ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18m04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473241.1| Oryza sativa (japonica cultivar-group), predic... 192 1e-45
2emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 192 1e-45
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 192 1e-45
4dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
5dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
6dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
7dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
9dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
10dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
11gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 50 0.009
12gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 48 0.035
13gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 48 0.035
14emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 48 0.035
15gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 48 0.035
16ref|XM_493948.1| Oryza sativa (japonica cultivar-group), Ozsa801... 46 0.14
17gb|AC153977.4| Mus musculus 10 BAC RP24-270K22 (Roswell Park Can... 46 0.14
18dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.14
19gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein... 44 0.55
20gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
21gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
22emb|AL627310.5| Human DNA sequence from clone RP11-199P24 on chr... 42 2.2
23gb|CP000264.1| Jannaschia sp. CCS1, complete genome 42 2.2
24dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
25gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
26ref|XM_493953.1| Oryza sativa (japonica cultivar-group), Ozsa801... 40 8.6
27ref|XM_472753.1| Oryza sativa (japonica cultivar-group), predic... 40 8.6
28gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6... 40 8.6
29gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 8.6
30ref|XM_654940.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 8.6
31gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 8.6
32ref|XM_846007.1| PREDICTED: Canis familiaris similar to MAM doma... 40 8.6
33gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete se... 40 8.6
34gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 8.6
35gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 8.6
36emb|AJ544865.1|PTY544865 Bovine viral diarrhea virus strain 3142... 40 8.6
37emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 8.6
38emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 40 8.6
39emb|BX901979.16| Zebrafish DNA sequence from clone DKEY-74C10 in... 40 8.6
40gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 8.6
41gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-1... 40 8.6
42gb|AF112367.1|AF112367 Plasmodium falciparum S-adenosylmethionin... 40 8.6
43dbj|AK104626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
44dbj|AK071020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
45dbj|AK061745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
46gb|AY110668.1| Zea mays CL8874_1 mRNA sequence 40 8.6
47gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 8.6
48dbj|AB028181.1| Oryza sativa mRNA for OsNAC2 protein, complete cds 40 8.6
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 8.6 
>ref|XM_473241.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score =  192 bits (97), Expect = 1e-45
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                       
Query: 417 gctctaccgccacgagaacggctggtacagcaccctgcctccgctggtcggcgccatggt 476
           ||||||||||||||| || ||||||||||| | |||    ||  ||||||| || |||||
Sbjct: 135 gctctaccgccacgacaaaggctggtacagtagcctcatgcctatggtcggtgcgatggt 194

                                                                       
Query: 477 cgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgcccaagtc 536
           |||||||||||| ||||||||||||||||| |||||| ||||||||||  ||||||||||
Sbjct: 195 cgccgacgcgcggttcgccgcgcgcccctccgacatcatcgtcgccaccttgcccaagtc 254

                                                                       
Query: 537 cggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagcacccggc 596
           ||||||||||||||| |||||||| |||||| ||||||| |||||||| |||||||| ||
Sbjct: 255 cggcacgacgtggatcaaggcgctcctctacgccacggtgcaccggagggagcaccccgc 314

                                                  
Query: 597 ---ggccagccccgaccaccctttcaactccctcggccc 632
               |||  | ||||||||||||||||||||||||||||
Sbjct: 315 cgacgccgccgccgaccaccctttcaactccctcggccc 353



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 327 cgacgccgaaaccaacgaagagctctaccggcagttcaccgaactggcgtcctcctggcc 386
           ||||||||||||  |||| || ||||||  ||||||||||||   || ||||||||||||
Sbjct: 48  cgacgccgaaactgacgaggaactctacaagcagttcaccgactcggtgtcctcctggcc 107

                 
Query: 387 gtgctc 392
           | ||||
Sbjct: 108 gagctc 113
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>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10,
             complete sequence
          Length = 141545

 Score =  192 bits (97), Expect = 1e-45
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                         
Query: 417   gctctaccgccacgagaacggctggtacagcaccctgcctccgctggtcggcgccatggt 476
             ||||||||||||||| || ||||||||||| | |||    ||  ||||||| || |||||
Sbjct: 70602 gctctaccgccacgacaaaggctggtacagtagcctcatgcctatggtcggtgcgatggt 70661

