Clone Information

BLAST Search Result

Clone Name	rbasd18h12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	gb\|AY266443.1\| Hordeum vulgare MLA13-2 (Mla13-2) gene and LINE e...	545	e-152
2	gb\|AY266442.1\| Hordeum vulgare LINE element Lauren, partial sequ...	545	e-152
3	gb\|AF427791.1\| Hordeum vulgare Mla locus, complete sequence	545	e-152
4	gb\|AY009938.2\| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) ge...	545	e-152
5	gb\|AF509775.1\| Hordeum vulgare subsp. vulgare isolate RSB409A Rp...	521	e-145
6	gb\|AF521177.1\| Hordeum vulgare contig 211252, complete sequence	507	e-140
7	gb\|AF509768.1\| Hordeum vulgare subsp. vulgare isolate NRG026 Rpg...	505	e-140
8	gb\|AY643843.1\|AY643842S2 Hordeum vulgare subsp. vulgare clones B...	440	e-120
9	ref\|XM_483605.1\| Oryza sativa (japonica cultivar-group), mRNA	46	0.15
10	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
11	dbj\|AP003914.3\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
12	dbj\|AP004632.3\| Oryza sativa (japonica cultivar-group) genomic D...	46	0.15
13	dbj\|AK121394.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	46	0.15
14	emb\|AJ325463.1\|HSA325463 Homo sapiens genomic sequence surroundi...	44	0.61
15	gb\|AC132106.4\| Mus musculus BAC clone RP24-240D2 from chromosome...	42	2.4
16	dbj\|AP008208.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.4
17	gb\|AC004241.2\| Homo sapiens 12 PAC RP3-197B17 (Roswell Park Canc...	42	2.4
18	dbj\|AP005476.3\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.4
19	gb\|AY664417.1\| Zea mays cultivar Mo17 locus 9002, complete sequence	42	2.4
20	gb\|AC118547.41\| Mus musculus strain C57BL/6J clone rp23-3g4 map ...	42	2.4
21	emb\|AL589902.18\| Mouse DNA sequence from clone RP23-108D12 on ch...	42	2.4
22	gb\|AC115871.8\| Mus musculus chromosome 5, clone RP24-343A12, com...	40	9.5
23	ref\|XM_518016.1\| PREDICTED: Pan troglodytes similar to leucyl-tR...	40	9.5
24	gb\|U25997.1\|HSU25997 Homo sapiens stanniocalcin precursor (STC) ...	40	9.5
25	ref\|NM_003155.2\| Homo sapiens stanniocalcin 1 (STC1), mRNA	40	9.5
26	gb\|AC159545.18\| Mus musculus 6 BAC RP23-244E8 (Roswell Park Canc...	40	9.5
27	gb\|AC102734.11\| Mus musculus chromosome 6, clone RP24-222N4, com...	40	9.5
28	gb\|AC005039.1\| Homo sapiens BAC clone RP11-512E16 from 7, comple...	40	9.5
29	gb\|AC142315.1\| Pan troglodytes BAC clone RP43-48P12 from 7, comp...	40	9.5
30	gb\|CP000302.1\| Shewanella denitrificans OS217, complete genome	40	9.5
31	gb\|CP000284.1\| Methylobacillus flagellatus KT, complete genome	40	9.5
32	gb\|CP000270.1\| Burkholderia xenovorans LB400 chromosome 1, compl...	40	9.5
33	gb\|AF165145.4\| Homo sapiens chromosome 8 clone GS1-194o16 map 8p...	40	9.5
34	gb\|AF242179.1\| Homo sapiens stanniocalcin 1 (STC1) gene, exons 1...	40	9.5
35	gb\|AY228381.1\| Phalanger orientalis 16S ribosomal RNA gene, comp...	40	9.5
36	gb\|AC153625.2\| Mus musculus 6 BAC RP23-277O13 (Roswell Park Canc...	40	9.5
37	gb\|AC159912.9\| Mus musculus 6 BAC RP24-314B1 (Roswell Park Cance...	40	9.5
38	gb\|AF356651.1\|AF356651 Pichia pastoris Sec7p (SEC7) gene, comple...	40	9.5
39	gb\|AC114661.13\| Mus musculus chromosome 5, clone RP24-166I7, com...	40	9.5
40	gb\|AC012119.8\| Homo sapiens chromosome 8, clone RP11-175E9, comp...	40	9.5
41	gb\|AC124069.7\| Homo sapiens chromosome 8, clone RP11-326L2, comp...	40	9.5
42	emb\|BX855594.2\| Mouse DNA sequence from clone RP24-322M2 on chro...	40	9.5
43	dbj\|AP006615.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
44	dbj\|AP005933.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	9.5
45	emb\|CT573326.1\| Pseudomonas entomophila str. L48 chromosome,comp...	40	9.5
46	gb\|AY664413.1\| Zea mays cultivar B73 locus 9002, complete sequence	40	9.5
47	dbj\|AP006249.1\| Homo sapiens genomic DNA, chromosome 8, clone:RP...	40	9.5
48	gb\|AC153381.2\| Mus musculus 6 BAC RP23-397L23 (Roswell Park Canc...	40	9.5
49	dbj\|AB020864.1\| Homo sapiens genomic DNA of 8p21.3-p22 anti-onco...	40	9.5

