| Clone Name | rbasd17e05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051G22, full insert sequence Length = 1488 Score = 422 bits (213), Expect = e-115 Identities = 356/401 (88%), Gaps = 2/401 (0%) Strand = Plus / Minus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 1237 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 1178 Query: 282 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 341 ||||||||||||| || ||||||||||| |||||||| |||||||||| |||||| ||| Sbjct: 1177 taacctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttca 1118 Query: 342 cagtagtctcccattgcacaggagaggttaccttgttgtgccaagatcttcttgattgtg 401 | ||| |||||||||||||||| || ||||||| || | ||||| ||||||||||||||| Sbjct: 1117 cggtactctcccattgcacaggggaagttacct-gtcgcgccaaaatcttcttgattgtg 1059 Query: 402 tcaggatctgagtggggctgtgcatcaacattggagattactgggattctcggtgatcta 461 ||||||||||||||||| |||||| ||||||||||| ||||||||||| |||| | | Sbjct: 1058 tcaggatctgagtggggtgatgcatccacattggagataactgggattcttggtgttttt 999 Query: 462 atctcggtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagccttgt 521 ||||| || |||| || ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 998 atctctgtctcagctaatgcagattccaatcttgaaacagcaggttgcatgaagc-ttgt 940 Query: 522 gtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgcttt 581 |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 939 atggaaagcaccagcaacagctaggcgcaccgtcattctggccttaaaggactttgcttt 880 Query: 582 ggcttcaactgcttcaatacccttcacaccaccagaaactg 622 |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 879 ggcttcgactgcttcaatccccttcacaccaccagaaactg 839
>dbj|AK061403.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H10, full insert sequence Length = 1430 Score = 422 bits (213), Expect = e-115 Identities = 356/401 (88%), Gaps = 2/401 (0%) Strand = Plus / Minus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 1217 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 1158 Query: 282 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 341 ||||||||||||| || ||||||||||| |||||||| |||||||||| |||||| ||| Sbjct: 1157 taacctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttca 1098 Query: 342 cagtagtctcccattgcacaggagaggttaccttgttgtgccaagatcttcttgattgtg 401 | ||| |||||||||||||||| || ||||||| || | ||||| ||||||||||||||| Sbjct: 1097 cggtactctcccattgcacaggggaagttacct-gtcgcgccaaaatcttcttgattgtg 1039 Query: 402 tcaggatctgagtggggctgtgcatcaacattggagattactgggattctcggtgatcta 461 ||||||||||||||||| |||||| ||||||||||| ||||||||||| |||| | | Sbjct: 1038 tcaggatctgagtggggtgatgcatccacattggagataactgggattcttggtgttttt 979 Query: 462 atctcggtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagccttgt 521 ||||| || |||| || ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 978 atctctgtctcagctaatgcagattccaatcttgaaacagcaggttgcatgaagc-ttgt 920 Query: 522 gtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgcttt 581 |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 919 atggaaagcaccagcaacagctaggcgcaccgtcattctggccttaaaggactttgcttt 860 Query: 582 ggcttcaactgcttcaatacccttcacaccaccagaaactg 622 |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 859 ggcttcgactgcttcaatccccttcacaccaccagaaactg 819
>dbj|AK060653.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H08, full insert sequence Length = 1369 Score = 422 bits (213), Expect = e-115 Identities = 356/401 (88%), Gaps = 2/401 (0%) Strand = Plus / Minus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 1222 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 1163 Query: 282 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 341 ||||||||||||| || ||||||||||| |||||||| |||||||||| |||||| ||| Sbjct: 1162 taacctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttca 1103 Query: 342 cagtagtctcccattgcacaggagaggttaccttgttgtgccaagatcttcttgattgtg 401 | ||| |||||||||||||||| || ||||||| || | ||||| ||||||||||||||| Sbjct: 1102 cggtactctcccattgcacaggggaagttacct-gtcgcgccaaaatcttcttgattgtg 1044 Query: 402 tcaggatctgagtggggctgtgcatcaacattggagattactgggattctcggtgatcta 461 ||||||||||||||||| |||||| ||||||||||| ||||||||||| |||| | | Sbjct: 1043 tcaggatctgagtggggtgatgcatccacattggagataactgggattcttggtgttttt 984 Query: 462 atctcggtagcagccaacgcagattccaatcttgagacagcaggttgcatgaagccttgt 521 ||||| || |||| || ||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 983 atctctgtctcagctaatgcagattccaatcttgaaacagcaggttgcatgaagc-ttgt 925 Query: 522 gtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgcttt 581 |||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 924 atggaaagcaccagcaacagctaggcgcaccgtcattctggccttaaaggactttgcttt 865 Query: 582 ggcttcaactgcttcaatacccttcacaccaccagaaactg 622 |||||| ||||||||||| |||||||||||||||||||||| Sbjct: 864 ggcttcgactgcttcaatccccttcacaccaccagaaactg 824
>gb|AY107543.1| Zea mays PCO095765 mRNA sequence Length = 759 Score = 369 bits (186), Expect = 7e-99 Identities = 341/390 (87%), Gaps = 2/390 (0%) Strand = Plus / Minus Query: 233 atgttctcgatgctggcacctttgttgatccgtttaatgattcctgctataacctttcca 292 |||||||| ||||| | ||||||||||||| || | || |||||||||||||||||| Sbjct: 496 atgttctcaatgctagtgcctttgttgatcctcttgagaatacctgctataacctttcca 437 Query: 293 ggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcacagtagtctcc 352 |||||||||||||| || |||||||| || || |||| |||| || | ||||| || ||| Sbjct: 436 ggtccgagttcataacttttctcaagccccttgcccataagattcttaacagtggtttcc 377 Query: 353 cattgcacaggagaggttaccttgttgtgccaagatcttcttgattgtgtcaggatctga 412 |||||||| ||||||||||||| | || || || |||| |||||| |||| ||||||||| Sbjct: 376 cattgcaccggagaggttacct-gctgagctaaaatctgcttgatggtgttaggatctga 318 Query: 413 gtggggctgtgcatcaacattggagattactgggattctcggtgatctaatctcggtagc 472 ||||||||| ||||||||||||||||| || || ||||| |||| ||||||||| || || Sbjct: 317 gtggggctgcgcatcaacattggagatgaccggaattctaggtgttctaatctcagtggc 258 Query: 473 agccaacgcagattccaatcttgagacagcaggttgcatgaagccttgtgtggaaagcac 532 |||||||||||||||||||||||| ||||| |||||||||||| || || |||||||| | Sbjct: 257 agccaacgcagattccaatcttgaaacagctggttgcatgaag-ctagtatggaaagcgc 199 Query: 533 cagcaacagctaggcgaaccgtcattctggccttgaaagactttgctttggcttcaactg 592 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 198 cagcaacagctaggcgaaccgtcattctggccttgaaggactttgctttggcttcgacta 139 Query: 593 cttcaatacccttcacaccaccagaaactg 622 |||||||||| || |||||||||||||||| Sbjct: 138 cttcaataccttttacaccaccagaaactg 109
