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C12.20-2
           mRNA
          Length = 956

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 696 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 637

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 636 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 577

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 576 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 517

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 516 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 463



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>ref|XM_468415.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 833

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449



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>gb|AY346465.1| Oryza sativa (indica cultivar-group) putative brown planthopper
            susceptibility protein Hd002A mRNA, complete cds
          Length = 1265

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                        
Query: 176  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
            |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 1114 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 1055

                                                                        
Query: 236  ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
            | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 1054 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 995

                                                                        
Query: 296  ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
            |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 994  ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 935

                                                                  
Query: 356  ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
            |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 934  ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 881



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>dbj|AK104947.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G08, full
           insert sequence
          Length = 833

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449



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>dbj|AK104525.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-H03, full
           insert sequence
          Length = 994

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 682 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 623

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 622 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 563

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 562 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 503

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 502 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 449



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>dbj|AK104684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-B10, full
           insert sequence
          Length = 916

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>dbj|AK104103.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B08, full
           insert sequence
          Length = 1002

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 690 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 631

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 630 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 571

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 570 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 511

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 510 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 457



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>dbj|AK071580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106O04, full
           insert sequence
          Length = 1514

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 683 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 624

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 623 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 564

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 563 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 504

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 503 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 450



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>dbj|AK065134.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P24, full
           insert sequence
          Length = 955

 Score =  210 bits (106), Expect = 3e-51
 Identities = 202/234 (86%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 695 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 636

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagag 295
           | |||||  ||||||| ||||| || ||||||||||||||||||||||| ||||||||||
Sbjct: 635 tcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcatcagag 576

                                                                       
Query: 296 ctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacat 355
           |||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| |
Sbjct: 575 ctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcactt 516

                                                                 
Query: 356 ctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           |||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 515 ctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 462



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>gb|AY346466.1| Oryza sativa (indica cultivar-group) brown planthopper-induced
           resistance protein 1 (Bi1) mRNA, complete cds
          Length = 1098

 Score =  196 bits (99), Expect = 4e-47
 Identities = 202/235 (85%), Gaps = 1/235 (0%)
 Strand = Plus / Minus

                                                                       
Query: 176 tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactataccta 235
           |||||| || ||||| ||| |||||| |||||||||||||| | ||||||||||||||||
Sbjct: 949 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactataccta 890

                                                                       
Query: 236 ttacttgattgtcctggtttactatcggtaatctgtggatc-ttcttcttgagcatcaga 294
           | |||||  ||||||| ||||| || ||||||||||||||| |||||||| |||||||||
Sbjct: 889 tcacttgtctgtcctgatttacaattggtaatctgtggatccttcttctttagcatcaga 830

                                                                       
Query: 295 gctgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcaca 354
           ||||| |||||  | |||||||| ||  ||| ||| ||||| |||||||| |||||||| 
Sbjct: 829 gctgccgcatccattactgttttgtcagatggtagagtgatggctggagaggtcatcact 770

                                                                  
Query: 355 tctgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacga 409
           ||||||||||||||| |||||||||| |||||||| || || || ||||||||||
Sbjct: 769 tctgcaatcttcgtctttgacccatgagaagccctggcccggtcactcttgacga 715



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>gb|AY112171.1| Zea mays CL11049_1 mRNA sequence
          Length = 803

 Score =  145 bits (73), Expect = 1e-31
 Identities = 203/248 (81%)
 Strand = Plus / Minus

                                                                       
Query: 177 ctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacctat 236
           ||||| ||||| |||| | |||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 594 ctaaatcttcaacatgccttccaacacgcgaagaacatcagcgcgggtaactatacctat 535

                                                                       
Query: 237 tacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcatcagagc 296
           |||      |||||||||||| |  ||||||||||||||||||||||||||||| ||| |
Sbjct: 534 tacnnnnncgtcctggtttacaactggtaatctgtggatcttcttcttgagcatgagaac 475

                                                                       
Query: 297 tgcggcatcggtcactgttttatcgcatgatagcgtgattgctggagatgtcatcacatc 356
            || |||||  |||| ||||| ||  | ||||| ||||| ||||||||||||||||| ||
Sbjct: 474 agcagcatccatcacggttttgtcagacgatagtgtgatagctggagatgtcatcacttc 415

                                                                       
Query: 357 tgcaatcttcgtccttgacccatgtgaagccctcgcgcgatcgctcttgacgacgacccc 416
            |  ||||||||| | |||||||| || || || || || ||| |||||||||  |||||
Sbjct: 414 cgatatcttcgtcttggacccatgagaggctcttgcccggtcgttcttgacgatcacccc 355

                   
Query: 417 gacacatc 424
           ||| ||||
Sbjct: 354 gacgcatc 347



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                            
Query: 231      acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 290
                |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 35111790 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 35111731

