ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd18b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY162186.1| Triticum monococcum extracellular invertase (exin... 381 e-102
2ref|XM_450319.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
3gb|AY575555.1| Oryza sativa (indica cultivar-group) cultivar IR6... 88 4e-14
4gb|AY578164.1| Oryza sativa (japonica cultivar-group) cell-wall ... 88 4e-14
5dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
6dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
7dbj|AK069080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 4e-14
8gb|AF155121.1|AF155121 Oryza sativa subsp. indica apoplastic inv... 88 4e-14
9gb|AY578165.1| Oryza sativa (japonica cultivar-group) cell-wall ... 80 9e-12
10ref|XM_474246.1| Oryza sativa (japonica cultivar-group), predic... 72 2e-09
11emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4,... 72 2e-09
12gb|AY575553.1| Oryza sativa (indica cultivar-group) cultivar IR6... 72 2e-09
13gb|AY578162.1| Oryza sativa (japonica cultivar-group) cell-wall ... 72 2e-09
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
15gb|AF043347.1|AF043347 Zea mays cell wall invertase (incw4) gene... 56 1e-04
16gb|AY110858.1| Zea mays CL1272_1 mRNA sequence 56 1e-04
17ref|XM_474245.1| Oryza sativa (japonica cultivar-group), predic... 48 0.032
18gb|AY575554.1| Oryza sativa (indica cultivar-group) cultivar IR6... 48 0.032
19gb|AY578163.1| Oryza sativa (japonica cultivar-group) cell-wall ... 48 0.032
20gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, comp... 44 0.49
21gb|AC158345.8| Mus musculus chromosome 7, clone RP23-271M19, com... 44 0.49
22gb|AE005048.1| Halobacterium sp. NRC-1 section 79 of 170 of the ... 44 0.49
23gb|AF043729.1|AF043729 Zea mays cell wall invertase Incw4 mRNA, ... 44 0.49
24gb|AC147153.2| Mus musculus chromosome y clone RP24-373C15, comp... 42 2.0
25ref|XM_754164.1| Ustilago maydis 521 hypothetical protein (UM031... 42 2.0
26gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 geno... 42 2.0
27gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, co... 42 2.0
28emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 42 2.0
29emb|AL645544.16| Mouse DNA sequence from clone RP23-327M13 on ch... 42 2.0
30emb|AL645946.6| Mouse DNA sequence from clone DN-276O13 on chrom... 42 2.0
31gb|AC161575.3| Mus musculus chromosome 15, clone RP24-264K6, com... 42 2.0
32gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRN... 42 2.0
33gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14... 42 2.0
34gb|AF165181.1|AF165181 Zea mays cultivar miniature 1-1 cell wall... 42 2.0
35gb|AF165180.1|AF165180 Zea mays cultivar mn1-89 cell wall invert... 42 2.0
36gb|AF165179.1|AF165179 Zea mays cultivar W22 inbred cell wall in... 42 2.0
37dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransf... 42 2.0
38gb|AF050631.1|AF050631 Zea mays invertase mRNA, complete cds 42 2.0
39gb|AY110035.1| Zea mays CL1139_1 mRNA sequence 42 2.0
40ref|NM_129125.1| Arabidopsis thaliana DNA binding / transcriptio... 40 7.7
41gb|AC162379.2| Mus musculus BAC clone RP23-132A15 from chromosom... 40 7.7
42gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.7
43gb|AY560845.1| Arabidopsis thaliana putative AP2/EREBP transcrip... 40 7.7
44gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, com... 40 7.7
45gb|DQ446600.1| Arabidopsis thaliana clone pENTR221-At2g35700 AP2... 40 7.7
46emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chr... 40 7.7
47gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.7
48gb|AC134380.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
49emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.7
50emb|BX571869.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 7.7
51emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.7
52gb|AC069256.15| Homo sapiens 3 BAC RP11-445G6 (Roswell Park Canc... 40 7.7
53gb|AC092944.14| Homo sapiens 3 BAC RP11-550I24 (Roswell Park Can... 40 7.7
54dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.7
55gb|AY028431.1| Burkholderia cepacia genomovar III putative type ... 40 7.7
56gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 ma... 40 7.7
57gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence 40 7.7
58gb|AC148700.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.7
59gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex B... 40 7.7
60gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.7
61emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in ... 40 7.7 
>gb|AY162186.1| Triticum monococcum extracellular invertase (exin1) mRNA, complete
            cds
          Length = 2279