>gb|AY266443.1| Hordeum vulgare MLA13-2 (Mla13-2) gene and LINE element Lauren, partial
             sequence; Copia/Ty1-like retrotransposon HORPIA-4 and
             Copia/Ty1-like retrotransposon HORPIA-5, complete sequence
          Length = 18901

 Score =  545 bits (275), Expect = e-152
 Identities = 291/295 (98%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                         
Query: 12    taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 11397 taggattaggaaagaaagccaaaccgagtcctagtagtattaggattcctagtcctagtc 11456

                                                                         
Query: 71    tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 130
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 11457 tatttccatagtcccttgtggacgtgtataaaagacaccctaggggttttgattgtaaca 11516

                                                                         
Query: 131   ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 190
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11517 ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 11576

                                                                         
Query: 191   catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaag 250
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 11577 catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccgaag 11636

                                                                    
Query: 251   caagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaaca 305
             ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 11637 caagaatcgcgtaggcacgcctgtacagctgcatatgcacgttcaaaagccaaca 11691



 Score =  533 bits (269), Expect = e-148
 Identities = 291/297 (97%), Gaps = 1/297 (0%)
 Strand = Plus / Plus

                                                                         
Query: 12    taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
             ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 16780 taggattagaaaacaaagccaaaccgagtcctagtagtattaggattcctagtcctagtc 16839

                                                                         
Query: 71    tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 130
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16840 tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 16899

                                                                         
Query: 131   ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 190
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16900 ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 16959

                                                                         
Query: 191   catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaag 250
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 16960 catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccgaag 17019

                                                                      
Query: 251   caagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaacagg 307
             ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 17020 caagaatcgcgtaggcacgcctgtatagctgcatacgcacattcaaaagccaacagg 17076

to top

>gb|AY266442.1| Hordeum vulgare LINE element Lauren, partial sequence; MLA6-2 (Mla6-2)
             gene, complete cds, alternatively spliced; Copia/Ty1-like
             retrotransposon HORPIA-4 and Copia/Ty1-like
             retrotransposon HORPIA-5, complete sequence
          Length = 17053

 Score =  545 bits (275), Expect = e-152
 Identities = 291/295 (98%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                         
Query: 12    taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 10133 taggattaggaaagaaagccaaaccgagtcctagtagtattaggattcctagtcctagtc 10192

                                                                         
Query: 71    tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 130
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 10193 tatttccatagtcccttgtggacgtgtataaaagacaccctaggggttttgattgtaaca 10252

                                                                         
Query: 131   ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 190
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10253 ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 10312

                                                                         
Query: 191   catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaag 250
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 10313 catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccgaag 10372

                                                                    
Query: 251   caagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaaca 305
             ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 10373 caagaatcgcgtaggcacgcctgtacagctgcatatgcacgttcaaaagccaaca 10427