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 182 bits (92), Expect = 9e-43 Identities = 150/168 (89%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 381 gccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagatt 440 ||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 10373414 gccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccacattggagata 10373473 Query: 441 actgggattctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagaca 500 ||||||||||| |||| | | ||||| || |||| || ||||||||||||||||| ||| Sbjct: 10373474 actgggattcttggtgtttttatctctgtctcagctaatgcagattccaatcttgaaaca 10373533 Query: 501 gcaggttgcatgaagccttgtgtggaaagcaccagcaacagctaggcg 548 ||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 10373534 gcaggttgcatgaag-cttgtatggaaagcaccagcaacagctaggcg 10373580 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 549 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 608 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 10373937 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 10373996 Query: 609 accaccagaaactg 622 |||||||||||||| Sbjct: 10373997 accaccagaaactg 10374010 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 284 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 343 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 10373214 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 10373273 Query: 344 gtagtctcccattgcacaggagaggttacct 374 ||| |||||||||||||||| || ||||||| Sbjct: 10373274 gtactctcccattgcacaggggaagttacct 10373304 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 10373030 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 10373089 Query: 282 taacct 287 |||||| Sbjct: 10373090 taacct 10373095
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10, complete sequence Length = 139714 Score = 182 bits (92), Expect = 9e-43 Identities = 150/168 (89%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 381 gccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagatt 440 ||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 29967 gccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccacattggagata 30026 Query: 441 actgggattctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagaca 500 ||||||||||| |||| | | ||||| || |||| || ||||||||||||||||| ||| Sbjct: 30027 actgggattcttggtgtttttatctctgtctcagctaatgcagattccaatcttgaaaca 30086 Query: 501 gcaggttgcatgaagccttgtgtggaaagcaccagcaacagctaggcg 548 ||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 30087 gcaggttgcatgaag-cttgtatggaaagcaccagcaacagctaggcg 30133 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 549 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 608 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 30490 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 30549 Query: 609 accaccagaaactg 622 |||||||||||||| Sbjct: 30550 accaccagaaactg 30563 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 284 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 343 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 29767 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 29826 Query: 344 gtagtctcccattgcacaggagaggttacct 374 ||| |||||||||||||||| || ||||||| Sbjct: 29827 gtactctcccattgcacaggggaagttacct 29857 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 29583 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 29642 Query: 282 taacct 287 |||||| Sbjct: 29643 taacct 29648
>gb|AC118670.2| Genomic sequence for Oryza sativa, Nipponbare stain, clone OSJNBb0036D03, from chromosome 3, complete sequence Length = 125800 Score = 182 bits (92), Expect = 9e-43 Identities = 150/168 (89%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 381 gccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagatt 440 ||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 86880 gccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccacattggagata 86939 Query: 441 actgggattctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagaca 500 ||||||||||| |||| | | ||||| || |||| || ||||||||||||||||| ||| Sbjct: 86940 actgggattcttggtgtttttatctctgtctcagctaatgcagattccaatcttgaaaca 86999 Query: 501 gcaggttgcatgaagccttgtgtggaaagcaccagcaacagctaggcg 548 ||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 87000 gcaggttgcatgaag-cttgtatggaaagcaccagcaacagctaggcg 87046 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 549 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 608 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 87403 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 87462 Query: 609 accaccagaaactg 622 |||||||||||||| Sbjct: 87463 accaccagaaactg 87476 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 284 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 343 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 86680 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 86739 Query: 344 gtagtctcccattgcacaggagaggttacct 374 ||| |||||||||||||||| || ||||||| Sbjct: 86740 gtactctcccattgcacaggggaagttacct 86770 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 86496 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 86555 Query: 282 taacct 287 |||||| Sbjct: 86556 taacct 86561