                                                                         
Query: 477   cgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgcccaagtc 536
             |||||||||||| ||||||||||||||||| |||||| ||||||||||  ||||||||||
Sbjct: 70662 cgccgacgcgcggttcgccgcgcgcccctccgacatcatcgtcgccaccttgcccaagtc 70721

                                                                         
Query: 537   cggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagcacccggc 596
             ||||||||||||||| |||||||| |||||| ||||||| |||||||| |||||||| ||
Sbjct: 70722 cggcacgacgtggatcaaggcgctcctctacgccacggtgcaccggagggagcaccccgc 70781

                                                    
Query: 597   ---ggccagccccgaccaccctttcaactccctcggccc 632
                 |||  | ||||||||||||||||||||||||||||
Sbjct: 70782 cgacgccgccgccgaccaccctttcaactccctcggccc 70820



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                         
Query: 327   cgacgccgaaaccaacgaagagctctaccggcagttcaccgaactggcgtcctcctggcc 386
             ||||||||||||  |||| || ||||||  ||||||||||||   || ||||||||||||
Sbjct: 70515 cgacgccgaaactgacgaggaactctacaagcagttcaccgactcggtgtcctcctggcc 70574

                   
Query: 387   gtgctc 392
             | ||||
Sbjct: 70575 gagctc 70580
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  192 bits (97), Expect = 1e-45
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                            
Query: 417      gctctaccgccacgagaacggctggtacagcaccctgcctccgctggtcggcgccatggt 476
                ||||||||||||||| || ||||||||||| | |||    ||  ||||||| || |||||
Sbjct: 26294025 gctctaccgccacgacaaaggctggtacagtagcctcatgcctatggtcggtgcgatggt 26294084

                                                                            
Query: 477      cgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgcccaagtc 536
                |||||||||||| ||||||||||||||||| |||||| ||||||||||  ||||||||||
Sbjct: 26294085 cgccgacgcgcggttcgccgcgcgcccctccgacatcatcgtcgccaccttgcccaagtc 26294144

                                                                            
Query: 537      cggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagcacccggc 596
                ||||||||||||||| |||||||| |||||| ||||||| |||||||| |||||||| ||
Sbjct: 26294145 cggcacgacgtggatcaaggcgctcctctacgccacggtgcaccggagggagcaccccgc 26294204

                                                       
Query: 597      ---ggccagccccgaccaccctttcaactccctcggccc 632
                    |||  | ||||||||||||||||||||||||||||
Sbjct: 26294205 cgacgccgccgccgaccaccctttcaactccctcggccc 26294243



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                            
Query: 327      cgacgccgaaaccaacgaagagctctaccggcagttcaccgaactggcgtcctcctggcc 386
                ||||||||||||  |||| || ||||||  ||||||||||||   || ||||||||||||
Sbjct: 26293938 cgacgccgaaactgacgaggaactctacaagcagttcaccgactcggtgtcctcctggcc 26293997

                      
Query: 387      gtgctc 392
                | ||||
Sbjct: 26293998 gagctc 26294003



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 474      ggtcgccgacgcgcgcttcgccgc 497
                |||||||||||| |||||||||||
Sbjct: 22969808 ggtcgccgacgcccgcttcgccgc 22969831
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/164 (89%), Gaps = 3/164 (1%)
 Strand = Plus / Minus

                                                                            
Query: 472      atggtcgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgccc 531
                ||||||||||||| || ||||||||||||||||||||||||||||||| ||||  |||||
Sbjct: 24909430 atggtcgccgacgagctcttcgccgcgcgcccctcggacatcgtcgtccccaccctgccc 24909371

                                                                            
Query: 532      aagtccggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagca- 590
                |||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||| 
Sbjct: 24909370 aagtccggcacgacgtggatcaaggcgctgctctacgccacggtgcaccggagagagcat 24909311

