ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd17e20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478915.1| Oryza sativa (japonica cultivar-group), mRNA 363 4e-97
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 363 4e-97
3dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic D... 363 4e-97
4dbj|AK121109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 4e-97
5dbj|AK067725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 4e-97
6gb|BT016400.1| Zea mays clone Contig233 mRNA sequence 283 3e-73
7gb|AY106359.1| Zea mays PCO114626 mRNA sequence 262 1e-66
8gb|AY107935.1| Zea mays PCO066270 mRNA sequence 54 5e-04
9gb|BT018748.1| Zea mays clone EL01N0522F03.d mRNA sequence 46 0.13
10gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete s... 44 0.50
11gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete se... 44 0.50
12gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete seq... 44 0.50
13emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chro... 44 0.50
14emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, co... 42 2.0
15gb|BT010062.1| Drosophila melanogaster LD15381 full insert cDNA 42 2.0
16gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, co... 42 2.0
17ref|NM_206019.1| Drosophila melanogaster CG9270-RB, transcript v... 42 2.0
18ref|NM_136235.2| Drosophila melanogaster CG9270-RA, transcript v... 42 2.0
19gb|AC007144.13|AC007144 Drosophila melanogaster, chromosome 2L, ... 42 2.0
20gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 42 2.0
21gb|AF027149.1|AF027149 Babesia bovis phosphomannomutase homolog ... 42 2.0
22gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 42 2.0
23gb|AF030059.1|AF030059 Babesia bovis strain T2b rhoptry associat... 42 2.0
24gb|AF030055.1|AF030055 Babesia bovis strain R1A rhoptry associat... 42 2.0
25gb|AF030054.1|AF030054 Babesia bovis strain T2b rhoptry associat... 42 2.0
26gb|AF030053.1|AF030053 Babesia bovis strain S2P rhoptry associat... 42 2.0
27gb|L77326.1|BBORA1P Babesia bovis (clone 4-1) rhoptry associated... 42 2.0
28gb|AC170813.3| Rhesus Macaque BAC CH250-421G6 (Children's Hospi... 42 2.0
29emb|AL844590.3| Mouse DNA sequence from clone RP23-335P15 on chr... 42 2.0
30gb|M38218.1|BBOMER60 Babesia bovis 60 kDa merozoite surface prot... 42 2.0
31gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, comp... 40 7.8
32gb|AY486475.1|AY486470S06 Human herpesvirus 5 strain Toledo geno... 40 7.8
33ref|XM_818324.1| Trypanosoma brucei TREU927 hypothetical protein... 40 7.8
34gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 40 7.8
35gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete ... 40 7.8
36gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete s... 40 7.8
37gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome 40 7.8
38gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, ... 40 7.8
39gb|AY191696.1| Ceuthostoma palawanense specimen-voucher Phil.Sp.... 40 7.8
40emb|Z46255.1|SC6584 S.cerevisiae chromosome VI lambda clone 40 7.8
41emb|Z28336.1|SCMDJ1P S.cerevisiae (AB972) MDJ1 gene for Mdj1p he... 40 7.8
42gb|AC156281.4| Mus musculus 6 BAC RP24-311B6 (Roswell Park Cance... 40 7.8
43gb|AC110053.3| Homo sapiens chromosome 8, clone CTD-3145H4, comp... 40 7.8
44gb|AC107904.6| Homo sapiens chromosome 8, clone RP11-644K4, comp... 40 7.8
45gb|AF309999.1| Human herpesvirus 5 isolate CR structural glycopr... 40 7.8
46gb|AF309998.1| Human herpesvirus 5 isolate LV structural glycopr... 40 7.8
47gb|AF309997.1| Human herpesvirus 5 isolate BR structural glycopr... 40 7.8
48gb|AF309996.1| Human herpesvirus 5 isolate SE structural glycopr... 40 7.8
49gb|AF309995.1| Human herpesvirus 5 isolate RL structural glycopr... 40 7.8
50gb|AF309993.1| Human herpesvirus 5 isolate HDu structural glycop... 40 7.8
51gb|AY033838.1| Ceuthostoma terminale maturase K (matK) gene, par... 40 7.8
52gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, comple... 40 7.8
53dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
54gb|AC009118.11| Homo sapiens chromosome 16 clone RP11-481J2, com... 40 7.8
55gb|AF390790.1| Human herpesvirus 5 isolate VT structural glycopr... 40 7.8
56gb|AF390785.1| Human herpesvirus 5 isolate MD structural glycopr... 40 7.8
57gb|AF390782.1| Human herpesvirus 5 isolate FC structural glycopr... 40 7.8
58gb|AF390780.1| Human herpesvirus 5 isolate BRT structural glycop... 40 7.8
59gb|AF390765.1| Human herpesvirus 5 isolate LA38 structural glyco... 40 7.8
60gb|AF390762.1| Human herpesvirus 5 isolate LA28 structural glyco... 40 7.8
61gb|AF390761.1| Human herpesvirus 5 isolate LA25 structural glyco... 40 7.8
62gb|AF390756.1| Human herpesvirus 5 isolate LA2 structural glycop... 40 7.8
63gb|AF390754.1| Human herpesvirus 5 isolate LA16 structural glyco... 40 7.8
64gb|AF390752.1| Human herpesvirus 5 isolate LA14 structural glyco... 40 7.8
65gb|AF390751.1| Human herpesvirus 5 isolate LA12 structural glyco... 40 7.8
66gb|AF390750.1| Human herpesvirus 5 isolate LA10 structural glyco... 40 7.8
67gb|AF390749.1| Human herpesvirus 5 isolate FR structural glycopr... 40 7.8
68gb|AF390748.1| Human herpesvirus 5 isolate CER structural glycop... 40 7.8
69gb|AF396736.1| Human herpesvirus 5 isolate SN envelope glycoprot... 40 7.8
70gb|AF396733.1| Human herpesvirus 5 isolate RL envelope glycoprot... 40 7.8
71gb|AF390834.1| Human herpesvirus 5 isolate A40-5A envelope glyco... 40 7.8
72gb|AF390832.1| Human herpesvirus 5 isolate A39-19E* envelope gly... 40 7.8
73gb|AF390820.1| Human herpesvirus 5 isolate A33-70A envelope glyc... 40 7.8
74gb|AF390819.1| Human herpesvirus 5 isolate A32-96A envelope glyc... 40 7.8
75gb|AF390816.1| Human herpesvirus 5 isolate A28-99A envelope glyc... 40 7.8
76gb|AF390815.1| Human herpesvirus 5 isolate A27-38A envelope glyc... 40 7.8
77gb|AF390814.1| Human herpesvirus 5 isolate A26-41A envelope glyc... 40 7.8
78gb|AF390813.1| Human herpesvirus 5 isolate A25-17A envelope glyc... 40 7.8
79gb|AF390810.1| Human herpesvirus 5 isolate A22-19F envelope glyc... 40 7.8
80gb|AF390805.1| Human herpesvirus 5 isolate A12-35A envelope glyc... 40 7.8
81gb|AF390857.1| Human herpesvirus 5 isolate C33 envelope glycopro... 40 7.8
82gb|AF390850.1| Human herpesvirus 5 isolate C22 envelope glycopro... 40 7.8
83emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on ch... 40 7.8
84emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 ... 40 7.8
85gb|AC153898.4| Mus musculus 6 BAC RP23-55J19 (Roswell Park Cance... 40 7.8
86emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in... 40 7.8
87gb|DQ332064.1| Synthetic construct Saccharomyces cerevisiae clon... 40 7.8
88gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
89emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298... 40 7.8
90gb|AC122444.4| Mus musculus BAC clone RP24-232I9 from 9, complet... 40 7.8
91emb|AL929063.4| Mouse DNA sequence from clone RP23-291N19 on chr... 40 7.8
92gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome... 40 7.8
93gb|L40608.1|PFAVAR1A Plasmodium falciparum (strain Dd2) variant-... 40 7.8
94emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chr... 40 7.8
95emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chro... 40 7.8
96emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chro... 40 7.8
97gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, comp... 40 7.8
98dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI co... 40 7.8
99dbj|AP001818.2| Homo sapiens genomic DNA, chromosome 4q22-q24, c... 40 7.8
100dbj|AB044947.1| Homo sapiens gene for NDRG4-B, NDRG4-Bvar, NDRG4... 40 7.8 
>ref|XM_478915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2469

