ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd18o14 |
|---|---|
| Clone Library Name | barley_pub |
>EXT1_DROME (Q9V730) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Protein| tout-velu) Length = 760 Score = 54.7 bits (130), Expect = 3e-07 Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +EA+ GCIPV++++ VLPF I W + ++ DE + ++ I Sbjct: 330 FCLVPRGRRLGSFRFLEALQAGCIPVLLSNAWVLPFESKIDWKQAAIWADERLLLQVPDI 389 Query: 478 LTSIPIDDI--LRKQ 440 + SIP + I LR+Q Sbjct: 390 VRSIPAERIFALRQQ 404
>EXT2_BOVIN (O77783) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (HS-polymerase) (HS-POL) (Multiple exostoses protein 2 homolog) Length = 718 Score = 53.5 bits (127), Expect = 6e-07 Identities = 30/74 (40%), Positives = 39/74 (52%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FC+ G L + + GC+PVIIAD VLPF++ + W V V EE + + SI Sbjct: 317 FCMVLRGARLGQAVLSDVLRAGCVPVIIADSYVLPFSEVLDWKRASVVVPEEKMSDVYSI 376 Query: 478 LTSIPIDDILRKQR 437 L SIP I QR Sbjct: 377 LQSIPRRQIEEMQR 390
>EXT1_CAEEL (O01704) Multiple exostoses homolog 1 (Related to mammalian RIB| protein 1) Length = 378 Score = 53.1 bits (126), Expect = 8e-07 Identities = 24/63 (38%), Positives = 36/63 (57%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +E + GC+PV+I+D +LPF++ I W+ + V E D + + Sbjct: 267 FCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALSIPEL 326 Query: 478 LTS 470 L S Sbjct: 327 LMS 329
>EXT2_HUMAN (Q93063) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT2) (Multiple exostoses protein Length = 718 Score = 52.8 bits (125), Expect = 1e-06 Identities = 28/74 (37%), Positives = 39/74 (52%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FC+ G L + + GC+PV+IAD +LPF++ + W V V EE + + SI Sbjct: 317 FCVVLRGARLGQAVLSDVLQAGCVPVVIADSYILPFSEVLDWKRASVVVPEEKMSDVYSI 376 Query: 478 LTSIPIDDILRKQR 437 L SIP I QR Sbjct: 377 LQSIPQRQIEEMQR 390
>EXT2_MOUSE (P70428) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 2 homolog) Length = 718 Score = 50.8 bits (120), Expect = 4e-06 Identities = 24/60 (40%), Positives = 36/60 (60%) Frame = -2 Query: 616 LVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSILTSIPIDDILRKQR 437 L + + GC+PV+IAD +LPF++ + W + V V EE + + SIL +IP I QR Sbjct: 331 LSDVLQAGCVPVVIADSYILPFSEVLDWKKASVVVPEEKMSDVYSILQNIPQRQIEEMQR 390
>EXT1_MOUSE (P97464) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 49.7 bits (117), Expect = 8e-06 Identities = 26/70 (37%), Positives = 41/70 (58%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +EA+ C+PV++++ LPF++ I W++ V DE + ++ S Sbjct: 333 FCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDERLLLQIPST 392 Query: 478 LTSIPIDDIL 449 + SI D IL Sbjct: 393 IRSIHQDKIL 402
>EXT1_HUMAN (Q16394) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXT1) (Multiple exostoses protein Length = 746 Score = 49.7 bits (117), Expect = 8e-06 Identities = 26/70 (37%), Positives = 41/70 (58%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +EA+ C+PV++++ LPF++ I W++ V DE + ++ S Sbjct: 333 FCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDERLLLQIPST 392 Query: 478 LTSIPIDDIL 449 + SI D IL Sbjct: 393 IRSIHQDKIL 402
>EXT1_CRIGR (Q9JK82) Exostosin-1 (EC 2.4.1.224) (EC 2.4.1.225) (Heparan sulfate| copolymerase) (Multiple exostoses protein 1 homolog) Length = 746 Score = 49.7 bits (117), Expect = 8e-06 Identities = 26/70 (37%), Positives = 41/70 (58%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +EA+ C+PV++++ LPF++ I W++ V DE + ++ S Sbjct: 333 FCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVINWNQAAVIGDERLLLQIPST 392 Query: 478 LTSIPIDDIL 449 + SI D IL Sbjct: 393 IRSIHQDKIL 402