 Score =  381 bits (192), Expect = e-102
 Identities = 219/228 (96%)
 Strand = Plus / Minus

                                                                        
Query: 339  ccatccatccaccgagcgaaaacccagctcccgaatcctaataggcttgagctccgctca 398
            |||||| ||||||| ||||||||||||||||  ||||||||||||||||||| | |||||
Sbjct: 1860 ccatccgtccaccgtgcgaaaacccagctccgaaatcctaataggcttgagccctgctca 1801

                                                                        
Query: 399  ccgagctcgccgcgatcagcccgtcggggagcacgttcacggtcgccgtcgccatctccc 458
            |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||
Sbjct: 1800 ccgagctcgccgcgatcagctcgtcggggaggacgttcacggtcgccgtggccatctccc 1741

                                                                        
Query: 459  acgcgtcgaggctggacaccttgacggcgccggtgccgttgttgaacacgtacaggtggc 518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1740 acgcgtcgaggctggacaccttgacggcgccggtgccgttgttgaacacgtacaggtggc 1681

                                                            
Query: 519  tgttgccgttcacgacgtggtccgggtacaccctcgccgtgatgcacg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1680 tgttgccgttcacgacgtggtccgggtacaccctcgccgtgatgcacg 1633



 Score =  220 bits (111), Expect = 4e-54
 Identities = 159/176 (90%), Gaps = 8/176 (4%)
 Strand = Plus / Minus

                                                                        
Query: 182  aacacctaaacacaaatattcctacaatctttttcctttgcagcatcctagaatcctcct 241
            |||||||| |||||||| ||| || |||||||||||||||||||||||||||||||| ||
Sbjct: 2037 aacacctagacacaaatcttcttagaatctttttcctttgcagcatcctagaatccttct 1978

                                                                        
Query: 242  tctgtgctgttctggcaaac--------aatgagggagcctccatttgtacacctgagcc 293
            |||||||||||| |  ||||        ||||||||||||||||||||||||||||||||
Sbjct: 1977 tctgtgctgttccgagaaacaatgactcaatgagggagcctccatttgtacacctgagcc 1918

                                                                    
Query: 294  acaattgggcaggcaaatccaatcggccgtagaaattcacaatggccatccatcca 349
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1917 acaattgggcaggcaaatccaatcggccgtggaaattcacaatggccatccatcca 1862



 Score =  113 bits (57), Expect = 6e-22
 Identities = 101/113 (89%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                        
Query: 27   tattattttgtacaactcaacggatatcatacttttacatgacacccgttttcaccttgg 86
            ||||||||| ||||||||||| |||||||||| |||||| ||| ||||||||||||||||
Sbjct: 2229 tattattttttacaactcaactgatatcatacatttacaggacgcccgttttcaccttgg 2170

                                                                 
Query: 87   aaatacactc-taaactgatgcc-aacgcccatcatgcagggcatgcgtgcta 137
            |||||||||| |||  ||||||| ||  |||| ||||||||||||||||||||
Sbjct: 2169 aaatacactcttaatttgatgccaaatacccaacatgcagggcatgcgtgcta 2117
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>ref|XM_450319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2098

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 431  acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
            ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 1843 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 1784

                                                                        
Query: 491  gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
             | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 1783 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 1724

                            
Query: 551  ctcgccgtgatgcacg 566
            | ||||||||||||||
Sbjct: 1723 cgcgccgtgatgcacg 1708
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>gb|AY575555.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall
           invertase 8 mRNA, partial cds
          Length = 348

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                       
Query: 431 acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
           ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 217 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 158

                                                                       
Query: 491 gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
            | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 157 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 98

                           
Query: 551 ctcgccgtgatgcacg 566
           | ||||||||||||||
Sbjct: 97  cgcgccgtgatgcacg 82
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>gb|AY578164.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 7 mRNA,
            complete cds
          Length = 2076

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 431  acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
            ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 1821 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 1762

                                                                        
Query: 491  gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
             | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 1761 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 1702