 Score =  363 bits (183), Expect = 4e-97
 Identities = 360/410 (87%), Gaps = 18/410 (4%)
 Strand = Plus / Minus

                                                                        
Query: 78   aaaacacgcaagctaatgttgccataaatgggcaagataatacagcatccct--ggtata 135
            |||||| || ||||||||| |||||||||||||||||||||| ||||| |||  ||||||
Sbjct: 2270 aaaacaagcgagctaatgtagccataaatgggcaagataataaagcattcctttggtata 2211

                                                                        
Query: 136  caagtttgtcgtccgtatgacagaattccagcttatgttggaacaccttctaagtgtgtg 195
            ||||||||||   | |||||||| ||||||||||||||||||||||  ||||||| ||||
Sbjct: 2210 caagtttgtc---catatgacaggattccagcttatgttggaacac--tctaagtatgtg 2156

                                                                        
Query: 196  ccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgtagaaaatt 255
            ||||||||||||||||||||||||||  ||||||||  |||||| |||| |||| || ||
Sbjct: 2155 ccgcaatcaccactgcacatctcattcaaaaaccaa--gacctaatacatgtaggaa-tt 2099

                                                                        
Query: 256  aaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttggttg 315
            ||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||  
Sbjct: 2098 aaactaaaatctgaaaccttcacaaaacgtttgtattc-gctcctctagcatggtggt-- 2042

                                                                        
Query: 316  gtgtccgtaaaccacacctctggttagctagaaacaattaactaacctgtatattaatct 375
              |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 2041 --gtccataaaccacacctctggttagctagaaacaattaactaacccgtatattaacct 1984

                                                                        
Query: 376  gatatcaccaattcacagtactgcacctgaatacctgatataatgggtgtcttgcctatc 435
            ||||||||||||||| |||  ||||||||||||||||||||||||  | | |   |||||
Sbjct: 1983 gatatcaccaattcatagtcatgcacctgaatacctgatataatgcttctttcatctatc 1924

                                                              
Query: 436  ccaagtcatatatatgactataataatattctcgcctaggaagtgatacc 485
            |||||||  |||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 1923 ccaagtc--atatatgaatataatagtactctcg-ctaggaagtgatacc 1877
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  363 bits (183), Expect = 4e-97
 Identities = 360/410 (87%), Gaps = 18/410 (4%)
 Strand = Plus / Minus

                                                                            
Query: 78       aaaacacgcaagctaatgttgccataaatgggcaagataatacagcatccct--ggtata 135
                |||||| || ||||||||| |||||||||||||||||||||| ||||| |||  ||||||
Sbjct: 23655150 aaaacaagcgagctaatgtagccataaatgggcaagataataaagcattcctttggtata 23655091

