>UBL5_ARATH (Q9FGZ9) Ubiquitin-like protein 5|
          Length = 73

 Score =  146 bits (369), Expect = 4e-35
 Identities = 70/73 (95%), Positives = 71/73 (97%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWY IYKDHITL DY
Sbjct: 1   MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 319 EIHDGMGLELYYN 281
           EIHDGMGLELYYN
Sbjct: 61  EIHDGMGLELYYN 73

>UBL5_PSAOB (Q791B0) Ubiquitin-like protein 5 (Beacon protein)|
          Length = 73

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWYTI+KDH++LGDY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 319 EIHDGMGLELYY 284
           EIHDGM LELYY
Sbjct: 61  EIHDGMNLELYY 72

>UBL5_MOUSE (Q9EPV8) Ubiquitin-like protein 5|
          Length = 73

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWYTI+KDH++LGDY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 319 EIHDGMGLELYY 284
           EIHDGM LELYY
Sbjct: 61  EIHDGMNLELYY 72

>UBL5_MESAU (Q6EGX7) Ubiquitin-like protein 5 (Beacon protein)|
          Length = 73

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWYTI+KDH++LGDY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 319 EIHDGMGLELYY 284
           EIHDGM LELYY
Sbjct: 61  EIHDGMNLELYY 72

>UBL5_HUMAN (Q9BZL1) Ubiquitin-like protein 5|
          Length = 73

 Score =  130 bits (326), Expect = 4e-30
 Identities = 60/72 (83%), Positives = 66/72 (91%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWYTI+KDH++LGDY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 319 EIHDGMGLELYY 284
           EIHDGM LELYY
Sbjct: 61  EIHDGMNLELYY 72

>UBL5_BRARE (Q7SXF2) Ubiquitin-like protein 5|
          Length = 73

 Score =  129 bits (325), Expect = 5e-30
 Identities = 59/72 (81%), Positives = 68/72 (94%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVV NDRLGKKVRVKCN++DTIGDLKKL+AAQTGTR EKI ++KWYTI+K+H++LGDY
Sbjct: 1   MIEVVCNDRLGKKVRVKCNQEDTIGDLKKLIAAQTGTRWEKIVLKKWYTIFKNHVSLGDY 60

Query: 319 EIHDGMGLELYY 284
           EIHDGM LELYY
Sbjct: 61  EIHDGMNLELYY 72

>UBL5_CAEEL (P91302) Ubiquitin-like protein 5|
          Length = 73

 Score =  123 bits (308), Expect = 5e-28
 Identities = 56/72 (77%), Positives = 63/72 (87%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIE+ +NDRLGKKVR+KCN  DTIGDLKKL+AAQTGTR EKI ++KWYTIYKDHITL DY
Sbjct: 1   MIEITVNDRLGKKVRIKCNPSDTIGDLKKLIAAQTGTRWEKIVLKKWYTIYKDHITLMDY 60

Query: 319 EIHDGMGLELYY 284
           EIH+G   ELYY
Sbjct: 61  EIHEGFNFELYY 72

>UBL5_DROME (Q9V998) Ubiquitin-like protein 5|
          Length = 73

 Score =  122 bits (307), Expect = 6e-28
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIE+  NDRLGKKVRVKCN DDTIGDLKKL+AAQTGT+ EKI ++KWYTI+KD I L DY
Sbjct: 1   MIEITCNDRLGKKVRVKCNPDDTIGDLKKLIAAQTGTKHEKIVLKKWYTIFKDPIRLSDY 60

Query: 319 EIHDGMGLELYY 284
           EIHDGM LELYY
Sbjct: 61  EIHDGMNLELYY 72

>HUB1_SCHPO (O94650) Ubiquitin-like modifier hub1|
          Length = 73

 Score =  114 bits (284), Expect = 3e-25
 Identities = 51/73 (69%), Positives = 63/73 (86%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEV+ NDRLGKKVRVKC  DDT+GD KKLVAAQTGT   +I ++KW++++KD+ITL DY
Sbjct: 1   MIEVLCNDRLGKKVRVKCMPDDTVGDFKKLVAAQTGTDPRRIVLKKWHSVFKDNITLADY 60

Query: 319 EIHDGMGLELYYN 281
           EIHDGM LE+YY+
Sbjct: 61  EIHDGMSLEMYYS 73

>HUB1_DEBHA (Q6BUP7) Ubiquitin-like modifier HUB1|
          Length = 73

 Score =  103 bits (256), Expect = 5e-22
 Identities = 46/73 (63%), Positives = 58/73 (79%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEV+ NDRLGKK++VKC   DTIGDLKK+++ Q GT  EKI ++K Y +YKDHITL DY
Sbjct: 1   MIEVLANDRLGKKIKVKCMPTDTIGDLKKIISLQIGTSYEKIVLKKGYQVYKDHITLDDY 60