 Score =  533 bits (269), Expect = e-148
 Identities = 291/297 (97%), Gaps = 1/297 (0%)
 Strand = Plus / Plus

                                                                         
Query: 12    taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
             ||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 15516 taggattagaaaacaaagccaaaccgagtcctagtagtattaggattcctagtcctagtc 15575

                                                                         
Query: 71    tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 130
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15576 tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 15635

                                                                         
Query: 131   ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 190
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15636 ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 15695

                                                                         
Query: 191   catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaag 250
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 15696 catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccgaag 15755

                                                                      
Query: 251   caagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaacagg 307
             ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 15756 caagaatcgcgtaggcacgcctgtatagctgcatacgcacattcaaaagccaacagg 15812

to top

>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score =  545 bits (275), Expect = e-152
 Identities = 299/306 (97%), Gaps = 1/306 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgttgctnatgtaggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcc 59
              ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 184547 tgttgctcatgtaggattaggaaagaaagccaaaccgagtcctagtagtattagaattcc 184488

                                                                          
Query: 60     tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 119
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184487 tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 184428

                                                                          
Query: 120    tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184427 tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 184368

                                                                          
Query: 180    gccatcaaatccatcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagta 239
              |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184367 gccatcaaattcattgatcagttttattcgtgtcgctagttacgcaagttccgtcaagta 184308

                                                                          
Query: 240    gccggccaaagcaagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaag 299
              ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 184307 gccggccgaagcaagaatcgcgtaggcacgcctgtacggctgcatacgcacgttcaaaag 184248

                    
Query: 300    ccaaca 305
              ||||||
Sbjct: 184247 ccaaca 184242



 Score =  539 bits (272), Expect = e-150
 Identities = 293/299 (97%), Gaps = 1/299 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgttgctnatgtaggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcc 59
              ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 179736 tgttgctcatgtaggattaggaaagaaagccaaaccgagtcctagtagtattaggattcc 179677

                                                                          
Query: 60     tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 119
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179676 tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 179617

                                                                          
Query: 120    tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 179
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179616 tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 179557

                                                                          
Query: 180    gccatcaaatccatcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagta 239
              |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179556 gccatcaaattcattgatcagttttattcgtgtcgctagttacgcaagttccgtcaagta 179497

                                                                         
Query: 240    gccggccaaagcaagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaa 298
              ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 179496 gccggccgaagcaagaatcgcgtaggcacgcctgtacggctgcatacgcacgttcaaaa 179438

to top

>gb|AY009938.2| Hordeum vulgare subsp. vulgare MLA1-2 (Mla1-2) gene, partial cds; and
             MLA1 (Mla1) gene, complete cds
          Length = 18958

 Score =  545 bits (275), Expect = e-152
 Identities = 299/306 (97%), Gaps = 1/306 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgttgctnatgtaggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcc 59
             ||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 14559 tgttgctcatgtaggattaggaaagaaagccaaaccgagtcctagtagtattagaattcc 14618

                                                                         
Query: 60    tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 119
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14619 tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 14678

                                                                         
Query: 120   tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 179
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14679 tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 14738

                                                                         
Query: 180   gccatcaaatccatcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagta 239
             |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14739 gccatcaaattcattgatcagttttattcgtgtcgctagttacgcaagttccgtcaagta 14798

                                                                         
Query: 240   gccggccaaagcaagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaag 299
             ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14799 gccggccgaagcaagaatcgcgtaggcacgcctgtacggctgcatacgcacgttcaaaag 14858

                   
Query: 300   ccaaca 305
             ||||||
Sbjct: 14859 ccaaca 14864

to top

>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic
            sequence
          Length = 7321

 Score =  521 bits (263), Expect = e-145
 Identities = 288/295 (97%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2218 taggattaggaaagaaagccaaaccgagtcctagtagtattaggattcctagtcctagtc 2277

                                                                        
Query: 71   tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 130
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2278 tattttcatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 2337

                                                                        
Query: 131  ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 190
            ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 2338 ccagaaaaacgaaaagcaatacaaagcaaaggcacgacacgagcctttagccatcaaatc 2397