                            
Query: 551  ctcgccgtgatgcacg 566
            | ||||||||||||||
Sbjct: 1701 cgcgccgtgatgcacg 1686
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                           
Query: 431     acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
               ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 4116475 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 4116416

                                                                           
Query: 491     gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
                | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 4116415 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 4116356

                               
Query: 551     ctcgccgtgatgcacg 566
               | ||||||||||||||
Sbjct: 4116355 cgcgccgtgatgcacg 4116340



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 112/136 (82%)
 Strand = Plus / Minus

                                                                           
Query: 431     acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
               ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| ||| || ||
Sbjct: 4144369 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacgtcgtcg 4144310

                                                                           
Query: 491     gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
                | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 4144309 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 4144250

                               
Query: 551     ctcgccgtgatgcacg 566
               | ||||||||||||||
Sbjct: 4144249 cgcgccgtgatgcacg 4144234
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>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBb0066C12
          Length = 168874

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                         
Query: 431   acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
             ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 99956 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 99897

                                                                         
Query: 491   gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
              | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 99896 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 99837

                             
Query: 551   ctcgccgtgatgcacg 566
             | ||||||||||||||
Sbjct: 99836 cgcgccgtgatgcacg 99821



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 112/136 (82%)
 Strand = Plus / Minus

                                                                          
Query: 431    acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
              ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| ||| || ||
Sbjct: 127850 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacgtcgtcg 127791

                                                                          
Query: 491    gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
               | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 127790 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 127731

                              
Query: 551    ctcgccgtgatgcacg 566
              | ||||||||||||||
Sbjct: 127730 cgcgccgtgatgcacg 127715
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>dbj|AK069080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I08, full
            insert sequence
          Length = 2101

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 431  acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
            ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 1846 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacggcgtcg 1787

                                                                        
Query: 491  gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
             | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 1786 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 1727

                            
Query: 551  ctcgccgtgatgcacg 566
            | ||||||||||||||
Sbjct: 1726 cgcgccgtgatgcacg 1711
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>gb|AF155121.1|AF155121 Oryza sativa subsp. indica apoplastic invertase (INV1) gene, complete
            cds
          Length = 7783

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 431  acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
            ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| |||||| ||
Sbjct: 6930 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttcacggcgtcg 6871

                                                                        
Query: 491  gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
             | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 6870 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 6811

                            
Query: 551  ctcgccgtgatgcacg 566
            | ||||||||||||||
Sbjct: 6810 cgcgccgtgatgcacg 6795
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>gb|AY578165.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 8
            pseudogene mRNA, complete sequence
          Length = 1353

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 112/136 (82%)
 Strand = Plus / Minus

                                                                        
Query: 431  acgttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccg 490
            ||||| ||||||||||||||||  |||||||| || ||  ||| |||||| ||| || ||
Sbjct: 1283 acgttgacggtcgccgtcgccaggtcccacgcctccagcttggccaccttaacgtcgtcg 1224

                                                                        
Query: 491  gtgccgttgttgaacacgtacaggtggctgttgccgttcacgacgtggtccgggtacacc 550
             | |||||||||||||||||||  |||||| |||   || | ||||| |||||||| |||
Sbjct: 1223 ctcccgttgttgaacacgtacaaatggctgctgctcgtcgccacgtgctccgggtaaacc 1164

                            
Query: 551  ctcgccgtgatgcacg 566
            | ||||||||||||||
Sbjct: 1163 cgcgccgtgatgcacg 1148
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>ref|XM_474246.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1545

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                        
Query: 433  gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 492
            ||||||||||||||| |||||||||||||| |||||  ||||||| || || | ||| | 
Sbjct: 1509 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctga 1450

                                    
Query: 493  gccgttgttgaacacgtacaggtg 516
             || ||||||||||||||||||||
Sbjct: 1449 cccattgttgaacacgtacaggtg 1426
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>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24,
             complete sequence
          Length = 146168

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                         
Query: 433   gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 492
             ||||||||||||||| |||||||||||||| |||||  ||||||| || || | ||| | 
Sbjct: 28897 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctga 28956

                                     
Query: 493   gccgttgttgaacacgtacaggtg 516
              || ||||||||||||||||||||
Sbjct: 28957 cccattgttgaacacgtacaggtg 28980



