>DEFM_HUMAN (Q9HBH1) Peptide deformylase, mitochondrial precursor (EC 3.5.1.88)|
           (PDF) (Polypeptide deformylase)
          Length = 243

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
 Frame = -2

Query: 411 APDQRAGGGAPGLHRLQEALVRGGRRHRC-PVDSPQRAAGRR--GAYACDDLCRSVERSS 241
           AP +RA  G P L RL + LV+  RR RC  + +PQ    R+       + LCR      
Sbjct: 80  APVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALELPEALCRECPPRQ 139

Query: 240 EAIRAAMPWMCSTLLFP 190
            A+R   P+     + P
Sbjct: 140 RALRQMEPFPLRVFVNP 156

>DAB_DROME (P98081) Protein disabled|
          Length = 2224

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 19/50 (38%), Positives = 26/50 (52%)
 Frame = -3

Query: 440 VHRSIKNNDQPPTSEQVAALQAFIDSRKR*SGAAAGTDAPSIPLSERRGG 291
           +  S  N  QPPTS +   L + + +R+     A+  DAP IPL  RR G
Sbjct: 808 IRPSPANTTQPPTSGRYEYLNSNVTARR----TASSVDAPPIPLPSRRVG 853

>SNUT1_RAT (Q5XIW8) U4/U6.U5 tri-snRNP-associated protein 1 (Squamous cell|
           carcinoma antigen recognized by T-cells 1) (SART-1)
           (rSART-1)
          Length = 806

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 25/85 (29%), Positives = 33/85 (38%)
 Frame = -2

Query: 531 EDEAAGQTXXXXXXXXXXXXAGVLWGDDVRRAPLHQEQRPAPDQRAGGGAPGLHRLQEAL 352
           E EAAG T                 G    + P H+E +    + +GGG+ G        
Sbjct: 10  EKEAAGTTAAAGT------------GGTTEQPPRHREHKKHKHRSSGGGSSG-------- 49

Query: 351 VRGGRRHRCPVDSPQRAAGRRGAYA 277
             G RR R      +R +GRRGA A
Sbjct: 50  --GERRKRSRERGAERGSGRRGAEA 72

>SNUT1_MOUSE (Q9Z315) U4/U6.U5 tri-snRNP-associated protein 1 (Squamous cell|
           carcinoma antigen recognized by T-cells 1) (SART-1)
           (mSART-1) (Hypoxia-associated factor)
          Length = 806

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 25/85 (29%), Positives = 33/85 (38%)
 Frame = -2

Query: 531 EDEAAGQTXXXXXXXXXXXXAGVLWGDDVRRAPLHQEQRPAPDQRAGGGAPGLHRLQEAL 352
           E EAAG T                 G    + P H+E +    + +GGG+ G        
Sbjct: 10  EKEAAGTTAAAGT------------GGTTEQPPRHREHKKHKHRSSGGGSSG-------- 49

Query: 351 VRGGRRHRCPVDSPQRAAGRRGAYA 277
             G RR R      +R +GRRGA A
Sbjct: 50  --GERRKRSRERGSERGSGRRGAEA 72

>HSBH1_SOYBN (P46608) Homeobox protein SBH1|
          Length = 379

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 104 QHGRNGICITWLYGLYTYIHSTHHPVPPLGNNNV 205
           ++   G+C   +  L T  H+ HHP+ P  NNNV
Sbjct: 19  ENNSGGLCPMTMMPLVTSHHAGHHPINPSNNNNV 52

>SNUT1_HUMAN (O43290) U4/U6.U5 tri-snRNP-associated protein 1 (U4/U6.U5|
           tri-snRNP-associated 110 kDa protein) (Squamous cell
           carcinoma antigen recognized by T cells 1) (SART-1)
           (hSART-1) (hSnu66)
          Length = 800

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 24/85 (28%), Positives = 32/85 (37%)
 Frame = -2

Query: 531 EDEAAGQTXXXXXXXXXXXXAGVLWGDDVRRAPLHQEQRPAPDQRAGGGAPGLHRLQEAL 352
           E EAAG T                 G    + P H+E +    +  G G  G  R + + 
Sbjct: 10  EKEAAGTTAAAGT------------GGATEQPPRHREHKKHKHRSGGSGGSGGERRKRSR 57

Query: 351 VRGGRRHRCPVDSPQRAAGRRGAYA 277
            RGG          +R +GRRGA A
Sbjct: 58  ERGG----------ERGSGRRGAEA 72

>FA8A1_HUMAN (Q9UBU6) Protein FAM8A1 (Autosomal highly conserved protein)|
          Length = 413

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +1

Query: 205 RTHPWHGRSYCFRRTLHRSTEIITSICTAPPRRSLRGIDGASVPAAA 345
           + H W  +SYC   T H       + C+  P        GA+VP AA
Sbjct: 116 QVHEWLWQSYCGYLTWHSGLAAFPAYCSPQPSPQSFPSGGAAVPQAA 162

>LZTS2_MOUSE (Q91YU6) Leucine zipper putative tumor suppressor 2|
          Length = 671

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -2

Query: 414 PAPDQRAGGGAPGLHRLQEALVRGG---RRHRCPVDSPQRAA-GRRGAYACDD 268
           PAP +  G   P   R Q+ L+RGG   +   CP   P++A  G    Y  +D
Sbjct: 42  PAPQRHHGVPGPTFFRQQDGLLRGGYEAQEPLCPAVPPRKAVPGNSFTYVNED 94

>MYOB_DICDI (P34092) Myosin IB heavy chain|
          Length = 1111

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -2

Query: 426  QEQRPAPDQRAGGGAPGLHRLQEALVRGGRRHRCPVD--SPQRAAGRR 289
            Q+QRP P  + GGGA  + + Q+    G R    P    +PQ+ AGR+
Sbjct: 963  QQQRPMPQPQQGGGARPMPQPQQG--GGARPMGAPQQGGAPQQGAGRQ 1008


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,925,666
Number of Sequences: 219361
Number of extensions: 1874678
Number of successful extensions: 5655
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5647
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)