                                                                        
Query: 191  catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaag 250
            |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 2398 catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagcctgccgaag 2457

                                                                   
Query: 251  caagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaaca 305
            |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2458 caagaatcgcgtaggcacgcctgtacagctgcatacgcactttcaaaagccaaca 2512

to top

>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score =  507 bits (256), Expect = e-140
 Identities = 296/307 (96%), Gaps = 2/307 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgttgctnatgtaggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcc 59
            ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3339 tgttgctcatgtaggattaggaaagaaagccaaaccgagtcctagtagtattaggattcc 3280

                                                                        
Query: 60   tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3279 tagtcctagtctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgt 3220

                                                                        
Query: 120  tgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttta 179
            ||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 3219 tgactgtaacaccagaaaaacgaaaagcaatacaaagcaaaagctcgacacgtgccttta 3160

                                                                        
Query: 180  gccatcaaatccatcgatcag-ttttattcgtgtcgctagttacgcaagttccgtcaagt 238
            ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 3159 gccatcaaatccatcgatcagtttttattcgtgtcgctagttacgcaagtaccgtcaagt 3100

                                                                        
Query: 239  agccggccaaagcaagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaa 298
            |||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 3099 agccggtcgaagcaagaatcgtgtaggcacgcctgtacagctacatacgcacgttcaaaa 3040

                   
Query: 299  gccaaca 305
            |||||||
Sbjct: 3039 gccaaca 3033



 Score =  502 bits (253), Expect = e-139
 Identities = 297/308 (96%), Gaps = 3/308 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    tgttgctnatgtaggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcc 59
            ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8158 tgttgctcatgtaggattaggaaagaaagccaaaccgagtcctagtagtattaggattcc 8099

                                                                        
Query: 60   tagtcctagtctatttccatagtcccttg-tggacgtgtataaaagacaccctaggggtg 118
            |||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 8098 tagtcctagtctatttccgtaggcccttggtggacgtgtataaaagacaccctaggggtg 8039

                                                                        
Query: 119  ttgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggccttt 178
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 8038 ttgattgtaacaccagaaaaacgaaaagcaatacaaagcaaaagctcgacacgggccttt 7979

                                                                        
Query: 179  agccatcaaatccatcgatcag-ttttattcgtgtcgctagttacgcaagttccgtcaag 237
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 7978 agccatcaaatccatcgatcagtttttattcgtgtcgctagttacgcaagttccgtcaag 7919

                                                                        
Query: 238  tagccggccaaagcaagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaa 297
            ||||||||| |||||||||| | |||||||||||||||||||| ||||||||||||||||
Sbjct: 7918 tagccggccgaagcaagaattgtgtaggcacgcctgtacagctacatacgcacgttcaaa 7859

                    
Query: 298  agccaaca 305
            ||||||||
Sbjct: 7858 agccaaca 7851

to top

>gb|AF509768.1| Hordeum vulgare subsp. vulgare isolate NRG026 Rpg1 region, genomic
            sequence
          Length = 5371

 Score =  505 bits (255), Expect = e-140
 Identities = 286/295 (96%), Gaps = 1/295 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
            |||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||
Sbjct: 3682 taggattaggaaagaaagccaaaccaagtcctagtagtattaggattcctagtcctaatc 3741

                                                                        
Query: 71   tatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 130
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3742 tattttcatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaaca 3801

                                                                        
Query: 131  ccagaaaaacgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatc 190
            ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 3802 ccagaaaaacgaaaagcaatacaaagcaaaggcacgacacgagcctttagccatcaaatc 3861

                                                                        
Query: 191  catcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaag 250
            |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 3862 catcgatcagttttattcgtgtcgctagttacacaagttccgtcaagtagccggccgaag 3921

                                                                   
Query: 251  caagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaaca 305
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3922 caagaatcgcgtaggcacgcctttacagctgcatacgcacgttcaaaagccaaca 3976

to top

>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score =  440 bits (222), Expect = e-120
 Identities = 281/298 (94%), Gaps = 2/298 (0%)
 Strand = Plus / Plus