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 182 bits (92), Expect = 9e-43 Identities = 150/168 (89%), Gaps = 1/168 (0%) Strand = Plus / Plus Query: 381 gccaagatcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagatt 440 ||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 10371515 gccaaaatcttcttgattgtgtcaggatctgagtggggtgatgcatccacattggagata 10371574 Query: 441 actgggattctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagaca 500 ||||||||||| |||| | | ||||| || |||| || ||||||||||||||||| ||| Sbjct: 10371575 actgggattcttggtgtttttatctctgtctcagctaatgcagattccaatcttgaaaca 10371634 Query: 501 gcaggttgcatgaagccttgtgtggaaagcaccagcaacagctaggcg 548 ||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 10371635 gcaggttgcatgaag-cttgtatggaaagcaccagcaacagctaggcg 10371681 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 549 aaccgtcattctggccttgaaagactttgctttggcttcaactgcttcaatacccttcac 608 |||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||||| Sbjct: 10372038 aaccgtcattctggccttaaaggactttgctttggcttcgactgcttcaatccccttcac 10372097 Query: 609 accaccagaaactg 622 |||||||||||||| Sbjct: 10372098 accaccagaaactg 10372111 Score = 93.7 bits (47), Expect = 7e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 284 acctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtcaca 343 ||||||||||| || ||||||||||| |||||||| |||||||||| |||||| |||| Sbjct: 10371315 acctttccaggaccaagttcatagcttttctcaagtcctttacccatcagagtcttcacg 10371374 Query: 344 gtagtctcccattgcacaggagaggttacct 374 ||| |||||||||||||||| || ||||||| Sbjct: 10371375 gtactctcccattgcacaggggaagttacct 10371405 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 222 ctcatgcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgcta 281 ||||||||||||||||||| ||||| || ||||||| |||| ||||| |||||||||| Sbjct: 10371131 ctcatgcaccaatgttctcaatgcttgcgcctttgtcaatccttttaagaattcctgcta 10371190 Query: 282 taacct 287 |||||| Sbjct: 10371191 taacct 10371196
>gb|DQ278438.1| Glycine max malonyltransferase (MT2) mRNA, complete cds Length = 1387 Score = 145 bits (73), Expect = 2e-31 Identities = 255/313 (81%), Gaps = 2/313 (0%) Strand = Plus / Minus Query: 271 gattcctgctataacctttccaggtccgagttcatagctcttctcaaggcctttacccaa 330 |||||| || ||||||||||| ||||| ||||||||||| |||| || || || | Sbjct: 1081 gattccagcaataacctttccgggtcccagttcatagcttttcttcagacccttggttag 1022 Query: 331 aagagtcgtcacagtagtctcccattgcacaggagaggttaccttgttgtgccaagatct 390 ||||||| |||| || || |||||||| ||||| || || |||| | ||||||| |||| Sbjct: 1021 aagagtcttcactgttgtttcccattgaacaggtgaagtaacctggc-gtgccaatatct 963 Query: 391 tcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactgggattc 450 |||| ||||||| |||||||| || |||||||||| ||||||||||| ||||| |||| Sbjct: 962 tctttattgtgttaggatctgtatgtggctgtgcattcacattggagatgactggtattc 903 Query: 451 tcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggttgca 510 | || | ||| || || || | ||||| || | |||||||||||| ||||| |||| || Sbjct: 902 ttggggttctgatttctgttgttgccaatgctgcttccaatcttgacacagctggttcca 843 Query: 511 tgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaa 570 | || | | ||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 842 taaaac-tagtgtggaaagcaccagcaacagctaggcgcaccgtcattcgagccttgaaa 784 Query: 571 gactttgctttgg 583 |||||||| |||| Sbjct: 783 gactttgccttgg 771
>emb|AJ007046.1|BNA7046 Brassica napus mRNA for acyl-carrier protein] S-malonyltransferase, partial Length = 1049 Score = 143 bits (72), Expect = 8e-31 Identities = 172/204 (84%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||||||||| ||||||| || ||||||||||| ||||||||||| |||||| Sbjct: 895 atcttcttgattgtgtctggatctgcatgaggctgtgcatccacattggagatcactggg 836 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || || || ||| ||||| || | ||||| |||| ||| ||||| || || || ||| Sbjct: 835 atccttggacttctgatctccgtttccgccaatgcagcttctaatctagacactgctggt 776 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| ||||||||||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 775 tccatgaa-acttgtgtggaaagcacccgcaacagctagccgaaccgtcattcgagcctt 717 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 716 gaatgacttagctttggcttcaac 693
>emb|BX819770.1|CNS0A9DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 135 bits (68), Expect = 2e-28 Identities = 171/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1025 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 966 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| ||||| ||||| |||| ||| ||||| ||||| || ||| Sbjct: 965 atcctcggacttctgatctctgtagctgccaatgcagcttctaatctcgagactgctggt 906 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| || |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 905 tccatgaa-actagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 847 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 846 gaatgacttagctttggcttcaac 823
>ref|NM_201835.2| Arabidopsis thaliana transferase AT2G30200 transcript variant AT2G30200.2 mRNA, complete cds Length = 1652 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1305 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 1246 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 1245 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 1186 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 1185 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 1127 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 1126 gaatgacttagctttggcttcaac 1103
>ref|NM_128573.1| Arabidopsis thaliana [acyl-carrier protein] S-malonyltransferase/ transferase AT2G30200 transcript variant AT2G30200.1 mRNA, complete cds Length = 1435 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1070 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 1011 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 1010 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 951 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 950 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 892 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 891 gaatgacttagctttggcttcaac 868