Query: 319 EIHDGMGLELYYN 281
           E+H+G   ELYY+
Sbjct: 61  EVHNGFNFELYYS 73

>HUB1_CANGA (Q6FIX7) Ubiquitin-like modifier HUB1|
          Length = 73

 Score = 99.4 bits (246), Expect = 7e-21
 Identities = 45/73 (61%), Positives = 58/73 (79%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEV++NDRLGKK+RVKC EDDT+GD KK+++ Q G +  KI +QK  ++ KDHITL DY
Sbjct: 1   MIEVLVNDRLGKKIRVKCLEDDTVGDFKKVLSVQLGMQPSKIVLQKGGSVLKDHITLYDY 60

Query: 319 EIHDGMGLELYYN 281
           E+HD   LELYY+
Sbjct: 61  EVHDNTNLELYYS 73

>HUB1_KLULA (Q6CU12) Ubiquitin-like modifier HUB1|
          Length = 74

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT-RAEKIRIQKWYTIYKDHITLGD 323
           MIEV++NDRLGKKV VKC  +DT+GD KK+++ Q GT  A KI +QK  ++ KDHITL D
Sbjct: 1   MIEVLVNDRLGKKVNVKCLSEDTVGDFKKVLSVQLGTASASKIVLQKGGSVLKDHITLED 60

Query: 322 YEIHDGMGLELYY 284
           YE+HDG  LELYY
Sbjct: 61  YEVHDGTNLELYY 73

>HUB1_YEAST (Q6Q546) Ubiquitin-like modifier HUB1|
          Length = 73

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 44/72 (61%), Positives = 57/72 (79%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEVV+NDRLGKKVRVKC  +D++GD KK+++ Q GT+  KI +QK  ++ KDHI+L DY
Sbjct: 1   MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKGGSVLKDHISLEDY 60

Query: 319 EIHDGMGLELYY 284
           E+HD   LELYY
Sbjct: 61  EVHDQTNLELYY 72

>HUB1_ASHGO (Q756X3) Ubiquitin-like modifier HUB1|
          Length = 73

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 43/72 (59%), Positives = 54/72 (75%)
 Frame = -3

Query: 499 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYTIYKDHITLGDY 320
           MIEV++NDRLGKK+RVKC   D++GDLKK++A Q GT   K+ + K     KDHI+L DY
Sbjct: 1   MIEVIVNDRLGKKLRVKCLSTDSVGDLKKVLAVQLGTAHGKVALHKGGVNLKDHISLDDY 60

Query: 319 EIHDGMGLELYY 284
           E+HDG  LELYY
Sbjct: 61  EVHDGTYLELYY 72

>VGLL2_HUMAN (Q8N8G2) Transcription cofactor vestigial-like protein 2 (Vgl-2)|
           (VITO1 protein)
          Length = 317

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
 Frame = -2

Query: 434 HHRRPQE--ARGGADRDQGREDPHPEVVHHLQGPHHPWRLRDPRWDGPRALLQLASSPPA 261
           HH  P    A GGA   Q    P P  VH +  PH      DPR+ GP  L+  AS  PA
Sbjct: 200 HHAHPHHPYALGGALGAQAAPYPRPAAVHEVYAPHF-----DPRY-GP-LLMPAASGRPA 252

Query: 260 MFSHLSLPS 234
             +    P+
Sbjct: 253 RLATAPAPA 261

>GRIP1_RAT (P97879) Glutamate receptor-interacting protein 1 (GRIP1 protein)|
           (AMPA receptor-interacting protein GRIP1)
          Length = 1112

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 20/44 (45%), Positives = 23/44 (52%)
 Frame = -2

Query: 356 HHLQGPHHPWRLRDPRWDGPRALLQLASSPPAMFSHLSLPSMIA 225
           +H   PHHP   R P    P+AL    +SPPAM S  S  SM A
Sbjct: 372 NHHHNPHHPDHCRVPALGFPKAL--TPNSPPAMVSSSSPTSMSA 413

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
            (Trithorax homolog 2)
          Length = 2715

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 262  AGGDEASCSRARGPSHRGSRSRQG*CGPCRWC 357
            +GG  A   R   PSH G + R   CG CR C
Sbjct: 941  SGGTLAHTPRRSLPSHHGKKMRMARCGHCRGC 972

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 12/34 (35%), Positives = 14/34 (41%)
 Frame = -2

Query: 434 HHRRPQEARGGADRDQGREDPHPEVVHHLQGPHH 333
           HH  P+E       +     PHP   HH   PHH
Sbjct: 78  HHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHH 111

>GLCAP_SOYBN (P11827) Beta-conglycinin, alpha' chain precursor|
          Length = 639

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = -2

Query: 482 QRPPGEEGARQVQRGRHHRRPQE--ARGGADRDQGREDPHPEVVHHLQGPHHPWRLRDPR 309
           ++P  EE   Q +    HR+ ++   +G  +    RE P P   H  +   H W+ +  +
Sbjct: 109 RQPHQEEEHEQKEEHEWHRKEEKHGGKGSEEEQDEREHPRPHQPHQKEEEKHEWQHKQEK 168