>EXT1C_BRARE (Q5IGR6) Exostosin-1c (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1c) (Multiple exostoses protein 1 homolog c) Length = 737 Score = 48.5 bits (114), Expect = 2e-05 Identities = 25/70 (35%), Positives = 42/70 (60%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +E++ CIPV++++ LPF+D I W++ V DE + ++ S Sbjct: 325 FCLVPRGRRLGSFRFLESLQAACIPVLLSNGWELPFSDVIQWNQAVVEGDERLLLQVPST 384 Query: 478 LTSIPIDDIL 449 + ++ ID +L Sbjct: 385 VRAVGIDRVL 394
>EXT1B_BRARE (Q5IGR7) Exostosin-1b (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1b) (Multiple exostoses protein 1 homolog b) Length = 741 Score = 48.5 bits (114), Expect = 2e-05 Identities = 26/70 (37%), Positives = 40/70 (57%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +EA+ C+PV++++ LPF++ I W+ V DE + ++ S Sbjct: 328 FCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEVIDWNTAAVIGDERLLLQIPST 387 Query: 478 LTSIPIDDIL 449 + SI D IL Sbjct: 388 VRSIHQDKIL 397
>EXT1A_BRARE (Q5IGR8) Exostosin-1a (EC 2.4.1.224) (EC 2.4.1.225)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase 1a) (Multiple exostoses protein 1 homolog a) Length = 730 Score = 46.6 bits (109), Expect = 7e-05 Identities = 26/70 (37%), Positives = 39/70 (55%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P G S R +EA+ C+PV++++ LPF++ I W V DE + ++ S Sbjct: 317 FCLVPRGRRLGSFRFLEALQAACVPVMLSNGWELPFSEIIDWRTAAVIGDERLLLQIPST 376 Query: 478 LTSIPIDDIL 449 + SI D IL Sbjct: 377 VRSIHQDRIL 386
>EXTL3_HUMAN (O43909) Exostosin-like 3 (EC 2.4.1.223)| (Glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Putative tumor suppressor protein EXTL3) (Multiple exostosis-like protein 3) (Hereditary multiple exostoses gene isolog) (E Length = 919 Score = 44.7 bits (104), Expect = 3e-04 Identities = 19/61 (31%), Positives = 36/61 (59%) Frame = -2 Query: 619 RLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSILTSIPIDDILRKQ 440 RL EA+ G +PV++ + + LP+ D + W+E + V + V ++ +L S+ D+L + Sbjct: 450 RLFEALEVGAVPVVLGEQVQLPYQDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMR 509 Query: 439 R 437 R Sbjct: 510 R 510
>EXTL3_MOUSE (Q9WVL6) Exostosin-like 3 (EC 2.4.1.-) (Multiple exostosis-like| protein 3) Length = 918 Score = 44.3 bits (103), Expect = 4e-04 Identities = 19/61 (31%), Positives = 36/61 (59%) Frame = -2 Query: 619 RLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSILTSIPIDDILRKQ 440 RL EA+ G +PV++ + + LP+ D + W+E + V + V ++ +L S+ D+L + Sbjct: 449 RLFEALEVGAVPVVLGEQVQLPYHDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMR 508 Query: 439 R 437 R Sbjct: 509 R 509
>EXT2_DROME (Q9Y169) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225) (Protein sister| of tout-velu) Length = 717 Score = 43.9 bits (102), Expect = 5e-04 Identities = 26/74 (35%), Positives = 35/74 (47%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSI 479 FCL P LVE + CIPVI D+ VLPF D I W V + E ++ + Sbjct: 317 FCLLGRSLRMGQPDLVEIMSQHCIPVIAVDNYVLPFEDVIDWSLASVRIRENELHSVMQK 376 Query: 478 LTSIPIDDILRKQR 437 L +I I+ Q+ Sbjct: 377 LKAISSVKIVEMQK 390