                                                            
Query: 591      cccggcg--gccagccccgaccaccctttcaactccctcggccc 632
                |||| ||  |||  |  ||||||||| |||||||||||||||||
Sbjct: 24909310 cccgccgacgccgccggcgaccaccccttcaactccctcggccc 24909267



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 467     gcgccatggtcgccgacgcgcgcttcg 493
               ||||||||||||||||| |||||||||
Sbjct: 3570745 gcgccatggtcgccgacccgcgcttcg 3570771



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 467     gcgccatggtcgccgacgcgcgcttcgc 494
               ||||||||||||||||| || |||||||
Sbjct: 3582244 gcgccatggtcgccgacccgtgcttcgc 3582217
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>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0530H05
          Length = 145952

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/164 (89%), Gaps = 3/164 (1%)
 Strand = Plus / Minus

                                                                        
Query: 472  atggtcgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgccc 531
            ||||||||||||| || ||||||||||||||||||||||||||||||| ||||  |||||
Sbjct: 3985 atggtcgccgacgagctcttcgccgcgcgcccctcggacatcgtcgtccccaccctgccc 3926

                                                                        
Query: 532  aagtccggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagca- 590
            |||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||| 
Sbjct: 3925 aagtccggcacgacgtggatcaaggcgctgctctacgccacggtgcaccggagagagcat 3866

                                                        
Query: 591  cccggcg--gccagccccgaccaccctttcaactccctcggccc 632
            |||| ||  |||  |  ||||||||| |||||||||||||||||
Sbjct: 3865 cccgccgacgccgccggcgaccaccccttcaactccctcggccc 3822
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>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0072A21
          Length = 158287

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/164 (89%), Gaps = 3/164 (1%)
 Strand = Plus / Minus

                                                                          
Query: 472    atggtcgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgccc 531
              ||||||||||||| || ||||||||||||||||||||||||||||||| ||||  |||||
Sbjct: 120513 atggtcgccgacgagctcttcgccgcgcgcccctcggacatcgtcgtccccaccctgccc 120454

                                                                          
Query: 532    aagtccggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagca- 590
              |||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||| 
Sbjct: 120453 aagtccggcacgacgtggatcaaggcgctgctctacgccacggtgcaccggagagagcat 120394

                                                          
Query: 591    cccggcg--gccagccccgaccaccctttcaactccctcggccc 632
              |||| ||  |||  |  ||||||||| |||||||||||||||||
Sbjct: 120393 cccgccgacgccgccggcgaccaccccttcaactccctcggccc 120350
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>dbj|AK109408.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D04, full
           insert sequence
          Length = 1274

 Score =  168 bits (85), Expect = 1e-38
 Identities = 146/164 (89%), Gaps = 3/164 (1%)
 Strand = Plus / Plus

                                                                       
Query: 472 atggtcgccgacgcgcgcttcgccgcgcgcccctcggacatcgtcgtcgccacgatgccc 531
           ||||||||||||| || ||||||||||||||||||||||||||||||| ||||  |||||
Sbjct: 252 atggtcgccgacgagctcttcgccgcgcgcccctcggacatcgtcgtccccaccctgccc 311

                                                                       
Query: 532 aagtccggcacgacgtggatgaaggcgcttctctactccacggtccaccggagagagca- 590
           |||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||||| 
Sbjct: 312 aagtccggcacgacgtggatcaaggcgctgctctacgccacggtgcaccggagagagcat 371

                                                       
Query: 591 cccggcg--gccagccccgaccaccctttcaactccctcggccc 632
           |||| ||  |||  |  ||||||||| |||||||||||||||||
Sbjct: 372 cccgccgacgccgccggcgaccaccccttcaactccctcggccc 415
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 518      tcgccacgatgcccaagtccggcacgacgtggatgaaggcgct 560
                ||||||| ||||||||||||||| |||||||| | ||||||||
Sbjct: 27987081 tcgccaccatgcccaagtccggctcgacgtggctcaaggcgct 27987039
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>dbj|AP004255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1212_A08
          Length = 119304