>gb|AY735592.1| Arabidopsis thaliana hypothetical protein AT2G30200 mRNA, complete cds Length = 1344 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1037 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 978 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 977 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 918 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 917 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 859 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 858 gaatgacttagctttggcttcaac 835
>gb|AY122949.1| Arabidopsis thaliana putative malonyl-CoA (At2g30200) mRNA, complete cds Length = 1213 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1019 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 960 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 959 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 900 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 899 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 841 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 840 gaatgacttagctttggcttcaac 817
>gb|AY091077.1| Arabidopsis thaliana putative malonyl-CoA:Acyl carrier protein transacylase (At2g30200) mRNA, complete cds Length = 1428 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1069 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 1010 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 1009 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 950 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 949 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 891 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 890 gaatgacttagctttggcttcaac 867
>emb|BX821339.1|CNS0A99X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1357 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1056 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 997 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 996 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 937 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 936 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 878 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 877 gaatgacttagctttggcttcaac 854
>emb|BX820752.1|CNS0A81Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1007 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 948 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 947 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 888 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 887 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 829 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 828 gaatgacttagctttggcttcaac 805
>gb|AY086952.1| Arabidopsis thaliana clone 299 mRNA, complete sequence Length = 1436 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1070 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 1011 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 1010 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 951 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 950 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 892 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 891 gaatgacttagctttggcttcaac 868
>gb|AY924753.1| Arabidopsis thaliana hypothetical protein (At2g30200) mRNA, complete cds Length = 1182 Score = 127 bits (64), Expect = 5e-26 Identities = 170/204 (83%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1019 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 960 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 959 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 900 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 899 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 841 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 840 gaatgacttagctttggcttcaac 817
>emb|BX820581.1|CNS0A9LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 119 bits (60), Expect = 1e-23 Identities = 169/204 (82%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || |||||| |||| ||||| ||||| |||||| Sbjct: 1038 atcttcttgatcgtgtctggatctgcatgaggctgttcatcgacattcgagatcactggg 979 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 978 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 919 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| ||||||||||| || |||||||||| || || Sbjct: 918 tccatgaaac-tagtgtggaaagcacctgcaacagctagacgcaccgtcattcgtgcttt 860 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 859 gaatgacttagctttggcttcaac 836
>emb|BX820262.1|CNS0A9J5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1310 Score = 111 bits (56), Expect = 3e-21 Identities = 168/204 (82%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || |||||| |||| ||||| ||||| |||||| Sbjct: 1010 atcttcttgatcgtgtctggatctgcatgaggctgtacatcgacattcgagatcactggg 951 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| ||||| ||||| |||| ||| ||||| ||||| || ||| Sbjct: 950 atcctcggacttctgatctctgtagctgccaatgcagcttctaatctcgagactgctggt 891 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||| || || || ||||||||||| |||||||||| || |||||||||| || || Sbjct: 890 tccatg-agactagtatggaaagcaccttcaacagctagacgcaccgtcattcgtgcttt 832 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 831 gaatgacttagctttggcttcaac 808
>emb|BX820991.1|CNS0A9LT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 103 bits (52), Expect = 7e-19 Identities = 167/204 (81%), Gaps = 1/204 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| | |||||||||| ||||| ||||| |||||| Sbjct: 978 atcttcttgatcgtgtctggatctgcattttgctgtgcatcgacattcgagatcactggg 919 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 918 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 859 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggcctt 566 | |||||| | | |||||||||||||| |||||||| || || |||||||||| || || Sbjct: 858 tccatgaaac-tagtgtggaaagcacctgcaacagcgagacgcaccgtcattcgtgcttt 800 Query: 567 gaaagactttgctttggcttcaac 590 ||| ||||| |||||||||||||| Sbjct: 799 gaatgacttagctttggcttcaac 776
