ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16o08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 484 e-133
2ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predic... 262 1e-66
3emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 262 1e-66
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 262 1e-66
5ref|NM_127903.3| Arabidopsis thaliana unknown protein AT2G23390 ... 78 4e-11
6gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, comp... 78 4e-11
7gb|BT002268.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, comp... 78 4e-11
8gb|BT014104.1| Lycopersicon esculentum clone 133208F, mRNA sequence 56 1e-04
9gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map... 42 2.2
10gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 42 2.2
11emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-7... 42 2.2
12dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone... 42 2.2
13gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 8.7
14gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 8.7
15gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete... 40 8.7
16gb|AC122889.3| Mus musculus BAC clone RP23-93M3 from chromosome ... 40 8.7
17gb|AC092350.4| Homo sapiens chromosome 16 clone RP11-29G3, compl... 40 8.7
18gb|AF132668.1| White spot syndrome virus thymidine kinase gene, ... 40 8.7
19gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 40 8.7
20gb|AF459918.1| Bacillus licheniformis competence transcription r... 40 8.7
21gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complet... 40 8.7
22gb|AY672791.1| Manduca sexta hemolymph proteinase 16 mRNA, compl... 40 8.7
23gb|AF332093.1|AF332093 White spot syndrome virus, complete genome 40 8.7
24gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53... 40 8.7
25gb|AC158676.12| Mus musculus 6 BAC RP23-146N13 (Roswell Park Can... 40 8.7
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.7
27gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, r... 40 8.7
28gb|AF369029.2| White spot syndrome virus, complete genome 40 8.7
29gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, comple... 40 8.7
30gb|AC126172.8| Homo sapiens 12 BAC RP11-654C3 (Roswell Park Canc... 40 8.7
31gb|AC007942.16|AC007942 Mus musculus chromosome , clone CT7-56G4... 40 8.7
32dbj|AK026373.1| Homo sapiens cDNA: FLJ22720 fis, clone HSI14320 40 8.7
33gb|AF440570.1| Shrimp white spot syndrome virus, complete genome 40 8.7
34gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46... 40 8.7
35dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 8.7
36emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (... 40 8.7
37gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.7
38gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 8.7
39gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, comple... 40 8.7 
>dbj|AK073492.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040F03, full
            insert sequence
          Length = 1732

 Score =  484 bits (244), Expect = e-133
 Identities = 389/436 (89%), Gaps = 1/436 (0%)
 Strand = Plus / Minus

                                                                        
Query: 196  aaattctttcaatatgtcttccttgtatggacctgattcatgcaggacattgatgacatg 255
            |||||| |||| ||| |||||||||||||| || || ||||||||||| || || |||||
Sbjct: 1514 aaattcgttcagtatatcttccttgtatgggccggaatcatgcaggaccttaataacatg 1455

                                                                        
Query: 256  cttaacctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttc 315
             ||||||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||
Sbjct: 1454 tttaacctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatc 1395

                                                                        
Query: 316  taagaagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctc 375
            ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 1394 taagaagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctc 1335

                                                                        
Query: 376  tccctgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 435
            ||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1334 tccttgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 1275

                                                                        
Query: 436  gtaatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggcatccccataa 495
             ||||||||||||||||||||||||||||||||||  |||||||| || || ||||||||
Sbjct: 1274 ataatagcaagcttcaaaatgcaaattggggaaataagcatctggcagacagccccataa 1215

                                                                        
Query: 496  gcgaccatataatgtatcacctccaatcagattaagagctccagcgacaagtttatcatc 555
            ||| ||| | ||||| ||||||||||| || |||||||| || || ||| ||||||| ||
Sbjct: 1214 gcggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatgtttatcgtc 1155

                                                                        
Query: 556  atgttcagcaacaattagcattaccttgtcgcccatctttttcacccaaaaggtgaaaga 615
            ||||||||||||||| ||||| |||||||| |||||| ||||| |||||  |||||||||
Sbjct: 1154 atgttcagcaacaataagcatcaccttgtcacccatc-ttttctcccaagcggtgaaaga 1096

                            
Query: 616  actcccgtgtcaagta 631
            | |||| |||||||||
Sbjct: 1095 attcccttgtcaagta 1080
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>ref|XM_472625.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5022

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Minus

                                                                        
Query: 260  acctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttctaag 319
            |||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||||||
Sbjct: 4637 acctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatctaag 4578