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 518   tcgccacgatgcccaagtccggcacgacgtggatgaaggcgct 560
             ||||||| ||||||||||||||| |||||||| | ||||||||
Sbjct: 30743 tcgccaccatgcccaagtccggctcgacgtggctcaaggcgct 30701
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>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1123_G04
          Length = 124666

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                         
Query: 518    tcgccacgatgcccaagtccggcacgacgtggatgaaggcgct 560
              ||||||| ||||||||||||||| |||||||| | ||||||||
Sbjct: 114533 tcgccaccatgcccaagtccggctcgacgtggctcaaggcgct 114491
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 475     gtcgccgacgcgcgcttcgccgcgcgccc 503
               ||||||||||| |||||||||||||||||
Sbjct: 3542317 gtcgccgacgctcgcttcgccgcgcgccc 3542289



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 457    ccgctggtcggcgccatggtcgccg 481
              |||||||||||||||||| ||||||
Sbjct: 846067 ccgctggtcggcgccatgctcgccg 846043
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 479     ccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||||||||||||||||
Sbjct: 1624801 ccgacgcgcgcttcgccgcgcgcc 1624778



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 477    cgccgacgcgcgcttcgccgcgcgcc 502
              ||||||||||| ||||||||||||||
Sbjct: 780854 cgccgacgcgcccttcgccgcgcgcc 780879
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 479     ccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||||||||||||||||
Sbjct: 2871511 ccgacgcgcgcttcgccgcgcgcc 2871488



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 477     cgccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||| ||||||||||||||
Sbjct: 1300958 cgccgacgcgcccttcgccgcgcgcc 1300983
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 479     ccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||||||||||||||||
Sbjct: 2601672 ccgacgcgcgcttcgccgcgcgcc 2601649



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 477     cgccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||| ||||||||||||||
Sbjct: 1205064 cgccgacgcgcccttcgccgcgcgcc 1205089
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 479     ccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||||||||||||||||
Sbjct: 2287419 ccgacgcgcgcttcgccgcgcgcc 2287442



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 477     cgccgacgcgcgcttcgccgcgcgcc 502
               ||||||||||| ||||||||||||||
Sbjct: 1018155 cgccgacgcgcccttcgccgcgcgcc 1018180
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>ref|XM_493948.1| Oryza sativa (japonica cultivar-group), Ozsa8013 predicted mRNA
          Length = 990

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 467 gcgccatggtcgccgacgcgcgcttcg 493
           ||||||||||||||||| |||||||||
Sbjct: 488 gcgccatggtcgccgacccgcgcttcg 514
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>gb|AC153977.4| Mus musculus 10 BAC RP24-270K22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 163035

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 127   acacaaaagatttatatttatag 149
             |||||||||||||||||||||||
Sbjct: 65722 acacaaaagatttatatttatag 65744
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>dbj|AP002071.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0675A05
          Length = 131972

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 467   gcgccatggtcgccgacgcgcgcttcg 493
             ||||||||||||||||| |||||||||
Sbjct: 62582 gcgccatggtcgccgacccgcgcttcg 62608



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 467   gcgccatggtcgccgacgcgcgcttcgc 494
             ||||||||||||||||| || |||||||
Sbjct: 74081 gcgccatggtcgccgacccgtgcttcgc 74054
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>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene,
            complete cds
          Length = 25080

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 5    gcgttgggtcgacttttatgtccgcgccgacctaaacg 42
            ||||| || |||||||| ||||| ||||||||||||||
Sbjct: 1136 gcgttaggccgacttttgtgtccacgccgacctaaacg 1173
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>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAa0068G15, complete sequence
          Length = 130161

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 529   cccaagtccggcacgacgtggatgaaggcgcttctctactc 569
             |||||||||||||| || ||||| || |||||||| |||||
Sbjct: 42749 cccaagtccggcaccacttggatcaaagcgcttctgtactc 42709
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>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15,
              complete sequence
          Length = 146175