                                                                            
Query: 136      caagtttgtcgtccgtatgacagaattccagcttatgttggaacaccttctaagtgtgtg 195
                ||||||||||   | |||||||| ||||||||||||||||||||||  ||||||| ||||
Sbjct: 23655090 caagtttgtc---catatgacaggattccagcttatgttggaacac--tctaagtatgtg 23655036

                                                                            
Query: 196      ccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgtagaaaatt 255
                ||||||||||||||||||||||||||  ||||||||  |||||| |||| |||| || ||
Sbjct: 23655035 ccgcaatcaccactgcacatctcattcaaaaaccaa--gacctaatacatgtaggaa-tt 23654979

                                                                            
Query: 256      aaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttggttg 315
                ||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||  
Sbjct: 23654978 aaactaaaatctgaaaccttcacaaaacgtttgtattc-gctcctctagcatggtggt-- 23654922

                                                                            
Query: 316      gtgtccgtaaaccacacctctggttagctagaaacaattaactaacctgtatattaatct 375
                  |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 23654921 --gtccataaaccacacctctggttagctagaaacaattaactaacccgtatattaacct 23654864

                                                                            
Query: 376      gatatcaccaattcacagtactgcacctgaatacctgatataatgggtgtcttgcctatc 435
                ||||||||||||||| |||  ||||||||||||||||||||||||  | | |   |||||
Sbjct: 23654863 gatatcaccaattcatagtcatgcacctgaatacctgatataatgcttctttcatctatc 23654804

                                                                  
Query: 436      ccaagtcatatatatgactataataatattctcgcctaggaagtgatacc 485
                |||||||  |||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 23654803 ccaagtc--atatatgaatataatagtactctcg-ctaggaagtgatacc 23654757
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>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1127_E01
          Length = 123787

 Score =  363 bits (183), Expect = 4e-97
 Identities = 360/410 (87%), Gaps = 18/410 (4%)
 Strand = Plus / Minus

                                                                          
Query: 78     aaaacacgcaagctaatgttgccataaatgggcaagataatacagcatccct--ggtata 135
              |||||| || ||||||||| |||||||||||||||||||||| ||||| |||  ||||||
Sbjct: 107591 aaaacaagcgagctaatgtagccataaatgggcaagataataaagcattcctttggtata 107532

                                                                          
Query: 136    caagtttgtcgtccgtatgacagaattccagcttatgttggaacaccttctaagtgtgtg 195
              ||||||||||   | |||||||| ||||||||||||||||||||||  ||||||| ||||
Sbjct: 107531 caagtttgtc---catatgacaggattccagcttatgttggaacac--tctaagtatgtg 107477

                                                                          
Query: 196    ccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgtagaaaatt 255
              ||||||||||||||||||||||||||  ||||||||  |||||| |||| |||| || ||
Sbjct: 107476 ccgcaatcaccactgcacatctcattcaaaaaccaa--gacctaatacatgtaggaa-tt 107420

                                                                          
Query: 256    aaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttggttg 315
              ||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||  
Sbjct: 107419 aaactaaaatctgaaaccttcacaaaacgtttgtattc-gctcctctagcatggtggt-- 107363

                                                                          
Query: 316    gtgtccgtaaaccacacctctggttagctagaaacaattaactaacctgtatattaatct 375
                |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 107362 --gtccataaaccacacctctggttagctagaaacaattaactaacccgtatattaacct 107305

                                                                          
Query: 376    gatatcaccaattcacagtactgcacctgaatacctgatataatgggtgtcttgcctatc 435
              ||||||||||||||| |||  ||||||||||||||||||||||||  | | |   |||||
Sbjct: 107304 gatatcaccaattcatagtcatgcacctgaatacctgatataatgcttctttcatctatc 107245

                                                                
Query: 436    ccaagtcatatatatgactataataatattctcgcctaggaagtgatacc 485
              |||||||  |||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 107244 ccaagtc--atatatgaatataatagtactctcg-ctaggaagtgatacc 107198
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>dbj|AK121109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072P12, full
            insert sequence
          Length = 1972

 Score =  363 bits (183), Expect = 4e-97
 Identities = 360/410 (87%), Gaps = 18/410 (4%)
 Strand = Plus / Minus

                                                                        
Query: 78   aaaacacgcaagctaatgttgccataaatgggcaagataatacagcatccct--ggtata 135
            |||||| || ||||||||| |||||||||||||||||||||| ||||| |||  ||||||
Sbjct: 1849 aaaacaagcgagctaatgtagccataaatgggcaagataataaagcattcctttggtata 1790

                                                                        
Query: 136  caagtttgtcgtccgtatgacagaattccagcttatgttggaacaccttctaagtgtgtg 195
            ||||||||||   | |||||||| ||||||||||||||||||||||  ||||||| ||||
Sbjct: 1789 caagtttgtc---catatgacaggattccagcttatgttggaacac--tctaagtatgtg 1735

                                                                        
Query: 196  ccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgtagaaaatt 255
            ||||||||||||||||||||||||||  ||||||||  |||||| |||| |||| || ||
Sbjct: 1734 ccgcaatcaccactgcacatctcattcaaaaaccaa--gacctaatacatgtaggaa-tt 1678

                                                                        
Query: 256  aaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttggttg 315
            ||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||  
Sbjct: 1677 aaactaaaatctgaaaccttcacaaaacgtttgtattc-gctcctctagcatggtggt-- 1621