                                                                         
Query: 10    tgtaggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctag 68
             |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||
Sbjct: 22704 tgtaggattaggaaagaaagccaaaccgagtcctagtagtattaggatacctagtcttag 22763

                                                                         
Query: 69    tctatttccatagtcccttgtggacgtgtataaaagacaccctaggggtgttgattgtaa 128
             ||||||| ||||||||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct: 22764 tctattttcatagtcccttgtggacgtgtataagaggcaccctaggggtgttgcttgtaa 22823

                                                                         
Query: 129   caccagaaaaa-cgaaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaa 187
             ||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 22824 caccagaaaaaacgaacaacaatacaaagcaaaggctcgacacgggcctttagccatcaa 22883

                                                                         
Query: 188   atccatcgatcagttttattcgtgtcgctagttacgcaagttccgtcaagtagccggcca 247
             |||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||| || 
Sbjct: 22884 atccatcggtcaattttattcgtgtcgctagttatgcaagttcagtcaagtagccgaccg 22943

                                                                       
Query: 248   aagcaagaatcgcgtaggcacgcctgtacagctgcatacgcacgttcaaaagccaaca 305
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 22944 aagcaagaatcgcgtaggcacgcctgtacggctgcatacgcacgttcaaaagccaaca 23001



 Score =  254 bits (128), Expect = 3e-64
 Identities = 155/164 (94%)
 Strand = Plus / Plus

                                                                         
Query: 142   aaaagcaatacaaagcaaaggctcgacacgggcctttagccatcaaatccatcgatcagt 201
             |||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 18841 aaaaacaatacaaagcaaaggctcgacacgggtctttagccatcaaatccattgatcagt 18900

                                                                         
Query: 202   tttattcgtgtcgctagttacgcaagttccgtcaagtagccggccaaagcaagaatcgcg 261
             ||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 18901 tttattcatgtcgctagttactcaagttccgtcaagtagccggccaaatcaagaatcgcg 18960

                                                         
Query: 262   taggcacgcctgtacagctgcatacgcacgttcaaaagccaaca 305
              |||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 18961 aaggcacgcctgtacggctgcatacgcacgttgaaaagccaaca 19004



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 70/79 (88%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                         
Query: 12    taggattaggaaagaaagccaa-ccgagtcctagtagtattaggattcctagtcctagtc 70
             ||||||||||||| ||||| || |||||||||| || ||||| ||| |||||||||| ||
Sbjct: 18746 taggattaggaaacaaagcaaaaccgagtcctactaatattatgatacctagtcctactc 18805

                                
Query: 71    tatttccatagtcccttgt 89
             |||||||||||||| ||||
Sbjct: 18806 tatttccatagtcctttgt 18824

to top

>ref|XM_483605.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3375

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 538  aattccctcagagaagtgaggccacacatcccatcaggcagcactttcagg 588
            |||| |||||| ||||||||||||  ||| ||||| ||||||| |||||||
Sbjct: 3350 aatttcctcagggaagtgaggccatccattccatcgggcagcaatttcagg 3300

to top

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                   
Query: 538      aattccctcagagaagtgaggccacacatcccatcaggcagcactttcagg 588
                |||| |||||| ||||||||||||  ||| ||||| ||||||| |||||||
Sbjct: 27199253 aatttcctcagggaagtgaggccatccattccatcgggcagcaatttcagg 27199303



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 391      gaggagagcaagtggaagtactccccaccttctctgcatcgtctt 435
                |||||||||||||  || ||||| ||||||||| |||| ||||||
Sbjct: 27199095 gaggagagcaagtcaaaatactcaccaccttctttgcaacgtctt 27199139



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ctattctctcaaagtattta 381
               ||||||||||||||||||||
Sbjct: 7017051 ctattctctcaaagtattta 7017070



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 362     ctattctctcaaagtattta 381
               ||||||||||||||||||||
Sbjct: 7004833 ctattctctcaaagtattta 7004852

to top

>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1521_G02
          Length = 117964

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                 
Query: 538    aattccctcagagaagtgaggccacacatcccatcaggcagcactttcagg 588
              |||| |||||| ||||||||||||  ||| ||||| ||||||| |||||||
Sbjct: 100286 aatttcctcagggaagtgaggccatccattccatcgggcagcaatttcagg 100336



