>NU155_HUMAN (O75694) Nuclear pore complex protein Nup155 (Nucleoporin Nup155)|
            (155 kDa nucleoporin)
          Length = 1391

 Score = 33.5 bits (75), Expect = 0.89
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +1

Query: 250  KHLTDTVGGRKTLNSSPNL--FSSRVVIFSKLLAGTPRKFPLNSI 378
            K L+D+V    TL+SS  +   S ++V+  K+ AGTPR FPL+ I
Sbjct: 1227 KELSDSV----TLSSSDRMHALSLKIVLLGKIYAGTPRFFPLDFI 1267

>NU155_RAT (P37199) Nuclear pore complex protein Nup155 (Nucleoporin Nup155)|
            (155 kDa nucleoporin) (P140)
          Length = 1390

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
 Frame = +1

Query: 250  KHLTDTVGGRKTLNSSPNL--FSSRVVIFSKLLAGTPRKFPLNSI 378
            K L+D+V    TL+SS  +   S ++V+  K+ AGTPR FPL+ I
Sbjct: 1226 KELSDSV----TLSSSDRMHALSLKLVLLGKIYAGTPRFFPLDFI 1266

>TIM50_CAEEL (Q22647) Import inner membrane translocase subunit TIM50,|
           mitochondrial precursor
          Length = 452

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = -1

Query: 851 DESXNAEQLKLRXPRXFXRLKRMSVQPLTAPRRRKVNPRKQTGLNSALASLEKFQGYANA 672
           +E+   E+L++  P+        S  P  AP    ++      LNS   SLEK +  A+ 
Sbjct: 81  EEAPKVEKLEVESPKIEAEKVLSSPPPAPAPTSSAIDE-----LNSLKDSLEKLESAASK 135

Query: 671 AADSAAQTKDESP--NAEPVSA 612
           ++ S+  + D S   NAE + A
Sbjct: 136 SSSSSGGSSDNSDPGNAEEIEA 157

>NU155_MOUSE (Q99P88) Nuclear pore complex protein Nup155 (Nucleoporin Nup155)|
            (155 kDa nucleoporin)
          Length = 1391

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +1

Query: 250  KHLTDTVGGRKTLNSSPNL--FSSRVVIFSKLLAGTPRKFPLNSI 378
            K L D+V     L+SS  +   S ++V+  K+ AGTPR FPL+ I
Sbjct: 1227 KELNDSVA----LSSSDRMHALSLKLVLLGKIYAGTPRFFPLDFI 1267

>GLMU_WOLPM (Q73IM4) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 430

 Score = 30.4 bits (67), Expect = 7.5
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = +3

Query: 3   AAALVLLKCCRNLHELISRIEQMNSYTRSYELDYIVLL*HKVNFH 137
           A A +++ C +NL EL+ +IE  NS T  Y L  IV +  K N +
Sbjct: 167 ANAGIMVACAKNLRELVEKIE-CNSSTHEYYLTDIVSIAVKSNLN 210

>PGCA_CANFA (Q28343) Aggrecan core protein precursor (Cartilage-specific|
            proteoglycan core protein) (CSPCP)
          Length = 2333

 Score = 30.0 bits (66), Expect = 9.8
 Identities = 25/88 (28%), Positives = 38/88 (43%)
 Frame = -1

Query: 680  ANAAADSAAQTKDESPNAEPVSASDTAQNIGRXXXXXXXXXAQEQVVEADVNVASGSPLP 501
            A++  +S+++T D    A  VSA+  A   G          A     EADV  ASG  + 
Sbjct: 1893 ASSVPESSSETSDFPERAVGVSAAPEAS--GGASGAPDVSEATSTFPEADVEGASGLGVS 1950

Query: 500  GMKQQLEEAVSIPKATVDILKDQVFSFD 417
            G      EA     AT ++ ++   S+D
Sbjct: 1951 GGTSAFPEAPREGSATPEVQEEPTTSYD 1978


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,232,354
Number of Sequences: 219361
Number of extensions: 2106766
Number of successful extensions: 5055
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5054
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 9726903375
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)