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 497   ttgttgaacacgtacaggtggctg 520
             ||||||||||||||||||||||||
Sbjct: 25825 ttgttgaacacgtacaggtggctg 25848
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>gb|AY575553.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall
           invertase 6-like mRNA, partial sequence
          Length = 506

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                       
Query: 433 gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 492
           ||||||||||||||| |||||||||||||| |||||  ||||||| || || | ||| | 
Sbjct: 436 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctga 377

                                   
Query: 493 gccgttgttgaacacgtacaggtg 516
            || ||||||||||||||||||||
Sbjct: 376 cccattgttgaacacgtacaggtg 353
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>gb|AY578162.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 5 mRNA,
            complete cds
          Length = 1731

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Minus

                                                                        
Query: 433  gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 492
            ||||||||||||||| |||||||||||||| |||||  ||||||| || || | ||| | 
Sbjct: 1545 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctga 1486

                                    
Query: 493  gccgttgttgaacacgtacaggtg 516
             || ||||||||||||||||||||
Sbjct: 1485 cccattgttgaacacgtacaggtg 1462
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                            
Query: 433      gttcacggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggt 492
                ||||||||||||||| |||||||||||||| |||||  ||||||| || || | ||| | 
Sbjct: 33978000 gttcacggtcgccgtggccatctcccacgcctcgagcttggacacattcaccgtgcctga 33978059

                                        
Query: 493      gccgttgttgaacacgtacaggtg 516
                 || ||||||||||||||||||||
Sbjct: 33978060 cccattgttgaacacgtacaggtg 33978083



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 497      ttgttgaacacgtacaggtggctg 520
                ||||||||||||||||||||||||
Sbjct: 33974928 ttgttgaacacgtacaggtggctg 33974951
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>gb|AF043347.1|AF043347 Zea mays cell wall invertase (incw4) gene, complete cds
          Length = 5535

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                        
Query: 437  acggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggtgccg 496
            |||||||||| ||| | |||||| || |||||  |||||||||  || | ||| ||||| 
Sbjct: 5163 acggtcgccgccgcgagctcccatgcctcgagcttggacacctccaccgtgcctgtgcca 5104

                                        
Query: 497  ttgttgaacacgtacaggtggctgttgc 524
            |||||||||||| ||| |||||||||||
Sbjct: 5103 ttgttgaacacgaacatgtggctgttgc 5076
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>gb|AY110858.1| Zea mays CL1272_1 mRNA sequence
          Length = 2233

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                        
Query: 437  acggtcgccgtcgccatctcccacgcgtcgaggctggacaccttgacggcgccggtgccg 496
            |||||||||| ||| | |||||| || |||||  |||||||||  || | ||| ||||| 
Sbjct: 2010 acggtcgccgccgcgagctcccatgcctcgagcttggacacctccaccgtgcctgtgcca 1951

                                        
Query: 497  ttgttgaacacgtacaggtggctgttgc 524
            |||||||||||| ||| |||||||||||
Sbjct: 1950 ttgttgaacacgaacatgtggctgttgc 1923
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>ref|XM_474245.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1782

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 497  ttgttgaacacgtacaggtggctg 520
            ||||||||||||||||||||||||
Sbjct: 1658 ttgttgaacacgtacaggtggctg 1635
to top
>gb|AY575554.1| Oryza sativa (indica cultivar-group) cultivar IR64 cell wall
           invertase 7-like mRNA, partial sequence
          Length = 397

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 497 ttgttgaacacgtacaggtggctg 520
           ||||||||||||||||||||||||
Sbjct: 271 ttgttgaacacgtacaggtggctg 248
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>gb|AY578163.1| Oryza sativa (japonica cultivar-group) cell-wall invertase 6 mRNA,
            complete cds
          Length = 1926

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 497  ttgttgaacacgtacaggtggctg 520
            ||||||||||||||||||||||||
Sbjct: 1733 ttgttgaacacgtacaggtggctg 1710
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>gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, complete sequence
          Length = 215675

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 66     tgacacccgttttcaccttggaaata 91
              |||||||| |||||||||||||||||
Sbjct: 191026 tgacaccccttttcaccttggaaata 191051
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>gb|AC158345.8| Mus musculus chromosome 7, clone RP23-271M19, complete sequence
          Length = 188354