Query: 308 WDG 300
             G
Sbjct: 169 HQG 171

>CABP3_HUMAN (Q9NZU6) Calcium-binding protein 3 (CaBP3)|
          Length = 192

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = -2

Query: 305 DGPRALLQLASSPPAMFSH-LSLPSMIASVAFQSQCLQSLMCGM 177
           DGP +LL + + PP +  H  +  S ++ +  +S+CL+++  G+
Sbjct: 50  DGPSSLLPVGAQPPYLLQHSFATSSCLSWLLLRSRCLRAVTAGL 93

>ATC3_YEAST (P39524) Probable phospholipid-transporting ATPase DRS2 (EC 3.6.3.1)|
          Length = 1355

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 112  FRLSIIIMGTIMHYLYSSSLEFIPHIKL*RHWDWNAT 222
            F  +I+ +GTI+ Y Y  +L    H +L  HW W  T
Sbjct: 1103 FHSAIVFIGTILIYRYGFALNM--HGELADHWSWGVT 1137

>MDTB_SALTI (Q8Z5F7) Multidrug resistance protein mdtB (Multidrug transporter|
           mdtB)
          Length = 1040

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 4   QLNTAIITIPGYTVYVIYKLHSNSTSDSQVDHRKNMFRLSIIIMGTIMHYL--YSSSLEF 177
           +L TA+ TIPG  +Y+  +   + T D+QV   +  F L    +  + H++    ++L+ 
Sbjct: 643 RLQTAVATIPGVALYL--QPTQDLTIDTQVSRTQYQFTLQATTLDALSHWVPKLQNALQS 700

Query: 178 IPHI 189
           +P +
Sbjct: 701 LPQL 704

>NPAS1_HUMAN (Q99742) Neuronal PAS domain protein 1 (Neuronal PAS1) (Member of|
           PAS protein 5) (MOP5)
          Length = 590

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 27/88 (30%), Positives = 29/88 (32%), Gaps = 13/88 (14%)
 Frame = -2

Query: 482 QRPPGEEGARQVQRGRHHRRPQEARGGADRDQGRED-------PHPEVVHHL------QG 342
           Q  P E  A Q Q  R    P         D G ED       P PE    +      Q 
Sbjct: 447 QAAPAENEAPQTQGKRIKVEPGPRETKGSEDSGDEDPSSHPATPRPEFTSVIRAGVLKQD 506

Query: 341 PHHPWRLRDPRWDGPRALLQLASSPPAM 258
           P  PW L  P  D P  LL     PP +
Sbjct: 507 PVRPWGLAPP-GDPPPTLLHAGFLPPVV 533

>MDTB_SALTY (Q8ZNQ2) Multidrug resistance protein mdtB (Multidrug transporter|
           mdtB)
          Length = 1040

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
 Frame = +1

Query: 4   QLNTAIITIPGYTVYVIYKLHSNSTSDSQVDHRKNMFRLSIIIMGTIMHYL--YSSSLEF 177
           +L TA+ TIPG  +Y+  +   + T D+QV   +  F L    +  + H++    ++L+ 
Sbjct: 643 RLQTAVATIPGVELYL--QPTQDLTIDTQVSRTQYQFTLQATTLDALSHWVPKLQNALQS 700

Query: 178 IPHI 189
           +P +
Sbjct: 701 LPQL 704

>EXTN3_ARATH (Q9FS16) Extensin-3 precursor (AtExt3) (AtExt5)|
          Length = 427

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 380 EDPHPEVVHHLQGPHHPWRLRDP 312
           + P P  VHH   PHHP+  + P
Sbjct: 399 KSPPPPPVHHYSPPHHPYLYKSP 421

>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)|
          Length = 1287

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
 Frame = -2

Query: 389  QGREDPHPEVVHHLQGPHHPWRLRDPR-----WDGPRALLQLASSPPA 261
            + R DP P V    Q    PW  R P      W  P  LL   ++PPA
Sbjct: 1194 RSRSDPGPPVPRLPQKQRAPWGPRTPHRVPGPWGPPEPLLLYRAAPPA 1241

>ENO_MYCH2 (Q601S2) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 452

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -3

Query: 445 NEDDTIGDLKKLVAA---QTGTRAEKIRIQKWYTIYKDHITLGDYEIHDGMGLELYYN 281
           +ED TI DL   V++   +TG+ +   RI K+  +      L  Y   D +G E++YN
Sbjct: 392 SEDTTIADLAVAVSSGQIKTGSLSRTDRIAKYNRLLVIEEYLNSYAKADYIGREVFYN 449

>DNB2_ADE04 (P06500) Early E2A DNA-binding protein|
          Length = 512

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -2

Query: 461 GARQVQRGRHHRRPQEARGGADRDQGREDPHP 366
           G  Q++R R  R P   RG A    GRE P P
Sbjct: 5   GGSQLER-RRERTPDRGRGSASHPPGRESPSP 35

>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -2

Query: 485 AQRPPGEEGARQVQRGRHHRRPQEARGG---ADRDQGRE 378
           A+R  G E  R+V+R R  R  +  RG    A+R +GRE
Sbjct: 68  AERQRGRERGREVERHRRGREAERQRGREREAERQRGRE 106


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,120,230
Number of Sequences: 219361
Number of extensions: 1545858
Number of successful extensions: 4944
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4934
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)