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 391    gaggagagcaagtggaagtactccccaccttctctgcatcgtctt 435
              |||||||||||||  || ||||| ||||||||| |||| ||||||
Sbjct: 100128 gaggagagcaagtcaaaatactcaccaccttctttgcaacgtctt 100172

to top

>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0623F08
          Length = 154540

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 538   aattccctcagagaagtgaggccacacatcccatcaggcagcactttcagg 588
             |||| |||||| ||||||||||||  ||| ||||| ||||||| |||||||
Sbjct: 22456 aatttcctcagggaagtgaggccatccattccatcgggcagcaatttcagg 22506



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 391   gaggagagcaagtggaagtactccccaccttctctgcatcgtctt 435
             |||||||||||||  || ||||| ||||||||| |||| ||||||
Sbjct: 22298 gaggagagcaagtcaaaatactcaccaccttctttgcaacgtctt 22342

to top

>dbj|AK121394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130J02, full
            insert sequence
          Length = 3880

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 538  aattccctcagagaagtgaggccacacatcccatcaggcagcactttcagg 588
            |||| |||||| ||||||||||||  ||| ||||| ||||||| |||||||
Sbjct: 3437 aatttcctcagggaagtgaggccatccattccatcgggcagcaatttcagg 3387



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 391  gaggagagcaagtggaagtactccccaccttctctgcatcgtctt 435
            |||||||||||||  || ||||| ||||||||| |||| ||||||
Sbjct: 3595 gaggagagcaagtcaaaatactcaccaccttctttgcaacgtctt 3551

to top

>emb|AJ325463.1|HSA325463 Homo sapiens genomic sequence surrounding NotI site, clone HSJ41-954
          Length = 1348

 Score = 44.1 bits (22), Expect = 0.61
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 118  gttgattgtaacaccagaaaaa 139
            ||||||||||||||||||||||
Sbjct: 1084 gttgattgtaacaccagaaaaa 1105

to top

>gb|AC132106.4| Mus musculus BAC clone RP24-240D2 from chromosome 17, complete sequence
          Length = 169722

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 58    cctagtcctagtctatttccatagt 82
             |||||||||| ||||||||||||||
Sbjct: 93003 cctagtcctactctatttccatagt 92979

to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 634      ccaaggttcgaaggcagtgctacta 658
                |||||||||||||||||||| ||||
Sbjct: 12064644 ccaaggttcgaaggcagtgccacta 12064668



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 409      tactccccaccttctctgcatcgtcttt 436
                ||||| |||||||||||||| |||||||
Sbjct: 12064418 tactcgccaccttctctgcaccgtcttt 12064445

to top

>gb|AC004241.2| Homo sapiens 12 PAC RP3-197B17 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 136877

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 581    ctttcaggctcctgcagtcgc 601
              |||||||||||||||||||||
Sbjct: 132220 ctttcaggctcctgcagtcgc 132200

to top

>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0026D20
          Length = 130634

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 634   ccaaggttcgaaggcagtgctacta 658
             |||||||||||||||||||| ||||
Sbjct: 12949 ccaaggttcgaaggcagtgccacta 12973



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 409   tactccccaccttctctgcatcgtcttt 436
             ||||| |||||||||||||| |||||||
Sbjct: 12723 tactcgccaccttctctgcaccgtcttt 12750

to top

>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 105   acaccctaggggtgttgattg 125
             |||||||||||||||||||||
Sbjct: 18272 acaccctaggggtgttgattg 18292

to top

>gb|AC118547.41| Mus musculus strain C57BL/6J clone rp23-3g4 map 17, complete sequence
          Length = 234061

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 58     cctagtcctagtctatttccatagt 82
              |||||||||| ||||||||||||||
Sbjct: 214679 cctagtcctactctatttccatagt 214655

to top

>emb|AL589902.18| Mouse DNA sequence from clone RP23-108D12 on chromosome 2, complete
             sequence
          Length = 200325