                                                                        
Query: 320  aagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctctccc 379
            ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 4577 aagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctctcct 4518

                                                                    
Query: 380  tgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 435
            ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 4517 tgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 4462



 Score =  180 bits (91), Expect = 4e-42
 Identities = 170/195 (87%), Gaps = 1/195 (0%)
 Strand = Plus / Minus

                                                                        
Query: 437  taatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggcatccccataag 496
            ||||||||||||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 4442 taatagcaagcttcaaaatgcaaattggggaaataagcatctggcagacagccccataag 4383

                                                                        
Query: 497  cgaccatataatgtatcacctccaatcagattaagagctccagcgacaagtttatcatca 556
            || ||| | ||||| ||||||||||| || |||||||| || || ||| ||||||| |||
Sbjct: 4382 cggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatgtttatcgtca 4323

                                                                        
Query: 557  tgttcagcaacaattagcattaccttgtcgcccatctttttcacccaaaaggtgaaagaa 616
            |||||||||||||| ||||| |||||||| |||||| ||||| |||||  ||||||||||
Sbjct: 4322 tgttcagcaacaataagcatcaccttgtcacccatc-ttttctcccaagcggtgaaagaa 4264

                           
Query: 617  ctcccgtgtcaagta 631
             |||| |||||||||
Sbjct: 4263 ttcccttgtcaagta 4249
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>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Minus

                                                                         
Query: 260   acctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttctaag 319
             |||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||||||
Sbjct: 97375 acctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatctaag 97316

                                                                         
Query: 320   aagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctctccc 379
             ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 97315 aagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctctcct 97256

                                                                     
Query: 380   tgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 435
             ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 97255 tgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 97200



 Score =  184 bits (93), Expect = 2e-43
 Identities = 178/205 (86%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                         
Query: 427   aattgcctggtaatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggca 486
             |||| |||| ||||||||||||||||||||||||||||||||||  |||||||| || ||
Sbjct: 96929 aattacctgataatagcaagcttcaaaatgcaaattggggaaataagcatctggcagaca 96870

                                                                         
Query: 487   tccccataagcgaccatataatgtatcacctccaatcagattaagagctccagcgacaag 546
              ||||||||||| ||| | ||||| ||||||||||| || |||||||| || || ||| |
Sbjct: 96869 gccccataagcggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatg 96810

                                                                         
Query: 547   tttatcatcatgttcagcaacaattagcattaccttgtcgcccatctttttcacccaaaa 606
             |||||| ||||||||||||||||| ||||| |||||||| |||||| ||||| |||||  
Sbjct: 96809 tttatcgtcatgttcagcaacaataagcatcaccttgtcacccatc-ttttctcccaagc 96751

                                      
Query: 607   ggtgaaagaactcccgtgtcaagta 631
             |||||||||| |||| |||||||||
Sbjct: 96750 ggtgaaagaattcccttgtcaagta 96726



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                         
Query: 196   aaattctttcaatatgtcttccttgtatggacctgattcatgcaggacattgatgacatg 255
             |||||| |||| ||| |||||||||||||| || || ||||||||||| || || |||||
Sbjct: 97973 aaattcgttcagtatatcttccttgtatgggccggaatcatgcaggaccttaataacatg 97914

                       
Query: 256   cttaacctga 265
              |||||||||
Sbjct: 97913 tttaacctga 97904
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  262 bits (132), Expect = 1e-66
 Identities = 165/176 (93%)
 Strand = Plus / Minus

                                                                            
Query: 260      acctgagctgtctcatgtacaagaaaatttcctatagctgtcgcaaaaccaggttctaag 319
                |||||||| ||||||||||||||| ||||||||||||||| | |||||||||| ||||||
Sbjct: 22031453 acctgagccgtctcatgtacaagataatttcctatagctgccccaaaaccaggatctaag 22031394

                                                                            
Query: 320      aagtagtggcagctgtaagttgtcacagggaggtaaccacgctggatcttgtgctctccc 379
                ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| 
Sbjct: 22031393 aagtagtggcagctgtatgttgtcactgggaggtaaccacgctggatcttgtgctctcct 22031334

                                                                        
Query: 380      tgagcacctgcttccaccttactcaggtttagttctatggctgcttcaattgcctg 435
                ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 22031333 tgagcacctgcctccaccttactcaggttcagttctatagctgcttcaattgcctg 22031278