                                                                        
Query: 316  gtgtccgtaaaccacacctctggttagctagaaacaattaactaacctgtatattaatct 375
              |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 1620 --gtccataaaccacacctctggttagctagaaacaattaactaacccgtatattaacct 1563

                                                                        
Query: 376  gatatcaccaattcacagtactgcacctgaatacctgatataatgggtgtcttgcctatc 435
            ||||||||||||||| |||  ||||||||||||||||||||||||  | | |   |||||
Sbjct: 1562 gatatcaccaattcatagtcatgcacctgaatacctgatataatgcttctttcatctatc 1503

                                                              
Query: 436  ccaagtcatatatatgactataataatattctcgcctaggaagtgatacc 485
            |||||||  |||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 1502 ccaagtc--atatatgaatataatagtactctcg-ctaggaagtgatacc 1456
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>dbj|AK067725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G21, full
            insert sequence
          Length = 2469

 Score =  363 bits (183), Expect = 4e-97
 Identities = 360/410 (87%), Gaps = 18/410 (4%)
 Strand = Plus / Minus

                                                                        
Query: 78   aaaacacgcaagctaatgttgccataaatgggcaagataatacagcatccct--ggtata 135
            |||||| || ||||||||| |||||||||||||||||||||| ||||| |||  ||||||
Sbjct: 2270 aaaacaagcgagctaatgtagccataaatgggcaagataataaagcattcctttggtata 2211

                                                                        
Query: 136  caagtttgtcgtccgtatgacagaattccagcttatgttggaacaccttctaagtgtgtg 195
            ||||||||||   | |||||||| ||||||||||||||||||||||  ||||||| ||||
Sbjct: 2210 caagtttgtc---catatgacaggattccagcttatgttggaacac--tctaagtatgtg 2156

                                                                        
Query: 196  ccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgtagaaaatt 255
            ||||||||||||||||||||||||||  ||||||||  |||||| |||| |||| || ||
Sbjct: 2155 ccgcaatcaccactgcacatctcattcaaaaaccaa--gacctaatacatgtaggaa-tt 2099

                                                                        
Query: 256  aaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttggttg 315
            ||||||||||||||||||||||||||| |||||||| | |||||||||||||| ||||  
Sbjct: 2098 aaactaaaatctgaaaccttcacaaaacgtttgtattc-gctcctctagcatggtggt-- 2042

                                                                        
Query: 316  gtgtccgtaaaccacacctctggttagctagaaacaattaactaacctgtatattaatct 375
              |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 2041 --gtccataaaccacacctctggttagctagaaacaattaactaacccgtatattaacct 1984

                                                                        
Query: 376  gatatcaccaattcacagtactgcacctgaatacctgatataatgggtgtcttgcctatc 435
            ||||||||||||||| |||  ||||||||||||||||||||||||  | | |   |||||
Sbjct: 1983 gatatcaccaattcatagtcatgcacctgaatacctgatataatgcttctttcatctatc 1924

                                                              
Query: 436  ccaagtcatatatatgactataataatattctcgcctaggaagtgatacc 485
            |||||||  |||||||| ||||||| || ||||| |||||||||||||||
Sbjct: 1923 ccaagtc--atatatgaatataatagtactctcg-ctaggaagtgatacc 1877
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>gb|BT016400.1| Zea mays clone Contig233 mRNA sequence
          Length = 913

 Score =  283 bits (143), Expect = 3e-73
 Identities = 362/421 (85%), Gaps = 23/421 (5%)
 Strand = Plus / Plus

                                                                       
Query: 77  aaaaacacgcaagctaatgttgccataaatgggcaa-gataatacagcatccct--ggta 133
           ||||||| |||||||||||| ||||||||||||||| |||||||||||||  ||  ||||
Sbjct: 119 aaaaacatgcaagctaatgtagccataaatgggcaaagataatacagcatttctttggta 178

                                                                       
Query: 134 tacaagtttgtcgt-ccgtatgacagaattccagcttatgttggaacaccttctaagtgt 192
           ||||||||| || | ||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 179 tacaagtttatccttccgtatgacagaattccagcttatgttggaaca-cttctaagttt 237

                                                                       
Query: 193 gtgccgcaatcaccactgcacatctcattggaaaaccaaaagacctagtacacgtagaaa 252
           |||||||||||| ||||||||||||||||  |||| |  ||| |||| || | |||| ||
Sbjct: 238 gtgccgcaatcaacactgcacatctcatttaaaaaac-gaaggcctaatagatgtag-aa 295

                                                                       
Query: 253 attaaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttgg 312
           ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |   
Sbjct: 296 attaaactaaaatctgaaagcttcacaaaatgtttgtat-ccgctcctctagcattt--- 351

                                                                       
Query: 313 ttggtgtccgtaaaccacacctctgg-----ttagctagaaacaattaactaacctgtat 367
           |||||||  |||||||||||||||||     ||| ||||||||||  |||||||||||||
Sbjct: 352 ttggtgt-tgtaaaccacacctctggttaccttaactagaaacaagcaactaacctgtat 410

                                                                       
Query: 368 attaatctgatatcaccaattcacagtactgcacctgaatacctgata---taatgggtg 424
           |||||||||| ||||||||||||||||  ||||||||||  |||||||   || ||||| 
Sbjct: 411 attaatctgacatcaccaattcacagtcatgcacctgaaagcctgatatagtagtgggta 470