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete sequence Length = 83796 Score = 93.7 bits (47), Expect = 7e-16 Identities = 132/159 (83%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 22142 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 22083 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| ||| ||||| ||||| || ||| Sbjct: 22082 atcctcggacttctgatctctgtggctgccaatgcagcttctaatctcgagactgctggt 22023 Query: 507 tgcatgaagccttgtgtggaaagcaccagcaacagctag 545 | |||||| || |||||||||||||| ||||||||||| Sbjct: 22022 tccatgaa-actagtgtggaaagcacctgcaacagctag 21985 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 550 accgtcattctggccttgaaagactttgctttggcttcaac 590 |||||||||| || ||||| ||||| |||||||||||||| Sbjct: 21895 accgtcattcgtgctttgaatgacttagctttggcttcaac 21855
>gb|AF210698.1|AF210698 Perilla frutescens malonyl-CoA:ACP transacylase (MCT) mRNA, complete cds Length = 1367 Score = 73.8 bits (37), Expect = 6e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 519 tgtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaaagactttgc 578 |||||||||||| ||||| ||||||| || |||||||||| |||||||| || ||||| Sbjct: 842 tgtgtggaaagctccagctacagctaaccggaccgtcattcgagccttgaatgattttgc 783 Query: 579 tttggcttcaactgcttcaat 599 || ||||||||||||||||| Sbjct: 782 ctttgcttcaactgcttcaat 762 Score = 44.1 bits (22), Expect = 0.55 Identities = 70/86 (81%) Strand = Plus / Minus Query: 227 gcaccaatgttctcgatgctggcacctttgttgatccgtttaatgattcctgctataacc 286 ||||| ||||||||||| |||||||||| |||| ||| | ||||| ||||| ||| Sbjct: 1132 gcaccgatgttctcgatcgcagcacctttgtccatccttttcacaattcccgctatgacc 1073 Query: 287 tttccaggtccgagttcatagctctt 312 ||||||||||| | |||||| ||||| Sbjct: 1072 tttccaggtcccaattcataactctt 1047
>emb|BX820473.1|CNS0A9OH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 65.9 bits (33), Expect = 1e-07 Identities = 137/169 (81%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 387 atcttcttgattgtgtcaggatctgagtggggctgtgcatcaacattggagattactggg 446 ||||||||||| ||||| ||||||| || ||||||||||| ||||| ||||| |||||| Sbjct: 1029 atcttcttgatcgtgtctggatctgcatgaggctgtgcatcgacattcgagatcactggg 970 Query: 447 attctcggtgatctaatctcggtagcagccaacgcagattccaatcttgagacagcaggt 506 || ||||| ||| ||||| || || ||||| |||| | ||||| ||||| || ||| Sbjct: 969 atcctcggacttctgatctctgtggctgccaatgcagctaaaaatctcgagactgctggt 910 Query: 507 tgcatgaagccttgtgtgg-aaagcaccagcaacagctaggcgaaccgt 554 | |||||| || |||||| |||||||| ||||||||||| || ||||| Sbjct: 909 tccatgaa-actagtgtggcaaagcacctgcaacagctagacgcaccgt 862
>emb|AJ430374.1|SLA430374 Silene latifolia partial mRNA from Men-524 gene Length = 285 Score = 61.9 bits (31), Expect = 2e-06 Identities = 151/187 (80%), Gaps = 3/187 (1%) Strand = Plus / Minus Query: 223 tcatgcaccaatgttctcgat-gctggcacctttgttgatccgtttaatgattcctgcta 281 |||||||| |||||||||||| |||| || |||||| ||| | || ||||| || || | Sbjct: 198 tcatgcactaatgttctcgattgctg-cagctttgtcgattctcttcatgatccccgcaa 140 Query: 282 taacctttccaggtccgagttcatagctcttctcaaggcctttacccaaaagagtcgtca 341 | |||||||||||||| | |||||||||||||| | ||||| || ||||||| ||| Sbjct: 139 ttacctttccaggtcccaattcatagctcttcttcaatcctttgttcagaagagtcttca 80 Query: 342 cagtagtctcccattgcacaggagaggttaccttgttgtgccaagatcttcttgattgtg 401 || |||||||||||||||||||| || ||| ||| | |||| |||||||| || ||| Sbjct: 79 gtgttgtctcccattgcacaggagaagtcacc-tgtcgagccagtatcttcttaatggtg 21 Query: 402 tcaggat 408 ||||||| Sbjct: 20 tcaggat 14
>emb|BX820825.1|CNS0A9IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 54.0 bits (27), Expect = 6e-04 Identities = 140/175 (80%), Gaps = 2/175 (1%) Strand = Plus / Minus Query: 417 ggctgtgcatcaacattggagattactgggattctcggtgatctaatctcggtagcagcc 476 ||||||||||| ||||| ||||| |||||||| ||||| ||| ||||| || | ||| Sbjct: 1008 ggctgtgcatcgacattcgagatcactgggatcctcggacttctgatctctgtggttgcc 949 Query: 477 aacgcagattccaatcttgagacagcaggttgcatgaagccttgtgtggaaagcaccagc 536 || |||| ||| ||||| ||||| || |||| |||||| || ||||||| || ||| | Sbjct: 948 aatgcagcttctaatctcgagactgctggttccatgaa-actagtgtggatagtaccttc 890 Query: 537 aacagctaggcgaaccgtcattctggccttgaaagactttg-ctttggcttcaac 590 ||||||||| | |||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 889 aacagctagatgcaccgtcattcgtgctttgaatgacttagtctttggcttcaac 835
>gb|AY254314.1| Hemiselmis virescens malonyl-CoA:ACP transacylase (fabD) gene, partial cds; nuclear gene for plastid product Length = 688 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 520 gtgtggaaagcaccagcaacagctaggcgaaccgtcattctggccttgaa 569 ||||||||||||||||| ||||| ||| | |||||||| | ||||||||| Sbjct: 591 gtgtggaaagcaccagccacagcgagggggaccgtcatgcgggccttgaa 542
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 584 cttcaactgcttcaatacccttcacaccaccagaaac 620 |||||||| ||||||||||||||||| ||||| |||| Sbjct: 139060 cttcaacttcttcaatacccttcacatcaccacaaac 139096
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 584 cttcaactgcttcaatacccttcacaccaccagaaac 620 |||||||| ||||||||||||||||| ||||| |||| Sbjct: 13455597 cttcaacttcttcaatacccttcacatcaccacaaac 13455633
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 gcttcaatacccttcacaccaccagaaactg 622 |||||||| ||||||||||||| |||||||| Sbjct: 13023230 gcttcaatccccttcacaccactagaaactg 13023200
>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0688H12 Length = 139279 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 592 gcttcaatacccttcacaccaccagaaactg 622 |||||||| ||||||||||||| |||||||| Sbjct: 132873 gcttcaatccccttcacaccactagaaactg 132843