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 529    cccaagtccggcacgacgtggatgaaggcgcttctctactc 569
              |||||||||||||| || ||||| || |||||||| |||||
Sbjct: 128923 cccaagtccggcaccacttggatcaaagcgcttctgtactc 128883
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>emb|AL627310.5| Human DNA sequence from clone RP11-199P24 on chromosome 1, complete
             sequence
          Length = 139407

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 130   caaaagatttatatttatagaataa 154
             ||||||| |||||||||||||||||
Sbjct: 55406 caaaagaattatatttatagaataa 55430
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 475    gtcgccgacgcgcgcttcgcc 495
              |||||||||||||||||||||
Sbjct: 162623 gtcgccgacgcgcgcttcgcc 162603



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   tcgccgacgcgcgcttcgcc 495
             ||||||||||||||||||||
Sbjct: 83096 tcgccgacgcgcgcttcgcc 83077
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 529     cccaagtccggcacgacgtggatgaaggcgcttctctactc 569
               |||||||||||||| || ||||| || |||||||| |||||
Sbjct: 1911093 cccaagtccggcaccacttggatcaaagcgcttctgtactc 1911053
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                        
Query: 529     cccaagtccggcacgacgtggatgaaggcgcttctctactc 569
               |||||||||||||| || ||||| || |||||||| |||||
Sbjct: 1908814 cccaagtccggcaccacttggatcaaagcgcttctgtactc 1908774
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>ref|XM_493953.1| Oryza sativa (japonica cultivar-group), Ozsa8018 predicted mRNA
          Length = 1257

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 467 gcgccatggtcgccgacgcgcgcttcgc 494
           ||||||||||||||||| || |||||||
Sbjct: 158 gcgccatggtcgccgacccgtgcttcgc 185
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>ref|XM_472753.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 474 ggtcgccgacgcgcgcttcgccgc 497
           |||||||||||| |||||||||||
Sbjct: 99  ggtcgccgacgcccgcttcgccgc 122
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>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete
             sequence
          Length = 253001

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 132   aaagatttatatttatagaataat 155
             |||||||||||||||||| |||||
Sbjct: 69624 aaagatttatatttataggataat 69647
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 480     cgacgcgcgcttcgccgcgcgccc 503
               ||||||||||||||||| ||||||
Sbjct: 2554863 cgacgcgcgcttcgccgtgcgccc 2554840



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 478    gccgacgcgcgcttcgccgcgcgc 501
              |||||||||||| |||||||||||
Sbjct: 563094 gccgacgcgcgcatcgccgcgcgc 563071



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 480    cgacgcgcgcttcgccgcgcgccc 503
              ||||||||||||||||| ||||||
Sbjct: 523783 cgacgcgcgcttcgccgtgcgccc 523806
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>ref|XM_654940.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2428.2), mRNA
          Length = 4191

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  ctgccgtaaaatgtcctcctccat 302
            |||||||||||| |||||||||||
Sbjct: 2166 ctgccgtaaaatctcctcctccat 2143
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 525     gatgcccaagtccggcacga 544
               ||||||||||||||||||||
Sbjct: 3705311 gatgcccaagtccggcacga 3705292
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>ref|XM_846007.1| PREDICTED: Canis familiaris similar to MAM domain containing 2
           (LOC608871), mRNA
          Length = 2061

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 ggcgtcctcctggccgtgct 391
           ||||||||||||||||||||
Sbjct: 13  ggcgtcctcctggccgtgct 32
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>gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete sequence
          Length = 122810

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    aacacaaaagatttatattt 145
              ||||||||||||||||||||
Sbjct: 110590 aacacaaaagatttatattt 110571
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 458     cgctggtcggcgccatggtc 477
               ||||||||||||||||||||
Sbjct: 1876350 cgctggtcggcgccatggtc 1876369
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 460     ctggtcggcgccatggtcgc 479
               ||||||||||||||||||||
Sbjct: 1055006 ctggtcggcgccatggtcgc 1054987
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>emb|AJ544865.1|PTY544865 Bovine viral diarrhea virus strain 3142 partial NS2-3 gene for
            hypothetical protein, genomic RNA
          Length = 3471

