>XPO6A_XENLA (Q53I77) Exportin-6-A|
          Length = 1135

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 326 QRLTVTIDQTSRVLHCSIKGKEALVPPLTRAARSLTVHMF 445
           QRL VT +   R LHCS++   +L+  + R A      MF
Sbjct: 548 QRLNVTAENDCRRLHCSLRDLSSLLQAVGRLAEYFIGDMF 587

>EGLN2_HUMAN (Q96KS0) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 1) (HIF-prolyl hydroxylase 1)
           (HIF-PH1) (HPH-3) (Prolyl hydroxylase domain-containing
           protein 1) (PHD1) (Estrogen-induced tag 6)
          Length = 407

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = -2

Query: 260 QAPRTDDPSRRWASDAG---VPCSEPWASSVSQ 171
           Q  R + P R+WA D G    P   PWA   +Q
Sbjct: 110 QGARPEAPKRKWAEDGGDAPSPSKRPWARQENQ 142

>EGLN2_MOUSE (Q91YE2) Egl nine homolog 2 (EC 1.14.11.-) (Hypoxia-inducible|
           factor prolyl hydroxylase 1) (HIF-prolyl hydroxylase 1)
           (HIF-PH1) (Falkor)
          Length = 419

 Score = 29.3 bits (64), Expect = 7.6
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = -2

Query: 260 QAPRTDDPSRRWASDAG---VPCSEPWASSVSQ 171
           Q  R + P R+WA D G    P   PWA   +Q
Sbjct: 110 QGARPEAPKRKWAKDGGDAPSPSKRPWARQENQ 142

>UL52_SHV21 (P14346) Helicase/primase complex protein (Probable DNA replication|
           gene 56 protein)
          Length = 835

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 421 TEPDSTYVLTDRLTSTGDHK--HRNLHHCYIY 510
           T+ DS  ++TD LT T  +   +  LH+CYIY
Sbjct: 17  TDGDSAEIITDILTGTDTNAFIYSVLHNCYIY 48

>MCM3A_HUMAN (O60318) 80 kda MCM3-associated protein (GANP protein)|
          Length = 1980

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 196 SEHGTPASDAHRREGSSVLGACSVTDLASMQC 291
           S  GTPA  ++R E +  LG  S +++ ++QC
Sbjct: 408 SLRGTPARQSNRSESTDSLGGLSPSEVTAIQC 439

>Y2248_MYCTU (Q10526) Hypothetical protein Rv2248/MT2308|
          Length = 271

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 27/98 (27%), Positives = 42/98 (42%)
 Frame = +2

Query: 83  GHW*TCSRSAVHISADYVTEETLSCTLRDTVTPTMPTVQNTVHQRLMPTGEKGHRSLAPA 262
           GH   C  +A  +   + TE T++  + D      PTV   VHQR+    ++    LA A
Sbjct: 43  GHAVACLGTAAALYG-FDTENTVAIHMLDPGVRMRPTVGLMVHQRVGARLQRVSGRLATA 101

Query: 263 P*QTLQACNALLTRLRSVSEGQRLTVTIDQTSRVLHCS 376
           P  T       L R R+++       T+D   R + C+
Sbjct: 102 PAWTAVEVARQLRRPRALA-------TLDAALRSMRCA 132

>TRA2_PSEFL (Q51761) Putative transposase for insertion sequence IS1162|
          Length = 558

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 21/72 (29%), Positives = 29/72 (40%)
 Frame = -3

Query: 409 EWWYQCLFSFDAAVQDTARLVDGHGQALPF*HRPEPSKERIACLQGLSRSRRQGPMTLLA 230
           EW  Q L  +   +    R +  H       H+P P     ACL  LS +R+ G   L A
Sbjct: 409 EWTPQRLLDWGERIGPQTRQIVEHQLT----HKPHPEMGYRACLGLLSLARQYGNARLEA 464

Query: 229 GGHQTLVYRVLN 194
              + +  R LN
Sbjct: 465 AASRAVQLRALN 476

>GPHA2_RAT (Q925Q4) Glycoprotein hormone alpha 2 precursor (Thyrostimulin|
           alpha subunit)
          Length = 130

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 16/65 (24%), Positives = 28/65 (43%)
 Frame = +1

Query: 94  NLLAVSSTH*CGLCNGGDAVMHTAGHCDTDDAHGSEHGTPASDAHRREGSSVLGACSVTD 273
           N+   S  H  G C G        GHC++  A  S +    +  +R   +SV   C+++ 
Sbjct: 38  NVTVRSDRH--GTCQGSHVAQACVGHCES-SAFPSRYSVLVASGYRHNITSVSQCCTISS 94

Query: 274 LASMQ 288
           L  ++
Sbjct: 95  LKKVR 99

>SAP_HUMAN (P07602) Proactivator polypeptide precursor [Contains: Saposin A|
           (Protein A); Saposin B-Val; Saposin B (Sphingolipid
           activator protein 1) (SAP-1) (Cerebroside sulfate
           activator) (CSAct) (Dispersin) (Sulfatide/GM1
           activator); Saposin C (Co-beta-
          Length = 524

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 180 RRCPRFRTRYTSV*CPPARRVIGP-WRLLRDRPCKHAMRSLLGSGRCQKGNA*P*PSTKR 356
           ++C +F   Y  V       V+ P +  L+   C  A + LLG+ +C  G +    +T+ 
Sbjct: 449 KQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACPSAHKPLLGTEKCIWGPSYWCQNTET 508

Query: 357 AVSCTAASKEKRH 395
           A  C A    KRH
Sbjct: 509 AAQCNAVEHCKRH 521


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,216,621
Number of Sequences: 219361
Number of extensions: 1734367
Number of successful extensions: 4692
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4686
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)