>FILA_MOUSE (P11088) Filaggrin (Fragment)|
          Length = 336

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
 Frame = -2

Query: 582 QGHEVEHQHQGRGGLPRLRHREQ-----GHWPGHQ------ALPRPVPPCASGAVQPGLP 436
           +GH+ +HQHQ     P   HR+Q     GH   HQ      A PR      S +      
Sbjct: 176 RGHQHQHQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARPRGSNQGHSSSRHQADS 235

Query: 435 GRVGAVDGEQGRGQ 394
            RV A  G  GRGQ
Sbjct: 236 PRVSARSGSGGRGQ 249

>ACSA_DROME (Q9VP61) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase)
           (ACS) (AceCS)
          Length = 670

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 506 GQAIKHSLGQSHPVRLVPYNPDFLDESVLWTESRD 402
           G +++  +  SH  R+ P  PD ++E + WT+ RD
Sbjct: 221 GHSVEKCIVVSHLKRVTPCQPDHVEEEIPWTDDRD 255

>SPD2_NEPCL (P46804) Spidroin 2 (Dragline silk fibroin 2) (Fragment)|
          Length = 627

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -2

Query: 555 QGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQG 403
           QG GG    +    G+ PG Q L  P    A+ A  PG  G  G   G+QG
Sbjct: 218 QGPGGYGPGQQGPGGYGPGQQGLSGPGSAAAAAAAGPGQQGPGGYGPGQQG 268

>SYK_HAEDU (Q7VLU5) Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase)|
           (LysRS)
          Length = 498

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
 Frame = -3

Query: 557 IKDEEGYPAFAIVNKATGQAIKHSLGQ-----SHPVRLVPY------NPDFLDESVLWTE 411
           I+ ++ +   A+VN    +  +H L Q     +HP  + P       NP+  D   L+  
Sbjct: 354 IEVQKSWGLGAVVNAIFEEVAEHQLIQPTFLMAHPAEISPLARRNDENPEVTDRFELFIG 413

Query: 410 SRDVGNGFRCVRMVNNIYLNFDA 342
            R++GNGF  +    +    FDA
Sbjct: 414 GREIGNGFSELNDAEDQAARFDA 436

>ADA10_XENLA (Q8JIY1) ADAM 10 precursor (EC 3.4.24.81) (A disintegrin and|
           metalloproteinase domain 10) (Kuzbanian protein homolog)
           (xKuz)
          Length = 749

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = +3

Query: 33  YKHNGSVILRRRE--RLARDACMLFIRDSPHRFFSRYVRTHERGYADACPRVRA 188
           ++ +G VILR++   +  ++ C LFI+ + H F+ RY  T E   A     V+A
Sbjct: 201 HEDSGPVILRKKRAAQAEKNTCQLFIQ-TDHLFYKRYGETREAVIAQISSHVKA 253

>ELN_RAT (Q99372) Elastin precursor (Tropoelastin)|
          Length = 870

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/50 (44%), Positives = 22/50 (44%)
 Frame = -2

Query: 552 GRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAVDGEQG 403
           G GG   L     G  PG  ALP  VP    GAV   LPG V  V G  G
Sbjct: 490 GAGGAGTLGGLVPGAVPG--ALPGAVPGALPGAVPGALPGAVPGVPGTGG 537

>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +2

Query: 404 PCSPSTAPTRPGSPGCTAPDAQGGTGRGSA*WPG 505
           P  PS  P  PGSPG + P  +G  G     WPG
Sbjct: 370 PQGPSGPPGVPGSPGSSRPGLRGAPG-----WPG 398

>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2|
          Length = 916

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 18/39 (46%), Positives = 19/39 (48%)
 Frame = +2

Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRGSA*WPG 505
           S  PRP     AP RPGSP   AP   GG  +G    PG
Sbjct: 195 SNIPRP-----APPRPGSPRIGAPRPGGGQRQGGGGRPG 228

>IF2_MYCTU (P65131) Translation initiation factor IF-2|
          Length = 900

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 487
           +R PRP +P     RPG+PG    DA GG  RG
Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234

>IF2_MYCBO (P65132) Translation initiation factor IF-2|
          Length = 900

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = +2

Query: 389 SRCPRPCSPSTAPTRPGSPGCTAPDAQGGTGRG 487
           +R PRP +P     RPG+PG    DA GG  RG
Sbjct: 203 ARPPRPGAPRPGG-RPGAPGAGRSDAGGGNYRG 234

>XYNA_STRLI (P26514) Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) (Xylanase|
           A) (1,4-beta-D-xylan xylanohydrolase A)
          Length = 477

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -3

Query: 308 DGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCM------HGSRTYAWTCIG 162
           DGT++ LW    G NQ+W       AG+     D+C+      +GS+   ++C G
Sbjct: 374 DGTQLQLWDCHSGTNQQWAATD---AGELRVYGDKCLDAAGTSNGSKVQIYSCWG 425

>META_ERWCT (Q6D009) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine|
           O-transsuccinylase) (HTS)
          Length = 309

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = -3

Query: 467 VRLVPYNPDFLDESVLWTESRDVGNGFRCVRMVNNIYLNFDALNGDKYHGGVRDGTEVVL 288
           +RL+  +P  +D  +L  +SR+  N       +NN Y NFD +  + + G +  G  + L
Sbjct: 55  LRLLSNSPLQIDIQLLRIDSRESKN--TPTEHLNNFYCNFDDIQDENFDGLIVTGAPLGL 112