>EXT2_CAEEL (O01705) Exostosin-2 (EC 2.4.1.223) (EC 2.4.1.224)| (Glucuronyl-galactosyl-proteoglycan/Glucuronosyl-N- acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Multiple exostoses homolog 2) Length = 814 Score = 39.3 bits (90), Expect = 0.011 Identities = 18/60 (30%), Positives = 33/60 (55%) Frame = -2 Query: 613 VEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSILTSIPIDDILRKQRL 434 + ++ GCIP+I+++ +LPF D I W + +P+ I+ S I DI+ +R+ Sbjct: 351 LSSLQLGCIPIILSNSQLLPFQDLIDWRRATYRLPLARLPEAHFIVQSFEISDIIEMRRV 410
>EXTL1_MOUSE (Q9JKV7) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 669 Score = 38.1 bits (87), Expect = 0.025 Identities = 18/51 (35%), Positives = 29/51 (56%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDE 506 FCL P G + ++A+ GCIPV+++ LPF++ I W + + DE Sbjct: 266 FCLIP-GHRSATSCFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIIADE 315
>EXT3_DROME (Q9XZ08) Exostosin-3 (EC 2.4.1.223) (Protein brother of tout-velu)| Length = 972 Score = 37.7 bits (86), Expect = 0.033 Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Frame = -2 Query: 619 RLVEAVVFGCIPVII-ADDIVLPFADAIPWDEIGVFVDEEDVPKLDSILTSIPIDDILRK 443 R+ EA+ G +PVI+ AD++ LP+A+ + W + + + + +L +L ++ D+L Sbjct: 500 RIYEALRSGAVPVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLLL 559 Query: 442 QR 437 +R Sbjct: 560 RR 561
>EXTL1_HUMAN (Q92935) Exostosin-like 1 (EC 2.4.1.224)| (Glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase) (Exostosin-L) (Multiple exostosis-like protein) Length = 676 Score = 37.4 bits (85), Expect = 0.043 Identities = 17/51 (33%), Positives = 28/51 (54%) Frame = -2 Query: 658 FCLCPLGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDE 506 FCL + R ++A+ GCIPV+++ LPF++ I W + + DE Sbjct: 272 FCLISGHRPEAASRFLQALQAGCIPVLLSPRWELPFSEVIDWTKAAIVADE 322
>ATR_ARATH (Q9FKS4) Serine/threonine-protein kinase ATR (EC 2.7.11.1)| (DNA-repair protein ATR) (AtATR) (Ataxia telangiectasia-mutated and Rad3-related homolog) (Rad3-like protein) (AtRAD3) Length = 2702 Score = 36.6 bits (83), Expect = 0.073 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%) Frame = -2 Query: 553 FADAIP--WDEIGVFVDEEDVPKLDSILTSIPIDDILRKQRLLANPSMKKAMLFPQPAQP 380 FA A+P DE+ FVD D P+ D L +P D I + ++L N P Sbjct: 1041 FAAALPALLDELVCFVDIADTPETDRRLQRLP-DAIKKISKVLTNAE-------DLPGFL 1092 Query: 379 RDAFHQILNGLARKLPHPETVYLQ 308 ++ F +LN + RK+ H + ++LQ Sbjct: 1093 QNHFVGLLNSIDRKMLHADDIFLQ 1116
>DYHC_FUSSO (P78716) Dynein heavy chain, cytosolic (DYHC)| Length = 4349 Score = 33.5 bits (75), Expect = 0.62 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Frame = -2 Query: 376 DAFHQI-LNGLARKLPHPETVYLQPGEKHLNWTSG--PVGDL 260 D FHQ+ L+G+ K P+P T YL ++ L W PV DL Sbjct: 3541 DWFHQLHLSGIQYKSPNPVTEYLSTADERLGWQENALPVDDL 3582
>FABH2_VIBVY (Q7M7I3) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 (EC| 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 2) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2) Length = 362 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +1 Query: 337 ACEQGHLESDGMHLLVALAAGTTWPSSLMGW 429 A EQGH+++ LL A AG TW + L+ W Sbjct: 294 AVEQGHIKAGDNILLAAFGAGLTWGAGLVKW 324
>FABH2_VIBVU (Q8D719) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 (EC| 2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III protein 2) (Beta-ketoacyl-ACP synthase III 2) (KAS III 2) Length = 362 Score = 33.1 bits (74), Expect = 0.81 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = +1 Query: 337 ACEQGHLESDGMHLLVALAAGTTWPSSLMGW 429 A EQGH+++ LL A AG TW + L+ W Sbjct: 294 AVEQGHIKAGDNILLAAFGAGLTWGAGLVKW 324