                                                                       
Query: 425 tcttgcctatcccaagtcatatatatgactataataatattctcgcctaggaagtgatac 484
           | |  |||||||||||||  || ||||| |||||||||| |||  |||||||||||||||
Sbjct: 471 tttcacctatcccaagtc--atgtatgaatataataatactct-tcctaggaagtgatac 527

            
Query: 485 c 485
           |
Sbjct: 528 c 528
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>gb|AY106359.1| Zea mays PCO114626 mRNA sequence
          Length = 1099

 Score =  262 bits (132), Expect = 1e-66
 Identities = 361/422 (85%), Gaps = 24/422 (5%)
 Strand = Plus / Minus

                                                                       
Query: 77  aaaaacacgcaagctaatgttgccataaatgggcaa-gataatacagcatccct--ggta 133
           ||||||| |||||||| ||| ||||||||||||||| |||||||||||||  ||  ||||
Sbjct: 999 aaaaacatgcaagctattgtagccataaatgggcaaagataatacagcatttctttggta 940

                                                                       
Query: 134 tacaagtttgtcgt-ccgtatgacagaattccagcttatgttggaacaccttctaagtgt 192
           ||||||||| || | ||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 939 tacaagtttatccttccgtatgacagaattccagcttatgttggaaca-cttctaagttt 881

                                                                       
Query: 193 gtgccgcaatc-accactgcacatctcattggaaaaccaaaagacctagtacacgtagaa 251
           ||||||||||| | ||||||||||||||||  |||| |  ||| |||| || | |||| |
Sbjct: 880 gtgccgcaatcaaacactgcacatctcatttaaaaaac-gaaggcctaatagatgtag-a 823

                                                                       
Query: 252 aattaaactaaaatctgaaaccttcacaaaatgtttgtatcccgctcctctagcatgttg 311
           |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |  
Sbjct: 822 aattaaactaaaatctgaaagcttcacaaaatgtttgtat-ccgctcctctagcattt-- 766

                                                                       
Query: 312 gttggtgtccgtaaaccacacctctgg-----ttagctagaaacaattaactaacctgta 366
            |||||||  |||||||||||||||||     ||| ||||||||||  ||||||||||||
Sbjct: 765 -ttggtgt-tgtaaaccacacctctggttaccttaactagaaacaagcaactaacctgta 708

                                                                       
Query: 367 tattaatctgatatcaccaattcacagtactgcacctgaatacctgata---taatgggt 423
           ||||||||||| ||||||||||||||||  ||||||||||  |||||||   || |||||
Sbjct: 707 tattaatctgacatcaccaattcacagtcatgcacctgaaagcctgatatagtagtgggt 648

                                                                       
Query: 424 gtcttgcctatcccaagtcatatatatgactataataatattctcgcctaggaagtgata 483
            | |  |||||||||||||  || ||||| |||||||||| |||  ||||||||||||||
Sbjct: 647 atttcacctatcccaagtc--atgtatgaatataataatactct-tcctaggaagtgata 591

             
Query: 484 cc 485
           ||
Sbjct: 590 cc 589
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>gb|AY107935.1| Zea mays PCO066270 mRNA sequence
          Length = 589

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 103 aaatgggcaagataatacagcatccct 129
           |||||||||||||||||||||||||||
Sbjct: 540 aaatgggcaagataatacagcatccct 514



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 200 aatcaccactgcacatctcattggaaaaccaaaag 234
           |||||||||| |||||||||||  |||||||||||
Sbjct: 425 aatcaccactacacatctcattcaaaaaccaaaag 391
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>gb|BT018748.1| Zea mays clone EL01N0522F03.d mRNA sequence
          Length = 1884

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 355  aactaacctgtatattaatctga 377
            |||||||||||||||||||||||
Sbjct: 1557 aactaacctgtatattaatctga 1535
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>gb|AC161241.18| Medicago truncatula clone mth2-193c3, complete sequence
          Length = 125129

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 443   atatatatgactataataatat 464
             ||||||||||||||||||||||
Sbjct: 19656 atatatatgactataataatat 19677
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>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence
          Length = 110437

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 443  atatatatgactataataatat 464
            ||||||||||||||||||||||
Sbjct: 6609 atatatatgactataataatat 6588
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>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence
          Length = 129197

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 443   atatatatgactataataatat 464
             ||||||||||||||||||||||
Sbjct: 16868 atatatatgactataataatat 16847
to top
>emb|AL831710.8| Mouse DNA sequence from clone RP23-29K19 on chromosome 4, complete
             sequence
          Length = 191635

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 32/34 (94%), Gaps = 1/34 (2%)
 Strand = Plus / Minus

                                               
Query: 487   tttatattgttcaggc-acatgcattacacatct 519
             |||||||||||||| | |||||||||||||||||
Sbjct: 28156 tttatattgttcagtccacatgcattacacatct 28123
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>emb|CR853300.3| Wallaby DNA sequence from clone MEKBa-585D22, complete sequence
          Length = 165531

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 214    atctcattggaaaaccaaaagacct 238
              |||||||||||||| ||||||||||
Sbjct: 127718 atctcattggaaaaacaaaagacct 127694
to top
>gb|BT010062.1| Drosophila melanogaster LD15381 full insert cDNA
          Length = 5070

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 399  cacctgaatacctgatataat 419
            |||||||||||||||||||||
Sbjct: 1891 cacctgaatacctgatataat 1871
to top
>gb|AC087385.5| Homo sapiens chromosome 15, clone RP11-745A24, complete sequence
          Length = 190890