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 66     tgacacccgttttcaccttggaaata 91
              |||||||| |||||||||||||||||
Sbjct: 130930 tgacaccccttttcaccttggaaata 130905
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>gb|AE005048.1| Halobacterium sp. NRC-1 section 79 of 170 of the complete genome
          Length = 10225

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 393  cgctcaccgagctcgccgcgatcagc 418
            ||||| ||||||||||||||||||||
Sbjct: 1002 cgctcgccgagctcgccgcgatcagc 1027
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>gb|AF043729.1|AF043729 Zea mays cell wall invertase Incw4 mRNA, partial cds
          Length = 381

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 491 gtgccgttgttgaacacgtacaggtggctgttgc 524
           ||||| |||||||||||| ||| |||||||||||
Sbjct: 368 gtgccattgttgaacacgaacatgtggctgttgc 335
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>gb|AC147153.2| Mus musculus chromosome y clone RP24-373C15, complete sequence
          Length = 147194

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    atcaaaaccttccaacaccta 189
              |||||||||||||||||||||
Sbjct: 138903 atcaaaaccttccaacaccta 138923
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>ref|XM_754164.1| Ustilago maydis 521 hypothetical protein (UM03110.1) partial mRNA
          Length = 1521

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 447 tcgccatctcccacgcgtcgaggct 471
           ||||||||||||||| |||||||||
Sbjct: 136 tcgccatctcccacgggtcgaggct 160
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>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
             sequence
          Length = 100239

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    tatagatttgaatagtattattttg 36
             |||| ||||||||||||||||||||
Sbjct: 93375 tatacatttgaatagtattattttg 93351
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>gb|AC139209.10| Mus musculus chromosome 15, clone RP23-153G2, complete sequence
          Length = 211178

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    tccaacacctaaacacaaata 199
              |||||||||||||||||||||
Sbjct: 109259 tccaacacctaaacacaaata 109239
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 409    cgcgatcagcccgtcggggag 429
              |||||||||||||||||||||
Sbjct: 153431 cgcgatcagcccgtcggggag 153411
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>emb|AL645544.16| Mouse DNA sequence from clone RP23-327M13 on chromosome 1 Contains the
              gene for an ortholog of human amyotrophic lateral sclerosis
              2 (juvenile) chromosome region, candidate 19 (ALS2CR19),
              the 3' end of a novel gene and two CpG islands, complete
              sequence
          Length = 216046

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    atcaaaaccttccaacaccta 189
              |||||||||||||||||||||
Sbjct: 201195 atcaaaaccttccaacaccta 201215
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>emb|AL645946.6| Mouse DNA sequence from clone DN-276O13 on chromosome 1 Contains part of
              the ortholog of human amyotrophic lateral sclerosis 2
              (juvenile) chromosome region candidate 19 ALS2CR19
              (2810455B10RIK 6030439I24RIK 2010002N16RIK), and the 3' end
              of a novel gene (4930448K12RIK 4930412B09RIK), complete
              sequence
          Length = 140936

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    atcaaaaccttccaacaccta 189
              |||||||||||||||||||||
Sbjct: 128291 atcaaaaccttccaacaccta 128311
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>gb|AC161575.3| Mus musculus chromosome 15, clone RP24-264K6, complete sequence
          Length = 164213

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    tccaacacctaaacacaaata 199
              |||||||||||||||||||||
Sbjct: 109329 tccaacacctaaacacaaata 109309
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>gb|AF494041.1| Lolium perenne fructan 6-fructosyltransferase mRNA, complete cds
          Length = 2279

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 484  ggcgccggtgccgttgttgaacacgtaca 512
            |||||||||| |||||||||||| |||||
Sbjct: 1871 ggcgccggtggcgttgttgaacaggtaca 1843
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>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete
             sequence
          Length = 121668

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    tatagatttgaatagtattattttg 36
             |||| ||||||||||||||||||||
Sbjct: 18736 tatacatttgaatagtattattttg 18712
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>gb|AF165181.1|AF165181 Zea mays cultivar miniature 1-1 cell wall invertase (Incw) mRNA,
            partial cds
          Length = 1754