>HEM1_DESVH (Q72C23) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 440 Score = 33.1 bits (74), Expect = 0.81 Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 6/85 (7%) Frame = -2 Query: 508 EEDVPKLDSILTSIPID----DILRKQRLLANPSMKKAM--LFPQPAQPRDAFHQILNGL 347 EE+ K L S+ + D++R+ +A + + + L P + RDA +L+ + Sbjct: 326 EEETGKFGQWLRSLELQPTIVDLIRRSERIAQDELARTLKRLGPVDDETRDALEAMLSSM 385 Query: 346 ARKLPHPETVYLQPGEKHLNWTSGP 272 RKL H +L+ +H +GP Sbjct: 386 VRKLNHEPITFLK--RRHSEEDAGP 408
>DHX9_CAEEL (Q22307) Probable ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear| DNA helicase II) (NDH II) Length = 1301 Score = 32.0 bits (71), Expect = 1.8 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%) Frame = -2 Query: 502 DVPKLDSILTSIPIDDILRKQRLLANP--------SMKKAMLFPQPAQPRDAFHQILNGL 347 ++ L +L +PI+ ++ K +L + AM FP P PR+ H L+G Sbjct: 856 ELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMCDVASAMSFPTPFVPREKHHSRLSGT 915 Query: 346 ARK 338 RK Sbjct: 916 QRK 918
>COG1_HUMAN (Q8WTW3) Conserved oligomeric Golgi complex component 1| Length = 980 Score = 30.8 bits (68), Expect = 4.0 Identities = 20/75 (26%), Positives = 34/75 (45%) Frame = -2 Query: 643 LGWAPWSPRLVEAVVFGCIPVIIADDIVLPFADAIPWDEIGVFVDEEDVPKLDSILTSIP 464 +G+ WS +V+ ++ G ++ DD A A WDE+ + +E+ S+ + I Sbjct: 680 MGYQVWSSAVVKVLIHGFTQSLLLDDAGSVLATATSWDELEI---QEEAESGSSVTSKI- 735 Query: 463 IDDILRKQRLLANPS 419 RL A PS Sbjct: 736 --------RLPAQPS 742
>SERA_THASE (Q9S1H0) Selenate reductase alpha subunit precursor (EC 1.97.1.9)| (Selenate reductase molybdenum subunit) Length = 918 Score = 30.0 bits (66), Expect = 6.9 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = +2 Query: 86 YVRSTIFSRVTPELITHLNIV*FYGSPNFSEKGNKRNRTFHK 211 Y T ++ V ELI L +V YG F+ G NR FH+ Sbjct: 869 YKNMTHYNSVNAELINPLELVGGYGHVKFAAGGFNPNRIFHE 910
>LFNG_BRARE (Q8JHF2) Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe| (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase) Length = 374 Score = 29.6 bits (65), Expect = 9.0 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = +2 Query: 536 RDCISKRQHDVVSYDNWNAAKYHSLNQPRTPWCPPQRA 649 R+ I+ + V D H L P TPWCPPQ A Sbjct: 336 RNIINMKGAFSVEEDPSRFKSVHCLLYPDTPWCPPQVA 373
>AMIA2_MYCTU (P63490) Putative amidase amiA2 (EC 3.5.1.4)| Length = 484 Score = 29.6 bits (65), Expect = 9.0 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 355 LESDGMHLLVALAAGTTWPSSLMGWRAIFASSGYHQSG 468 L S G + A +TWP +L+GW +I +G+ G Sbjct: 406 LGSFGTDRAIIAACPSTWPWNLLGWPSINVPAGFTSDG 443
>AMIA2_MYCBO (P63491) Putative amidase amiA2 (EC 3.5.1.4)| Length = 484 Score = 29.6 bits (65), Expect = 9.0 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 355 LESDGMHLLVALAAGTTWPSSLMGWRAIFASSGYHQSG 468 L S G + A +TWP +L+GW +I +G+ G Sbjct: 406 LGSFGTDRAIIAACPSTWPWNLLGWPSINVPAGFTSDG 443
>ADML_CANFA (O77559) ADM precursor [Contains: Adrenomedullin (AM);| Proadrenomedullin N-20 terminal peptide (ProAM-N20) (ProAM N-terminal 20 peptide) (PAMP)] Length = 188 Score = 29.6 bits (65), Expect = 9.0 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = -2 Query: 448 RKQRLLANPSMKKAMLFPQP---AQPRDAFHQILNGLAR 341 R++R L P +++ +LFP+P P HQ+L L + Sbjct: 149 RRRRSLPEPGLRRTLLFPEPRPGGAPAPRAHQVLANLLK 187 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,361,657 Number of Sequences: 219361 Number of extensions: 2201327 Number of successful extensions: 6000 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 5789 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5997 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