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 608   agagactcctcagcttggcca 628
             |||||||||||||||||||||
Sbjct: 39955 agagactcctcagcttggcca 39975

to top

>gb|AC115871.8| Mus musculus chromosome 5, clone RP24-343A12, complete sequence
          Length = 175928

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 615    cctcagcttggccagtttcc 634
              ||||||||||||||||||||
Sbjct: 156511 cctcagcttggccagtttcc 156530

to top

>ref|XM_518016.1| PREDICTED: Pan troglodytes similar to leucyl-tRNA synthetase
            (LOC462167), mRNA
          Length = 3718

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 369  ctcaaagtatttacgtggaacaga 392
            |||||||||||||||| |||||||
Sbjct: 2811 ctcaaagtatttacgtagaacaga 2788

to top

>gb|U25997.1|HSU25997 Homo sapiens stanniocalcin precursor (STC) mRNA, complete cds
          Length = 3901

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 131  ccagaaaaacgaaaagcaatacaa 154
            ||||||||| ||||||||||||||
Sbjct: 2829 ccagaaaaatgaaaagcaatacaa 2852

to top

>ref|NM_003155.2| Homo sapiens stanniocalcin 1 (STC1), mRNA
          Length = 3897

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 131  ccagaaaaacgaaaagcaatacaa 154
            ||||||||| ||||||||||||||
Sbjct: 2828 ccagaaaaatgaaaagcaatacaa 2851

to top

>gb|AC159545.18| Mus musculus 6 BAC RP23-244E8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 172372

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   tccatcgatcagttttattc 208
             ||||||||||||||||||||
Sbjct: 59424 tccatcgatcagttttattc 59443

to top

>gb|AC102734.11| Mus musculus chromosome 6, clone RP24-222N4, complete sequence
          Length = 238453

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 525   accccaaatctccaattccc 544
             ||||||||||||||||||||
Sbjct: 89961 accccaaatctccaattccc 89980

to top

>gb|AC005039.1| Homo sapiens BAC clone RP11-512E16 from 7, complete sequence
          Length = 151316

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   gaaaagcaatacaaagcaaa 160
             ||||||||||||||||||||
Sbjct: 77770 gaaaagcaatacaaagcaaa 77751

to top

>gb|AC142315.1| Pan troglodytes BAC clone RP43-48P12 from 7, complete sequence
          Length = 178928

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    gaaaagcaatacaaagcaaa 160
              ||||||||||||||||||||
Sbjct: 104670 gaaaagcaatacaaagcaaa 104651

to top

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     gacaccctaggggtgttgat 123
               ||||||||||||||||||||
Sbjct: 3211864 gacaccctaggggtgttgat 3211883

to top

>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 499     tgcgggaattcctccatacc 518
               ||||||||||||||||||||
Sbjct: 1507843 tgcgggaattcctccatacc 1507862

to top

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 385     ggaacagaggagagcaagtggaag 408
               |||||||||||||||| |||||||
Sbjct: 2574663 ggaacagaggagagcacgtggaag 2574640

to top

>gb|AF165145.4| Homo sapiens chromosome 8 clone GS1-194o16 map 8p23, complete sequence
          Length = 131299

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 132   cagaaaaacgaaaagcaatacaaagcaaaggc 163
             |||||||  ||||||||| |||||||||||||
Sbjct: 32141 cagaaaagagaaaagcaaaacaaagcaaaggc 32110

to top

>gb|AF242179.1| Homo sapiens stanniocalcin 1 (STC1) gene, exons 1 through 4 and
             complete cds
          Length = 18216

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   ccagaaaaacgaaaagcaatacaa 154
             ||||||||| ||||||||||||||
Sbjct: 13844 ccagaaaaatgaaaagcaatacaa 13867

to top

>gb|AY228381.1| Phalanger orientalis 16S ribosomal RNA gene, complete sequence;
           mitochondrial gene for mitochondrial product
          Length = 1576

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 aaaagcaatacaaagcaaag 161
           ||||||||||||||||||||
Sbjct: 146 aaaagcaatacaaagcaaag 165

to top

>gb|AC153625.2| Mus musculus 6 BAC RP23-277O13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 175711