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 53/61 (86%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                        
Query: 451  catctcccacgcgtcgaggctggacaccttgacg-gcgccggtgccgttgttgaacacgt 509
            |||||||||||||  ||| | ||||||||||||| |||||  | ||||||||||||||||
Sbjct: 1725 catctcccacgcggtgagacgggacaccttgacgtgcgcc-ctcccgttgttgaacacgt 1667

             
Query: 510  a 510
            |
Sbjct: 1666 a 1666
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>gb|AF165180.1|AF165180 Zea mays cultivar mn1-89 cell wall invertase 2 (Incw2) mRNA, complete
            cds
          Length = 2027

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 53/61 (86%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                        
Query: 451  catctcccacgcgtcgaggctggacaccttgacg-gcgccggtgccgttgttgaacacgt 509
            |||||||||||||  ||| | ||||||||||||| |||||  | ||||||||||||||||
Sbjct: 1788 catctcccacgcggtgagacgggacaccttgacgtgcgcc-ctcccgttgttgaacacgt 1730

             
Query: 510  a 510
            |
Sbjct: 1729 a 1729
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>gb|AF165179.1|AF165179 Zea mays cultivar W22 inbred cell wall invertase 2 (Incw2) mRNA,
            complete cds
          Length = 2027

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 53/61 (86%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                        
Query: 451  catctcccacgcgtcgaggctggacaccttgacg-gcgccggtgccgttgttgaacacgt 509
            |||||||||||||  ||| | ||||||||||||| |||||  | ||||||||||||||||
Sbjct: 1788 catctcccacgcggtgagacgggacaccttgacgtgcgcc-ctcccgttgttgaacacgt 1730

             
Query: 510  a 510
            |
Sbjct: 1729 a 1729
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>dbj|AB186920.1| Lolium perenne mRNA for putative fructosyltransferase1, complete cds
          Length = 2268

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 484  ggcgccggtgccgttgttgaacacgtaca 512
            |||||||||| |||||||||||| |||||
Sbjct: 1865 ggcgccggtggcgttgttgaacaggtaca 1837
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>gb|AF050631.1|AF050631 Zea mays invertase mRNA, complete cds
          Length = 2036

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 53/61 (86%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                        
Query: 451  catctcccacgcgtcgaggctggacaccttgacg-gcgccggtgccgttgttgaacacgt 509
            |||||||||||||  ||| | ||||||||||||| |||||  | ||||||||||||||||
Sbjct: 1803 catctcccacgcggtgagacgggacaccttgacgtgcgcc-ctcccgttgttgaacacgt 1745

             
Query: 510  a 510
            |
Sbjct: 1744 a 1744
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>gb|AY110035.1| Zea mays CL1139_1 mRNA sequence
          Length = 2025

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 53/61 (86%), Gaps = 2/61 (3%)
 Strand = Plus / Minus

                                                                        
Query: 451  catctcccacgcgtcgaggctggacaccttgacg-gcgccggtgccgttgttgaacacgt 509
            |||||||||||||  ||| | ||||||||||||| |||||  | ||||||||||||||||
Sbjct: 1805 catctcccacgcggtgagacgggacaccttgacgtgcgcc-ctcccgttgttgaacacgt 1747

             
Query: 510  a 510
            |
Sbjct: 1746 a 1746
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>ref|NM_129125.1| Arabidopsis thaliana DNA binding / transcription factor AT2G35700
           mRNA, complete cds
          Length = 585

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 tcgccgtcgccatctcccac 460
           ||||||||||||||||||||
Sbjct: 415 tcgccgtcgccatctcccac 434
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>gb|AC162379.2| Mus musculus BAC clone RP23-132A15 from chromosome 12, complete sequence
          Length = 238126

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     gaaatacactctaaactgat 105
              ||||||||||||||||||||
Sbjct: 216887 gaaatacactctaaactgat 216906
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 483     cggcgccggtgccgttgttg 502
               ||||||||||||||||||||
Sbjct: 3924131 cggcgccggtgccgttgttg 3924112
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>gb|AY560845.1| Arabidopsis thaliana putative AP2/EREBP transcription factor
           (At2g35700) mRNA, complete cds
          Length = 585