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    agaaaattaaactaaaatctg 268
              |||||||||||||||||||||
Sbjct: 139067 agaaaattaaactaaaatctg 139087
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>ref|NM_206019.1| Drosophila melanogaster CG9270-RB, transcript variant B (CG9270),
           mRNA
          Length = 3810

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 399 cacctgaatacctgatataat 419
           |||||||||||||||||||||
Sbjct: 645 cacctgaatacctgatataat 625
to top
>ref|NM_136235.2| Drosophila melanogaster CG9270-RA, transcript variant A (CG9270),
           mRNA
          Length = 3570

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 399 cacctgaatacctgatataat 419
           |||||||||||||||||||||
Sbjct: 405 cacctgaatacctgatataat 385
to top
>gb|AC007144.13|AC007144 Drosophila melanogaster, chromosome 2L, region 38F-39A, BAC clone
             BACR06G10, complete sequence
          Length = 176082

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 399   cacctgaatacctgatataat 419
             |||||||||||||||||||||
Sbjct: 93724 cacctgaatacctgatataat 93744
to top
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
              sequence
          Length = 270158

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 399    cacctgaatacctgatataat 419
              |||||||||||||||||||||
Sbjct: 192542 cacctgaatacctgatataat 192562
to top
>gb|AF027149.1|AF027149 Babesia bovis phosphomannomutase homolog (pmm), rhoptry associated
            protein-1 (rap-1) allele 1, rhoptry associated protein-1
            (rap-1) allele 2, and DnaJ homolog genes, complete cds
          Length = 11184

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 6466 aatattctcgcctaggaagtg 6446



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 3588 aatattctcgcctaggaagtg 3568
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 222     ggaaaaccaaaagacctagta 242
               |||||||||||||||||||||
Sbjct: 2161785 ggaaaaccaaaagacctagta 2161765
to top
>gb|AF030059.1|AF030059 Babesia bovis strain T2b rhoptry associated protein-1 (rap-1) gene,
            complete cds
          Length = 2325

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 1308 aatattctcgcctaggaagtg 1288
to top
>gb|AF030055.1|AF030055 Babesia bovis strain R1A rhoptry associated protein-1 (rap-1) gene,
            complete cds
          Length = 2089

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 1308 aatattctcgcctaggaagtg 1288
to top
>gb|AF030054.1|AF030054 Babesia bovis strain T2b rhoptry associated protein-1 (rap-1) gene,
            complete cds
          Length = 2089

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 1309 aatattctcgcctaggaagtg 1289
to top
>gb|AF030053.1|AF030053 Babesia bovis strain S2P rhoptry associated protein-1 (rap-1) gene,
            complete cds
          Length = 2089

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 1308 aatattctcgcctaggaagtg 1288
to top
>gb|L77326.1|BBORA1P Babesia bovis (clone 4-1) rhoptry associated protein 1 (RAP-1) gene
           1, 3' end of cds, rhoptry associated protein 1 (RAP-1)
           gene 2, complete cds
          Length = 2549

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 460 aatattctcgcctaggaagtg 480
           |||||||||||||||||||||
Sbjct: 928 aatattctcgcctaggaagtg 908
to top
>gb|AC170813.3| Rhesus Macaque  BAC CH250-421G6 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 165221

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 424   gtcttgcctatcccaagtcat 444
             |||||||||||||||||||||
Sbjct: 44996 gtcttgcctatcccaagtcat 44976
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>emb|AL844590.3| Mouse DNA sequence from clone RP23-335P15 on chromosome 2, complete
              sequence
          Length = 231459

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 490    atattgttcaggcacatgcat 510
              |||||||||||||||||||||
Sbjct: 145191 atattgttcaggcacatgcat 145171
to top
>gb|M38218.1|BBOMER60 Babesia bovis 60 kDa merozoite surface protein mRNA, complete cds
          Length = 1990

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 460  aatattctcgcctaggaagtg 480
            |||||||||||||||||||||
Sbjct: 1408 aatattctcgcctaggaagtg 1388
to top
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence
          Length = 180370

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ccaattcacagtactgcacc 402
             ||||||||||||||||||||
Sbjct: 50291 ccaattcacagtactgcacc 50272
to top
>gb|AY486475.1|AY486470S06 Human herpesvirus 5 strain Toledo genome, partial sequence
          Length = 16210

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 224  aaaaccaaaagacctagtac 243
            ||||||||||||||||||||
Sbjct: 7743 aaaaccaaaagacctagtac 7724
to top
>ref|XM_818324.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.389.1620)
            partial mRNA
          Length = 6579

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 70   gaagaggaaaaacacgcaag 89
            ||||||||||||||||||||
Sbjct: 4540 gaagaggaaaaacacgcaag 4559
to top
>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    aaaaccaaaagacctagtac 243
              ||||||||||||||||||||
Sbjct: 121122 aaaaccaaaagacctagtac 121141
to top
>gb|AC146905.1| Human Herpesvirus 5 Toledo-BAC isolate, complete sequence
          Length = 226889

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 224    aaaaccaaaagacctagtac 243
              ||||||||||||||||||||
Sbjct: 116563 aaaaccaaaagacctagtac 116582
to top
>gb|AC146851.1| Human Herpesvirus 5 Towne-BAC isolate, complete sequence
          Length = 229483

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    aaaaccaaaagacctagtac 243
              ||||||||||||||||||||
Sbjct: 140307 aaaaccaaaagacctagtac 140288
to top
>gb|AY315197.1| Human herpesvirus 5 strain Towne, complete genome
          Length = 231236