>gb|AC007621.34| Homo sapiens 12 BAC RP11-757G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144000 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggctt 586 ||||||| ||||||||||||||||||| Sbjct: 119200 tggcctttaaagactttgctttggctt 119174
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 579 tttggcttcaactgcttcaata 600 |||||||||||||||||||||| Sbjct: 6316571 tttggcttcaactgcttcaata 6316592
>gb|AC017048.6| Homo sapiens BAC clone RP11-324L17 from 2, complete sequence Length = 186373 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 agtctcccattgcacaggagag 367 |||||||||||||||||||||| Sbjct: 60687 agtctcccattgcacaggagag 60666
>ref|XM_521892.1| PREDICTED: Pan troglodytes similar to Rpl23a protein (LOC466493), mRNA Length = 471 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 73 tggcctttaaagcctttgctttggcttca 45
>ref|XM_583734.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC507168), mRNA Length = 508 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 73 tggccttcaaagcctttgctttggcttca 45
>ref|XM_864088.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC507168), mRNA Length = 538 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 73 tggccttcaaagcctttgctttggcttca 45
>ref|XM_871857.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC516176), mRNA Length = 533 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 90 tggccttcaaagcctttgctttggcttca 62
>ref|XM_871768.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC516176), mRNA Length = 538 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 90 tggccttcaaagcctttgctttggcttca 62
>ref|XM_594319.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC516176), mRNA Length = 541 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 78 tggccttcaaagcctttgctttggcttca 50
>ref|XM_863859.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC516176), mRNA Length = 553 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 90 tggccttcaaagcctttgctttggcttca 62
>ref|XM_873448.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC614643), mRNA Length = 544 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 83 tggccttcaaagcctttgctttggcttca 55
>ref|XM_864494.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC614643), mRNA Length = 531 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 83 tggccttcaaagcctttgctttggcttca 55
>ref|XM_873326.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 5 (LOC511712), mRNA Length = 532 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_873228.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC511712), mRNA Length = 529 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_873124.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC511712), mRNA Length = 529 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_873022.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC511712), mRNA Length = 524 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_589100.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC511712), mRNA Length = 559 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_878778.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC615028), mRNA Length = 531 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_878746.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC615028), mRNA Length = 531 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_878716.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC615028), mRNA Length = 542 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 77 tggccttcaaagcctttgctttggcttca 49
>ref|XM_866556.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC615028), mRNA Length = 554 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 89 tggccttcaaagcctttgctttggcttca 61
>ref|XM_882175.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC615608), mRNA Length = 710 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 80 tggccttcaaagcctttgctttggcttca 52
>ref|XM_868968.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2 (LOC615608), mRNA Length = 530 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 88 tggccttcaaagcctttgctttggcttca 60
>ref|XM_874719.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 4 (LOC514181), mRNA Length = 523 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_874636.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 3 (LOC514181), mRNA Length = 530 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_591988.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a, transcript variant 1 (LOC514181), mRNA Length = 546 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_603720.2| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a (LOC525367), mRNA Length = 537 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 82 tggccttcaaagcctttgctttggcttca 54
>ref|XM_868944.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a (LOC616830), mRNA Length = 545 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 84 tggccttcaaagcctttgctttggcttca 56
>ref|XM_867538.1| PREDICTED: Bos taurus similar to 60S ribosomal protein L23a (LOC615671), mRNA Length = 487 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 73 tggccttcaaagcctttgctttggcttca 45
>gb|BC114200.1| Bos taurus similar to 60S ribosomal protein L23a, transcript variant 2, mRNA (cDNA clone MGC:140350 IMAGE:8187616), complete cds Length = 615 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 86 tggccttcaaagcctttgctttggcttca 58
>emb|AL390140.1|HSM802785 Homo sapiens genomic DNA; cDNA DKFZp547I014 (from clone DKFZp547I014) Length = 2302 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 1847 tggcctttaaagcctttgctttggcttca 1819
>gb|AC004034.2| Homo sapiens chromosome 16 clone LA16c-321D4, complete sequence Length = 37718 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 24384 tggcctttaaagcctttgctttggcttca 24356