                               
Query: 291      cagagctgcggcatc 305
                ||||||||| |||||
Sbjct: 35111730 cagagctgccgcatc 35111716



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 176      tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 234
                |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 35111977 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 35111919



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                            
Query: 310      actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 369
                |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 35111621 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 35111562

                      
Query: 370      cttgac 375
                 |||||
Sbjct: 35111561 tttgac 35111556



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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1202_E07
          Length = 145014

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                        
Query: 231  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 290
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 7146 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 7087

                           
Query: 291  cagagctgcggcatc 305
            ||||||||| |||||
Sbjct: 7086 cagagctgccgcatc 7072



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 176  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 234
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 7333 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 7275



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                        
Query: 310  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 369
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 6977 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 6918

                  
Query: 370  cttgac 375
             |||||
Sbjct: 6917 tttgac 6912



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>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 231   acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 290
             |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 84953 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 84894

                            
Query: 291   cagagctgcggcatc 305
             ||||||||| |||||
Sbjct: 84893 cagagctgccgcatc 84879



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 176   tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 234
             |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 85140 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 85082



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Minus

                                                                         
Query: 310   actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 369
             |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 84784 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 84725

                   
Query: 370   cttgac 375
              |||||
Sbjct: 84724 tttgac 84719



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>dbj|AK068163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135B04, full
            insert sequence
          Length = 4217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                        
Query: 231  acctattacttgattgtcctggtttactatcggtaatctgtggatcttcttcttgagcat 290
            |||||| |||||  ||||||| ||||| || ||||||||||||||||||||||| |||||
Sbjct: 2400 acctatcacttgtctgtcctgatttacaattggtaatctgtggatcttcttctttagcat 2459

                           
Query: 291  cagagctgcggcatc 305
            ||||||||| |||||
Sbjct: 2460 cagagctgccgcatc 2474



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 176  tctaaaacttcagcatggcctccaacgcgcgaagaacgtcatcgcgggtaactatacct 234
            |||||| || ||||| ||| |||||| |||||||||||||| | |||||||||||||||
Sbjct: 2213 tctaaacctccagcagggcttccaactcgcgaagaacgtcagcacgggtaactatacct 2271



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 310  actgttttatcgcatgatagcgtgattgctggagatgtcatcacatctgcaatcttcgtc 369
            |||||||| ||  ||| ||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 2569 actgttttgtcagatggtagagtgatggctggagaggtcatcacttctgcaatcttcgtc 2628

                  
Query: 370  cttgac 375
             |||||
Sbjct: 2629 tttgac 2634



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>gb|AC037492.5|AC037492 Homo sapiens chromosome 8, clone RP11-38H17, complete sequence
          Length = 168278

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 79     aaacacttttacatctatagga 100
              ||||||||||||||||||||||
Sbjct: 101167 aaacacttttacatctatagga 101188



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>ref|XM_841417.1| Trypanosoma brucei TREU927 hypothetical protein (Tb927.1.4760)
            partial mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  tctgtggatcttcttcttga 286
            ||||||||||||||||||||
Sbjct: 1378 tctgtggatcttcttcttga 1397



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>gb|AC018738.4| Homo sapiens BAC clone RP11-419H23 from 2, complete sequence
          Length = 178530

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    tcttcttgagcatcagagct 297
              ||||||||||||||||||||
Sbjct: 171536 tcttcttgagcatcagagct 171517



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>gb|AF131950.1| Human papillomavirus candHPV85, complete genome
          Length = 7812

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   tttgcgatacaggctacaaa 81
            ||||||||||||||||||||
Sbjct: 3734 tttgcgatacaggctacaaa 3753



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>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence
          Length = 143045

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gctctcctaaatgctcccag 54
             ||||||||||||||||||||
Sbjct: 76812 gctctcctaaatgctcccag 76793



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>gb|AE004451.1| Pseudomonas aeruginosa PAO1, section 12 of 529 of the complete genome
          Length = 10700

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 192  ggcctccaacgcgcgaagaacgtcatcg 219
            ||||| ||| ||||||||||||||||||
Sbjct: 2227 ggcctgcaaggcgcgaagaacgtcatcg 2200



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>dbj|AP002347.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2514A21, complete
              sequence
          Length = 130977

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    acatatttacagatccacaa 151
              ||||||||||||||||||||
Sbjct: 119986 acatatttacagatccacaa 119967



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>dbj|AP000790.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736I10, complete
             sequence
          Length = 176944

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   acatatttacagatccacaa 151
             ||||||||||||||||||||
Sbjct: 30122 acatatttacagatccacaa 30103


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,069,011
Number of Sequences: 3902068
Number of extensions: 3069011
Number of successful extensions: 53055
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53004
Number of HSP's gapped (non-prelim): 43
length of query: 425
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 403
effective length of database: 17,147,199,772
effective search space: 6910321508116
effective search space used: 6910321508116
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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