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 224    aaaaccaaaagacctagtac 243
              ||||||||||||||||||||
Sbjct: 105280 aaaaccaaaagacctagtac 105261
to top
>gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, RP23-193K14, complete
              sequence
          Length = 214157

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    atggcactctgcttgtctga 569
              ||||||||||||||||||||
Sbjct: 178069 atggcactctgcttgtctga 178088
to top
>gb|AY191696.1| Ceuthostoma palawanense specimen-voucher Phil.Sp.7 NSW maturase K
           (matK) gene, partial cds; chloroplast gene for
           chloroplast product
          Length = 1383

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  ttgccataaatgggcaagataata 119
           ||||||||||||| ||||||||||
Sbjct: 560 ttgccataaatggacaagataata 537
to top
>emb|Z46255.1|SC6584 S.cerevisiae chromosome VI lambda clone
          Length = 19882

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    agaagaggaaaaacacgcaa 88
             ||||||||||||||||||||
Sbjct: 13079 agaagaggaaaaacacgcaa 13098
to top
>emb|Z28336.1|SCMDJ1P S.cerevisiae (AB972) MDJ1 gene for Mdj1p heat shock protein
          Length = 2827

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   agaagaggaaaaacacgcaa 88
            ||||||||||||||||||||
Sbjct: 2492 agaagaggaaaaacacgcaa 2511
to top
>gb|AC156281.4| Mus musculus 6 BAC RP24-311B6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 197360

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    aaaatctgaaaccttcacaa 280
              ||||||||||||||||||||
Sbjct: 117415 aaaatctgaaaccttcacaa 117396
to top
>gb|AC110053.3| Homo sapiens chromosome 8, clone CTD-3145H4, complete sequence
          Length = 142225

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 544    ttcaggatggcactctgctt 563
              ||||||||||||||||||||
Sbjct: 123246 ttcaggatggcactctgctt 123265
to top
>gb|AC107904.6| Homo sapiens chromosome 8, clone RP11-644K4, complete sequence
          Length = 171676

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 544   ttcaggatggcactctgctt 563
             ||||||||||||||||||||
Sbjct: 76147 ttcaggatggcactctgctt 76128
to top
>gb|AF309999.1| Human herpesvirus 5 isolate CR structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309998.1| Human herpesvirus 5 isolate LV structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309997.1| Human herpesvirus 5 isolate BR structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309996.1| Human herpesvirus 5 isolate SE structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309995.1| Human herpesvirus 5 isolate RL structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF309993.1| Human herpesvirus 5 isolate HDu structural glycoprotein UL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AY033838.1| Ceuthostoma terminale maturase K (matK) gene, partial cds;
           chloroplast gene for chloroplast product
          Length = 1069

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 96  ttgccataaatgggcaagataata 119
           ||||||||||||| ||||||||||
Sbjct: 406 ttgccataaatggacaagataata 383
to top
>gb|AC074120.9| Homo sapiens BAC clone RP11-724M22 from 4, complete sequence
          Length = 150013

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   tcatatatatgactataata 460
             ||||||||||||||||||||
Sbjct: 73059 tcatatatatgactataata 73078
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 521      caatgctatcatttaccctcaacttcaggatg 552
                |||| |||||||||| | ||||||||||||||
Sbjct: 22266269 caatactatcatttagcttcaacttcaggatg 22266238
to top
>gb|AC009118.11| Homo sapiens chromosome 16 clone RP11-481J2, complete sequence
          Length = 187988

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   ccctcaacttcaggatggca 555
             ||||||||||||||||||||
Sbjct: 61944 ccctcaacttcaggatggca 61963
to top
>gb|AF390790.1| Human herpesvirus 5 isolate VT structural glycoprotein gpUL73 gene,
           complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390785.1| Human herpesvirus 5 isolate MD structural glycoprotein gpUL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390782.1| Human herpesvirus 5 isolate FC structural glycoprotein gpUL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
to top
>gb|AF390780.1| Human herpesvirus 5 isolate BRT structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390765.1| Human herpesvirus 5 isolate LA38 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390762.1| Human herpesvirus 5 isolate LA28 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390761.1| Human herpesvirus 5 isolate LA25 structural glycoprotein gpUL73
           gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390756.1| Human herpesvirus 5 isolate LA2 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390754.1| Human herpesvirus 5 isolate LA16 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390752.1| Human herpesvirus 5 isolate LA14 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390751.1| Human herpesvirus 5 isolate LA12 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390750.1| Human herpesvirus 5 isolate LA10 structural glycoprotein gpUL73
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390749.1| Human herpesvirus 5 isolate FR structural glycoprotein gpUL73 gene,
           complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390748.1| Human herpesvirus 5 isolate CER structural glycoprotein gpUL73
           gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF396736.1| Human herpesvirus 5 isolate SN envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF396733.1| Human herpesvirus 5 isolate RL envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390834.1| Human herpesvirus 5 isolate A40-5A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390832.1| Human herpesvirus 5 isolate A39-19E* envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390820.1| Human herpesvirus 5 isolate A33-70A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390819.1| Human herpesvirus 5 isolate A32-96A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390816.1| Human herpesvirus 5 isolate A28-99A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390815.1| Human herpesvirus 5 isolate A27-38A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390814.1| Human herpesvirus 5 isolate A26-41A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390813.1| Human herpesvirus 5 isolate A25-17A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390810.1| Human herpesvirus 5 isolate A22-19F envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390805.1| Human herpesvirus 5 isolate A12-35A envelope glycoprotein gpUL73
           (UL73) gene, complete cds
          Length = 408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390857.1| Human herpesvirus 5 isolate C33 envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>gb|AF390850.1| Human herpesvirus 5 isolate C22 envelope glycoprotein gpUL73 (UL73)
           gene, complete cds
          Length = 411