>ref|NR_002229.1| Homo sapiens ribosomal protein L23a pseudogene 13 (RPL23AP13) on chromosome 2 Length = 2302 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 1847 tggcctttaaagcctttgctttggcttca 1819
>gb|AC011811.42| Homo sapiens clone b250a12, complete sequence Length = 231739 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 178099 tggccttcaaagcctttgctttggcttca 178127
>gb|AC104634.5| Homo sapiens BAC clone RP11-793L24 from 2, complete sequence Length = 115758 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 27581 tggccttcaaagcctttgctttggcttca 27553
>gb|AF043642.1|AF043642 Rattus norvegicus matrin cyclophilin (matrin-cyp) mRNA, complete cds Length = 3964 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacattg 434 ||||||||||||||||||||| Sbjct: 1137 tggggctgtgcatcaacattg 1117
>gb|AC092839.4| Homo sapiens BAC clone RP11-257N16 from 2, complete sequence Length = 186464 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 151912 tggcctttaaagcctttgctttggcttca 151884
>gb|AC068205.25| Homo sapiens chromosome 11, clone RP11-472I20, complete sequence Length = 205069 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 144220 tggcctttaaagcctttgctttggcttca 144192
>ref|XM_579532.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_031793 (LOC497773), mRNA Length = 3926 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacattg 434 ||||||||||||||||||||| Sbjct: 1143 tggggctgtgcatcaacattg 1123
>gb|BC085723.1| Rattus norvegicus peptidylprolyl isomerase G, mRNA (cDNA clone MGC:93333 IMAGE:7123868), complete cds Length = 2892 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacattg 434 ||||||||||||||||||||| Sbjct: 1183 tggggctgtgcatcaacattg 1163
>emb|BX469913.15| Zebrafish DNA sequence from clone DKEY-237G5 in linkage group 20, complete sequence Length = 196927 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 gtacattcaggacagttgctt 161 ||||||||||||||||||||| Sbjct: 106974 gtacattcaggacagttgctt 106994
>gb|BC096740.1| Homo sapiens ribosomal protein L23a pseudogene 13, mRNA (cDNA clone MGC:120121 IMAGE:40021995), complete cds Length = 565 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 197 tggcctttaaagcctttgctttggcttca 169
>gb|BC098172.1| Homo sapiens ribosomal protein L23a pseudogene 13, mRNA (cDNA clone MGC:120120 IMAGE:40021993), complete cds Length = 565 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 197 tggcctttaaagcctttgctttggcttca 169
>gb|BC096706.1| Homo sapiens ribosomal protein L23a pseudogene 13, mRNA (cDNA clone MGC:120119 IMAGE:40021992), complete cds Length = 565 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttca 588 ||||||| |||| |||||||||||||||| Sbjct: 197 tggcctttaaagcctttgctttggcttca 169
>ref|NM_031793.1| Rattus norvegicus peptidylprolyl isomerase G (Ppig), mRNA Length = 3964 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacattg 434 ||||||||||||||||||||| Sbjct: 1137 tggggctgtgcatcaacattg 1117
>dbj|AB084472.1| Triakis scyllium mRNA for beta actin, complete cds Length = 1703 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 299 agttcatagctcttctcaagg 319 ||||||||||||||||||||| Sbjct: 814 agttcatagctcttctcaagg 794
>gb|AC150414.2| Branchiostoma floridae clone CH302-62C22, complete sequence Length = 210179 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 572 actttgctttggcttcaact 591 |||||||||||||||||||| Sbjct: 36765 actttgctttggcttcaact 36784
>ref|XM_531549.1| PREDICTED: Pan troglodytes similar to ribosomal protein L23a; 60S ribosomal protein L23a; cDNA sequence BC029892 (LOC474101), mRNA Length = 483 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 88 tggcctttaaagcctttgctttggcttc 61
>ref|XM_508278.1| PREDICTED: Pan troglodytes similar to Rpl23a protein (LOC451018), mRNA Length = 417 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 |||||||||||| ||| ||||||||||| Sbjct: 73 tggccttgaaagccttcgctttggcttc 46
>gb|AC118932.7| Mus musculus chromosome 5, clone RP24-147H20, complete sequence Length = 168156 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gagttcatagctcttctcaa 317 |||||||||||||||||||| Sbjct: 103631 gagttcatagctcttctcaa 103612
>gb|BC038818.1| Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), mRNA (cDNA clone IMAGE:3708584), containing frame-shift errors Length = 1389 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 977 tggggctgtgcatcaacatt 958
>gb|BC027420.1| Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), mRNA (cDNA clone IMAGE:3978847), containing frame-shift errors Length = 1566 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1155 tggggctgtgcatcaacatt 1136
>gb|BC016126.1| Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), mRNA (cDNA clone IMAGE:4910106), containing frame-shift errors Length = 1483 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1023 tggggctgtgcatcaacatt 1004
>gb|AC157928.4| Mus musculus chromosome 5, clone RP24-119I9, complete sequence Length = 157594 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 gagttcatagctcttctcaa 317 |||||||||||||||||||| Sbjct: 2438 gagttcatagctcttctcaa 2419
>gb|BC000596.1| Homo sapiens ribosomal protein L23a pseudogene 7, mRNA (cDNA clone IMAGE:3346366) Length = 969 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 243 tggcctttaaagcctttgctttggcttc 216
>ref|XM_992686.1| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G) (Ppig), mRNA Length = 6176 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1038 tggggctgtgcatcaacatt 1019
>ref|XM_001003390.1| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 7 (Ppig), mRNA Length = 5186 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 70 tggggctgtgcatcaacatt 51
>ref|XM_892000.2| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 2 (Ppig), mRNA Length = 6174 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1038 tggggctgtgcatcaacatt 1019