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 600  cagccccgaccaccctttca 619
            ||||||||||||||||||||
Sbjct: 1917 cagccccgaccaccctttca 1898
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 478     gccgacgcgcgcttcgccgcgcgc 501
               |||||||||||| |||||||||||
Sbjct: 1882421 gccgacgcgcgcatcgccgcgcgc 1882398



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 480     cgacgcgcgcttcgccgcgcgccc 503
               ||||||||||||||||| ||||||
Sbjct: 1843049 cgacgcgcgcttcgccgtgcgccc 1843072



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 480    cgacgcgcgcttcgccgcgcgccc 503
              ||||||||||||||||| ||||||
Sbjct: 734908 cgacgcgcgcttcgccgtgcgccc 734885
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>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
             complete sequence
          Length = 176383

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 474   ggtcgccgacgcgcgcttcgccgc 497
             |||||||||||| |||||||||||
Sbjct: 64264 ggtcgccgacgcccgcttcgccgc 64287
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>emb|BX901979.16| Zebrafish DNA sequence from clone DKEY-74C10 in linkage group 13,
            complete sequence
          Length = 115885

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  acacaaaagatttatattta 146
            ||||||||||||||||||||
Sbjct: 3360 acacaaaagatttatattta 3379
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 480    cgacgcgcgcttcgccgcgcgccc 503
              ||||||||||||||||| ||||||
Sbjct: 940859 cgacgcgcgcttcgccgtgcgccc 940836



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 480    cgacgcgcgcttcgccgcgcgccc 503
              ||||||||||||||||| ||||||
Sbjct: 465802 cgacgcgcgcttcgccgtgcgccc 465779
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>gb|AC147481.3| Medicago truncatula chromosome 2 BAC clone mth2-138b18, complete sequence
          Length = 128810

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    cacaaaagatttatatttat 147
              ||||||||||||||||||||
Sbjct: 115670 cacaaaagatttatatttat 115689
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>gb|AF112367.1|AF112367 Plasmodium falciparum S-adenosylmethionine decarboxylase-ornithine
            decarboxylase gene, complete cds
          Length = 7622

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 132  aaagatttatatttatagaataat 155
            |||||||||||||||||| |||||
Sbjct: 1191 aaagatttatatttataggataat 1168
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>dbj|AK104626.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B03, full
           insert sequence
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 474 ggtcgccgacgcgcgcttcgccgc 497
           |||||||||||| |||||||||||
Sbjct: 203 ggtcgccgacgcccgcttcgccgc 226
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>dbj|AK071020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H09, full
           insert sequence
          Length = 1548

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 474 ggtcgccgacgcgcgcttcgccgc 497
           |||||||||||| |||||||||||
Sbjct: 206 ggtcgccgacgcccgcttcgccgc 229
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>dbj|AK061745.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F10, full
           insert sequence
          Length = 1401

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 474 ggtcgccgacgcgcgcttcgccgc 497
           |||||||||||| |||||||||||
Sbjct: 203 ggtcgccgacgcccgcttcgccgc 226
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>gb|AY110668.1| Zea mays CL8874_1 mRNA sequence
          Length = 1522

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 374  cgtcctcctggccgtgctcc 393
            ||||||||||||||||||||
Sbjct: 1288 cgtcctcctggccgtgctcc 1307
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 480    cgacgcgcgcttcgccgcgc 499
              ||||||||||||||||||||
Sbjct: 288791 cgacgcgcgcttcgccgcgc 288772
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>dbj|AB028181.1| Oryza sativa mRNA for OsNAC2 protein, complete cds
          Length = 1377

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 474 ggtcgccgacgcgcgcttcgccgc 497
           |||||||||||| |||||||||||
Sbjct: 198 ggtcgccgacgcccgcttcgccgc 221
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 534     gtccggcacgacgtggatga 553
               ||||||||||||||||||||
Sbjct: 1465049 gtccggcacgacgtggatga 1465030


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,202,147
Number of Sequences: 3902068
Number of extensions: 4202147
Number of successful extensions: 79464
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77729
Number of HSP's gapped (non-prelim): 1735
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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