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 aaaaccaaaagacctagtac 243
           ||||||||||||||||||||
Sbjct: 38  aaaaccaaaagacctagtac 19
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>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete
             sequence
          Length = 161244

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   atatatgactataataatat 464
             ||||||||||||||||||||
Sbjct: 37429 atatatgactataataatat 37410
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>emb|CR450687.16| Zebrafish DNA sequence from clone CH211-204A13 in linkage group 19,
             complete sequence
          Length = 143150

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 347   aaacaattaactaacctgtatatt 370
             |||||||||||| |||||||||||
Sbjct: 63050 aaacaattaacttacctgtatatt 63073
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>gb|AC153898.4| Mus musculus 6 BAC RP23-55J19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 234760

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    aaaatctgaaaccttcacaa 280
              ||||||||||||||||||||
Sbjct: 225972 aaaatctgaaaccttcacaa 225991
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>emb|BX510915.23| Zebrafish DNA sequence from clone DKEY-24M12 in linkage group 21,
              complete sequence
          Length = 253718

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      aatagtttttactagtaaag 26
              ||||||||||||||||||||
Sbjct: 162828 aatagtttttactagtaaag 162809
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>gb|DQ332064.1| Synthetic construct Saccharomyces cerevisiae clone FLH201165.01X MDJ1
            gene, complete sequence
          Length = 1536

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   agaagaggaaaaacacgcaa 88
            ||||||||||||||||||||
Sbjct: 1431 agaagaggaaaaacacgcaa 1450
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 521      caatgctatcatttaccctcaacttcaggatg 552
                |||| |||||||||| | ||||||||||||||
Sbjct: 22194614 caatactatcatttagcttcaacttcaggatg 22194583
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>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109610

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 521   caatgctatcatttaccctcaacttcaggatg 552
             |||| |||||||||| | ||||||||||||||
Sbjct: 95485 caatactatcatttagcttcaacttcaggatg 95516
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>gb|AC122444.4| Mus musculus BAC clone RP24-232I9 from 9, complete sequence
          Length = 184253

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 202  tcaccactgcacatctcattggaa 225
            |||||||||| |||||||||||||
Sbjct: 1324 tcaccactgcccatctcattggaa 1301
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>emb|AL929063.4| Mouse DNA sequence from clone RP23-291N19 on chromosome 2, complete
             sequence
          Length = 120516

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 419   tgggtgtcttgcctatcccaagtc 442
             |||||| |||||||||||||||||
Sbjct: 27797 tgggtgccttgcctatcccaagtc 27774
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>gb|AC162921.3| Mus musculus BAC clone RP23-342H1 from chromosome 9, complete sequence
          Length = 254666

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 202    tcaccactgcacatctcattggaa 225
              |||||||||| |||||||||||||
Sbjct: 197421 tcaccactgcccatctcattggaa 197398
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>gb|L40608.1|PFAVAR1A Plasmodium falciparum (strain Dd2) variant-specific surface protein
            (var-1) gene, complete cds
          Length = 19124

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 446  tatatgactataataatatt 465
            ||||||||||||||||||||
Sbjct: 2092 tatatgactataataatatt 2111
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>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete
              sequence
          Length = 212385

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    atggcactctgcttgtctga 569
              ||||||||||||||||||||
Sbjct: 144346 atggcactctgcttgtctga 144327
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>emb|AL772381.5| Mouse DNA sequence from clone RP23-358I3 on chromosome 4, complete
            sequence
          Length = 199350

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 502  cacatgcattacacatctcc 521
            ||||||||||||||||||||
Sbjct: 2769 cacatgcattacacatctcc 2788
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>emb|AL671895.9| Mouse DNA sequence from clone RP23-342E4 on chromosome 4, complete
             sequence
          Length = 200368

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   acaccttctaagtgtgtgcc 197
             ||||||||||||||||||||
Sbjct: 60302 acaccttctaagtgtgtgcc 60283
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>gb|AC098478.2| Homo sapiens chromosome 3 clone RP11-750K11, complete sequence
          Length = 217346

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  aaaattaaactaaaatctga 269
            ||||||||||||||||||||
Sbjct: 4328 aaaattaaactaaaatctga 4347
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>dbj|D50617.1|YSCCHRVIN Saccharomyces cerevisiae chromosome VI complete DNA sequence
          Length = 270148

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     agaagaggaaaaacacgcaa 88
              ||||||||||||||||||||
Sbjct: 104800 agaagaggaaaaacacgcaa 104781
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>dbj|AP001818.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2222M9, complete
             sequence
          Length = 116321

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 441   tcatatatatgactataata 460
             ||||||||||||||||||||
Sbjct: 54916 tcatatatatgactataata 54935
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>dbj|AB044947.1| Homo sapiens gene for NDRG4-B, NDRG4-Bvar, NDRG4-H, complete cds
          Length = 31217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 536  ccctcaacttcaggatggca 555
            ||||||||||||||||||||
Sbjct: 3405 ccctcaacttcaggatggca 3386


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,813,764
Number of Sequences: 3902068
Number of extensions: 5813764
Number of successful extensions: 101321
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 101004
Number of HSP's gapped (non-prelim): 267
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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