ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd19j05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2 | 30 | 2.2 | 2 | IF2_BRUME (Q8YEB3) Translation initiation factor IF-2 | 30 | 2.2 | 3 | IF2_BRUAB (Q57AA0) Translation initiation factor IF-2 | 30 | 2.2 | 4 | IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2 | 30 | 2.2 |
|---|
>IF2_BRUSU (Q8FXT2) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 2.2 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Frame = -2 Query: 179 RRRXAILLHAQLPAGXGSA----------HPAPVFLGXRQRGRLRATX*PRHEHLQE 39 R +++ AQL G GS HP + + + GR+RA R EH++E Sbjct: 631 RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVNDRGEHVKE 687
>IF2_BRUME (Q8YEB3) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 2.2 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Frame = -2 Query: 179 RRRXAILLHAQLPAGXGSA----------HPAPVFLGXRQRGRLRATX*PRHEHLQE 39 R +++ AQL G GS HP + + + GR+RA R EH++E Sbjct: 631 RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVNDRGEHVKE 687
>IF2_BRUAB (Q57AA0) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 2.2 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Frame = -2 Query: 179 RRRXAILLHAQLPAGXGSA----------HPAPVFLGXRQRGRLRATX*PRHEHLQE 39 R +++ AQL G GS HP + + + GR+RA R EH++E Sbjct: 631 RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVNDRGEHVKE 687
>IF2_BRUA2 (Q2YQR7) Translation initiation factor IF-2| Length = 959 Score = 29.6 bits (65), Expect = 2.2 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 10/57 (17%) Frame = -2 Query: 179 RRRXAILLHAQLPAGXGSA----------HPAPVFLGXRQRGRLRATX*PRHEHLQE 39 R +++ AQL G GS HP + + + GR+RA R EH++E Sbjct: 631 RTAEGVVIEAQLDRGRGSVATVLIQKGTLHPGDILVAGSEWGRVRALVNDRGEHVKE 687 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,732,129 Number of Sequences: 219361 Number of extensions: 222507 Number of successful extensions: 409 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 408 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 409 length of database: 80,573,946 effective HSP length: 58 effective length of database: 67,851,008 effective search space used: 1628424192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