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 tcgccgtcgccatctcccac 460
           ||||||||||||||||||||
Sbjct: 415 tcgccgtcgccatctcccac 434
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>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     gaaatacactctaaactgat 105
              ||||||||||||||||||||
Sbjct: 185195 gaaatacactctaaactgat 185176
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>gb|DQ446600.1| Arabidopsis thaliana clone pENTR221-At2g35700 AP2 domain-containing
           transcription factor (At2g35700) mRNA, complete cds
          Length = 585

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 441 tcgccgtcgccatctcccac 460
           ||||||||||||||||||||
Sbjct: 415 tcgccgtcgccatctcccac 434
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>emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chromosome 6, complete
             sequence
          Length = 119389

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   aaacacaaatattcctacaa 208
             ||||||||||||||||||||
Sbjct: 66420 aaacacaaatattcctacaa 66439
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 406    cgccgcgatcagcccgtcgg 425
              ||||||||||||||||||||
Sbjct: 351275 cgccgcgatcagcccgtcgg 351256
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>gb|AC134380.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNPb106I21, complete sequence
          Length = 6207

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 439  ggtcgccgtcgccatctccc 458
            ||||||||||||||||||||
Sbjct: 2271 ggtcgccgtcgccatctccc 2252
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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    cggcgccggtgccgttgttg 502
              ||||||||||||||||||||
Sbjct: 113122 cggcgccggtgccgttgttg 113103
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>emb|BX571869.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             11/17
          Length = 349284

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aatatataccttatagattt 20
             ||||||||||||||||||||
Sbjct: 66943 aatatataccttatagattt 66924
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>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14
          Length = 316050

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    cggcgccggtgccgttgttg 502
              ||||||||||||||||||||
Sbjct: 124849 cggcgccggtgccgttgttg 124830
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>gb|AC069256.15| Homo sapiens 3 BAC RP11-445G6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 149986

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 222    cagcatcctagaatcctccttctg 245
              ||||||| ||||||||||||||||
Sbjct: 115525 cagcatcgtagaatcctccttctg 115548
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>gb|AC092944.14| Homo sapiens 3 BAC RP11-550I24 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184688

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 222   cagcatcctagaatcctccttctg 245
             ||||||| ||||||||||||||||
Sbjct: 38014 cagcatcgtagaatcctccttctg 37991
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 475     caccttgacggcgccggtgccgttgttg 502
               |||||||| ||||||||||| |||||||
Sbjct: 1059373 caccttgatggcgccggtgcggttgttg 1059346
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>gb|AY028431.1| Burkholderia cepacia genomovar III putative type III secretion gene
             cluster, complete sequence
          Length = 34600

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   ttgacggcgccggtgccgtt 498
             ||||||||||||||||||||
Sbjct: 29045 ttgacggcgccggtgccgtt 29026
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>gb|AC006068.4| Arabidopsis thaliana chromosome 2 clone T20F21 map ve016, complete
             sequence
          Length = 107436

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 441   tcgccgtcgccatctcccac 460
             ||||||||||||||||||||
Sbjct: 38518 tcgccgtcgccatctcccac 38499
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>gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence
          Length = 160981

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    attattttgtacaactcaac 47
             ||||||||||||||||||||
Sbjct: 47832 attattttgtacaactcaac 47813
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>gb|AC148700.1| Macaca mulatta Major Histocompatibility Complex BAC MMU281E18, complete
              sequence
          Length = 188725

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 161    ttgacagtatcaaaaccttccaac 184
              ||||| ||||||||||||||||||
Sbjct: 123024 ttgactgtatcaaaaccttccaac 123001
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>gb|AC148661.1| Macaca mulatta Major Histocompatibility Complex BAC MMU007H18, complete
              sequence
          Length = 215614

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 161    ttgacagtatcaaaaccttccaac 184
              ||||| ||||||||||||||||||
Sbjct: 181159 ttgactgtatcaaaaccttccaac 181136
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 475     caccttgacggcgccggtgccgttgttg 502
               |||||||| ||||||||||| |||||||
Sbjct: 1092898 caccttgatggcgccggtgcggttgttg 1092871
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>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8,
             complete sequence
          Length = 217745

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 180   ccaacacctaaacacaaata 199
             ||||||||||||||||||||
Sbjct: 10136 ccaacacctaaacacaaata 10155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,685,234
Number of Sequences: 3902068
Number of extensions: 4685234
Number of successful extensions: 84817
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 84395
Number of HSP's gapped (non-prelim): 406
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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