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    agacaccctaggggtgttga 122
              ||||||||||||||||||||
Sbjct: 174745 agacaccctaggggtgttga 174764

to top

>gb|AC159912.9| Mus musculus 6 BAC RP24-314B1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 178951

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   agacaccctaggggtgttga 122
             ||||||||||||||||||||
Sbjct: 32141 agacaccctaggggtgttga 32160

to top

>gb|AF356651.1|AF356651 Pichia pastoris Sec7p (SEC7) gene, complete cds
          Length = 7479

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 432 tctttgcaactccgggcaga 451
           ||||||||||||||||||||
Sbjct: 134 tctttgcaactccgggcaga 115

to top

>gb|AC114661.13| Mus musculus chromosome 5, clone RP24-166I7, complete sequence
          Length = 153768

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 615    cctcagcttggccagtttcc 634
              ||||||||||||||||||||
Sbjct: 116895 cctcagcttggccagtttcc 116876

to top

>gb|AC012119.8| Homo sapiens chromosome 8, clone RP11-175E9, complete sequence
          Length = 154898

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 131   ccagaaaaacgaaaagcaatacaa 154
             ||||||||| ||||||||||||||
Sbjct: 56282 ccagaaaaatgaaaagcaatacaa 56305

to top

>gb|AC124069.7| Homo sapiens chromosome 8, clone RP11-326L2, complete sequence
          Length = 174025

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 132   cagaaaaacgaaaagcaatacaaagcaaaggc 163
             |||||||  ||||||||| |||||||||||||
Sbjct: 64443 cagaaaagagaaaagcaaaacaaagcaaaggc 64474

to top

>emb|BX855594.2| Mouse DNA sequence from clone RP24-322M2 on chromosome 4, complete
             sequence
          Length = 81134

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    attcctagtcctagtctatt 74
             ||||||||||||||||||||
Sbjct: 38480 attcctagtcctagtctatt 38499

to top

>dbj|AP006615.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1165C09
          Length = 202985

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    ctattctctcaaagtattta 381
              ||||||||||||||||||||
Sbjct: 135099 ctattctctcaaagtattta 135118



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    ctattctctcaaagtattta 381
              ||||||||||||||||||||
Sbjct: 122881 ctattctctcaaagtattta 122900

to top

>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0674B07
          Length = 192191

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ctattctctcaaagtattta 381
             ||||||||||||||||||||
Sbjct: 62537 ctattctctcaaagtattta 62556



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 362   ctattctctcaaagtattta 381
             ||||||||||||||||||||
Sbjct: 50319 ctattctctcaaagtattta 50338

to top

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 468     ttcgagggctggcaaccgct 487
               ||||||||||||||||||||
Sbjct: 5778949 ttcgagggctggcaaccgct 5778968

to top

>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   caccctaggggtgttgattg 125
             ||||||||||||||||||||
Sbjct: 20969 caccctaggggtgttgattg 20988

to top

>dbj|AP006249.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-383B10, complete
             sequence
          Length = 195290

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 132   cagaaaaacgaaaagcaatacaaagcaaaggc 163
             |||||||  ||||||||| |||||||||||||
Sbjct: 30476 cagaaaagagaaaagcaaaacaaagcaaaggc 30507

to top

>gb|AC153381.2| Mus musculus 6 BAC RP23-397L23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196902

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   tccatcgatcagttttattc 208
             ||||||||||||||||||||
Sbjct: 61673 tccatcgatcagttttattc 61654

to top

>dbj|AB020864.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 7/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 132   cagaaaaacgaaaagcaatacaaagcaaaggc 163
             |||||||  ||||||||| |||||||||||||
Sbjct: 31381 cagaaaagagaaaagcaaaacaaagcaaaggc 31412


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,225,564
Number of Sequences: 3902068
Number of extensions: 5225564
Number of successful extensions: 91151
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90892
Number of HSP's gapped (non-prelim): 244
length of query: 694
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 671
effective length of database: 17,143,297,704
effective search space: 11503152759384
effective search space used: 11503152759384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result