Query: 287 WKWCE 273
             +C+
Sbjct: 113 VDFCD 117

>SPR2F_MOUSE (O70557) Small proline-rich protein 2F|
          Length = 76

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +2

Query: 392 RCPRPCSPSTAPTRPGSPGCTAP 460
           +CP PCSPS  P     P C  P
Sbjct: 22  KCPEPCSPSVCPEPCPPPKCPEP 44

>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
 Frame = -2

Query: 582 QGHEVEHQHQGRGGLPRL-----RHREQGHWPGHQALPRPVPPCASGAVQPGLPGRVGAV 418
           QG E  +Q +  G  P       +++ +G     QA P P+PP  +G+++ G  G+ G V
Sbjct: 357 QGQEGGYQQRPPGQQPNQTQSQGQYQSRGPPQQQQAAPLPLPPQPAGSIKRGTIGKPGQV 416

>COL2_CAEEL (P17656) Cuticle collagen 2 precursor|
          Length = 301

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +2

Query: 398 PRPCSPSTAPTRPGSPGCT-APDAQGGTGRGSA 493
           P P  P  +P +PG PG   AP A G  G+G++
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGAS 136

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 582 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 409
           +G +  +  +G  G P L+   +   PG    P P+ P  +   +  PGLPG  GA   +
Sbjct: 266 RGFDGRNGEKGETGAPGLKG--ENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGND 323

Query: 408 QGRG 397
             RG
Sbjct: 324 GARG 327

>MUC1_HUMAN (P15941) Mucin-1 precursor (MUC-1) (Polymorphic epithelial mucin)|
            (PEM) (PEMT) (Episialin) (Tumor-associated mucin)
            (Carcinoma-associated mucin) (Tumor-associated epithelial
            membrane antigen) (EMA) (H23AG) (Peanut-reactive urinary
            mucin) (PUM)
          Length = 1255

 Score = 25.0 bits (53), Expect(2) = 7.9
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 10/36 (27%)
 Frame = +2

Query: 401  RPCSPSTAP----------TRPGSPGCTAPDAQGGT 478
            RP   STAP          TRP +PG TAP A G T
Sbjct: 905  RPAPGSTAPPAHGVTSAPDTRP-APGSTAPPAHGVT 939



 Score = 23.1 bits (48), Expect(2) = 7.9
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +3

Query: 465  HRVGLAEGVLDGLASGLVHDG 527
            H V  A G   G AS LVH+G
Sbjct: 956  HNVTSASGSASGSASTLVHNG 976

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 582 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 409
           +G +  +  +G  G P L+   +   PG    P P+ P  +   +  PGLPG  GA   +
Sbjct: 265 RGFDGRNGEKGETGAPGLKG--ENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGND 322

Query: 408 QGRG 397
             RG
Sbjct: 323 GARG 326

>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 582 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 409
           +G +  +  +G  G P L+   +   PG    P P+ P  +   +  PGLPG  GA   +
Sbjct: 110 RGFDGRNGEKGEPGAPGLKG--ENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGND 167

Query: 408 QGRG 397
             RG
Sbjct: 168 GARG 171

>LEG3_RABIT (P47845) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)|
           (IgE-binding protein) (35 kDa lectin)
           (Carbohydrate-binding protein 35) (CBP 35)
           (Laminin-binding protein) (Lectin L-29)
          Length = 241

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
 Frame = -2

Query: 564 HQHQGRGGLPRLRHREQGHWPGH-------QALPRPVPPCASGAVQPGLPGRVGA 421
           +Q  G GG P   +   G +PGH       QA P P P   +    PG PG  GA
Sbjct: 27  NQPAGPGGYPGAAY--PGAYPGHAPGAYPGQAPPGPYPGPGAHGAYPGQPGGPGA 79

>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 582 QGHEVEHQHQGRGGLPRLRHREQGHWPGHQALPRPVPPCASGAVQ--PGLPGRVGAVDGE 409
           +G +  +  +G  G P L+   +   PG    P P+ P  +   +  PGLPG  GA   +
Sbjct: 265 RGFDGRNGEKGETGAPGLKG--ENGLPGDNGAPGPMGPRGAPGERGRPGLPGAAGARGND 322

Query: 408 QGRG 397
             RG
Sbjct: 323 GARG 326

>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial|
           collagen)
          Length = 744

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 26/78 (33%), Positives = 31/78 (39%), Gaps = 16/78 (20%)
 Frame = -2

Query: 555 QGRGGLPRLRHREQGHWPGHQALPR----------PVPPCASGAVQPGLPG-----RVGA 421
           QG  GLP +    Q   PG    P           P PP   G  +PG PG      +G 
Sbjct: 307 QGPPGLPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGDRGIGG 366

Query: 420 VDGEQG-RGQRLQVRAHG 370
           V G  G RG++  V A G
Sbjct: 367 VPGALGPRGEKGPVGAPG 384

>HA33_CLOBO (P46084) Main hemagglutinin component (HA 33 kDa subunit) (HA1)|
          Length = 285

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = -3

Query: 341 LNGDKYHGGVRDGTEVVLWKWCEGDNQRWKIQPYY*AGQRAPCMDRCMHGSRTYAW 174
           LN D++     +   +VLW+W +   Q+W I+  Y   + A  + +C   +R   W
Sbjct: 157 LNSDRFLSKNLNSQIIVLWQWFDSSRQKWIIE--YNETKSAYTL-KCQENNRYLTW 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,684,953
Number of Sequences: 219361
Number of extensions: 1872426
Number of successful extensions: 8038
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 6933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7984
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)