>ref|XM_130275.8| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 1 (Ppig), mRNA Length = 6297 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1161 tggggctgtgcatcaacatt 1142
>ref|XM_899890.2| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 6 (Ppig), mRNA Length = 6428 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1292 tggggctgtgcatcaacatt 1273
>ref|XM_982163.1| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 14 (Ppig), mRNA Length = 5177 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 70 tggggctgtgcatcaacatt 51
>ref|XM_921266.2| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 12 (Ppig), mRNA Length = 6287 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1160 tggggctgtgcatcaacatt 1141
>ref|XM_909264.2| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 7 (Ppig), mRNA Length = 6164 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1037 tggggctgtgcatcaacatt 1018
>ref|XM_921257.2| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 11 (Ppig), mRNA Length = 6418 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1291 tggggctgtgcatcaacatt 1272
>ref|XM_982127.1| PREDICTED: Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), transcript variant 13 (Ppig), mRNA Length = 6085 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 958 tggggctgtgcatcaacatt 939
>gb|AC006013.3| Homo sapiens PAC clone RP5-945F2 from 7, complete sequence Length = 159002 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 caggacagttgcttaaatct 167 |||||||||||||||||||| Sbjct: 2357 caggacagttgcttaaatct 2338
>emb|AL139288.15| Human DNA sequence from clone RP5-915N17 on chromosome 1q42.11-42.3, complete sequence Length = 151563 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 108817 tggccttcaaagcctttgctttggcttc 108790
>emb|AL157386.14| Human DNA sequence from clone RP11-170J3 on chromosome 10 Contains part of the SUFU gene for suppressor of fused homolog (Drosophila) and a 60S ribosomal protein L23a (RPL23A) pseudogene, complete sequence Length = 72536 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 53039 tggccttcaaagcctttgctttggcttc 53066
>emb|AL669839.13| Mouse DNA sequence from clone RP23-171P1 on chromosome 11 Contains part of the Slit 3 gene for slit homolog 3 (Drosophila), complete sequence Length = 169097 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 tggggctgtgcatcaacattggag 437 |||| ||||||||||||||||||| Sbjct: 18704 tgggcctgtgcatcaacattggag 18727
>dbj|AK134121.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830444H20 product:Similar to matrin cyclophilin (Matrin-cyp) (Fragment), full insert sequence Length = 1624 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1163 tggggctgtgcatcaacatt 1144
>gb|AC021205.6| Homo sapiens BAC clone RP11-170N16 from 4, complete sequence Length = 178917 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cacaatatggagggcaatct 39 |||||||||||||||||||| Sbjct: 37793 cacaatatggagggcaatct 37812
>ref|XM_941512.1| PREDICTED: Homo sapiens similar to 60S ribosomal protein L23a (LOC652167), mRNA Length = 619 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 199 tggcctttaaagcctttgctttggcttc 172
>ref|NR_000029.1| Homo sapiens ribosomal protein L23a pseudogene 7 (RPL23AP7) on chromosome 2 Length = 969 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 243 tggcctttaaagcctttgctttggcttc 216
>gb|BC094926.1| Mus musculus peptidyl-prolyl isomerase G (cyclophilin G), mRNA (cDNA clone IMAGE:6434319), partial cds Length = 1436 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 1015 tggggctgtgcatcaacatt 996
>gb|AC139452.4| Homo sapiens 3 BAC RP11-301L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164897 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||||||| ||||||||||| Sbjct: 147367 tggcctttaaagacttcgctttggcttc 147394
>gb|AC155175.3| Pan troglodytes BAC clone CH251-72L14 from chromosome unknown, complete sequence Length = 171893 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 32281 tggcctttaaagcctttgctttggcttc 32254
>gb|AC157217.2| Pan troglodytes BAC clone CH251-305B5 from chromosome unknown, complete sequence Length = 159245 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 cacaatatggagggcaatct 39 |||||||||||||||||||| Sbjct: 126702 cacaatatggagggcaatct 126683
>gb|AC007272.3| Homo sapiens BAC clone RP11-13J8 from 2, complete sequence Length = 95073 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 42596 tggccttcaaagcctttgctttggcttc 42623
>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete sequences Length = 165662 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 10991 tggcctttaaagcctttgctttggcttc 11018
>emb|AL954224.1|PT270D20 Pan troglodytes chromosome 22 BAC PTB-270D20, complete sequence Length = 192642 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 560 tggccttgaaagactttgctttggcttc 587 ||||||| |||| ||||||||||||||| Sbjct: 65990 tggcctttaaagcctttgctttggcttc 65963
>gb|AC123880.18| Mus musculus chromosome 3, clone RP23-225M12, complete sequence Length = 224562 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ggaaagcaccagcaacagct 543 |||||||||||||||||||| Sbjct: 101693 ggaaagcaccagcaacagct 101712
>emb|AL845261.17| Mouse DNA sequence from clone RP23-174C9 on chromosome 2, complete sequence Length = 182370 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tggggctgtgcatcaacatt 433 |||||||||||||||||||| Sbjct: 60519 tggggctgtgcatcaacatt 60500 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,008,807 Number of Sequences: 3902068 Number of extensions: 5008807 Number of successful extensions: 87935 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87597 Number of HSP's gapped (non-prelim): 308 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)