 Score =  184 bits (93), Expect = 2e-43
 Identities = 178/205 (86%), Gaps = 1/205 (0%)
 Strand = Plus / Minus

                                                                            
Query: 427      aattgcctggtaatagcaagcttcaaaatgcaaattggggaaatgtgcatctggtaggca 486
                |||| |||| ||||||||||||||||||||||||||||||||||  |||||||| || ||
Sbjct: 22031007 aattacctgataatagcaagcttcaaaatgcaaattggggaaataagcatctggcagaca 22030948

                                                                            
Query: 487      tccccataagcgaccatataatgtatcacctccaatcagattaagagctccagcgacaag 546
                 ||||||||||| ||| | ||||| ||||||||||| || |||||||| || || ||| |
Sbjct: 22030947 gccccataagcggccaaacaatgtgtcacctccaataaggttaagagccccggcaacatg 22030888

                                                                            
Query: 547      tttatcatcatgttcagcaacaattagcattaccttgtcgcccatctttttcacccaaaa 606
                |||||| ||||||||||||||||| ||||| |||||||| |||||| ||||| |||||  
Sbjct: 22030887 tttatcgtcatgttcagcaacaataagcatcaccttgtcacccatc-ttttctcccaagc 22030829

                                         
Query: 607      ggtgaaagaactcccgtgtcaagta 631
                |||||||||| |||| |||||||||
Sbjct: 22030828 ggtgaaagaattcccttgtcaagta 22030804



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                            
Query: 196      aaattctttcaatatgtcttccttgtatggacctgattcatgcaggacattgatgacatg 255
                |||||| |||| ||| |||||||||||||| || || ||||||||||| || || |||||
Sbjct: 22032051 aaattcgttcagtatatcttccttgtatgggccggaatcatgcaggaccttaataacatg 22031992

                          
Query: 256      cttaacctga 265
                 |||||||||
Sbjct: 22031991 tttaacctga 22031982
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>ref|NM_127903.3| Arabidopsis thaliana unknown protein AT2G23390 mRNA, complete cds
          Length = 1749

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 350  aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 409
            ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 1405 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 1346

                                                           
Query: 410  agttctatggctgcttcaattgcctggtaatagcaagcttcaaaatg 456
            || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1345 agctctatcgctgcttcaattgcctggtaatagcatgcttcaaaatg 1299
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>gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, complete cds
          Length = 1640

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 350  aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 409
            ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 1405 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 1346

                                                           
Query: 410  agttctatggctgcttcaattgcctggtaatagcaagcttcaaaatg 456
            || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1345 agctctatcgctgcttcaattgcctggtaatagcatgcttcaaaatg 1299
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>gb|BT002268.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, complete cds
          Length = 1410

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                        
Query: 350  aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 409
            ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 1262 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 1203

                                                           
Query: 410  agttctatggctgcttcaattgcctggtaatagcaagcttcaaaatg 456
            || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 1202 agctctatcgctgcttcaattgcctggtaatagcatgcttcaaaatg 1156
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>gb|BT014104.1| Lycopersicon esculentum clone 133208F, mRNA sequence
          Length = 1724

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 431  gcctggtaatagcaagcttcaaaatgcaaatt 462
            |||||||||||||| |||||||||||||||||
Sbjct: 1269 gcctggtaatagcatgcttcaaaatgcaaatt 1238
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>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete
             sequence
          Length = 123360

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 432   cctggtaatagcaagcttcaaaatg 456
             ||||||||||||| |||||||||||
Sbjct: 12339 cctggtaatagcatgcttcaaaatg 12363



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                         
Query: 350   aggtaaccacgctggatcttgtgctctccctgagcacctgcttccaccttactcaggttt 409
             ||||| || ||||| ||||| ||||| ||||| || || ||||| ||| |  |||| || 
Sbjct: 12173 aggtagcctcgctgaatcttatgctcaccctgcgctccagcttctaccgttttcagatta 12232

                                      
Query: 410   agttctatggctgcttcaattgcct 434
             || ||||| ||||||||||||||||
Sbjct: 12233 agctctatcgctgcttcaattgcct 12257
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>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete
             sequence
          Length = 154626

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   tggctgaggagcaaattcttt 204
             |||||||||||||||||||||
Sbjct: 52928 tggctgaggagcaaattcttt 52908
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>emb|AL133444.4|CNS01DV0 Human chromosome 14 DNA sequence BAC R-724F15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192387

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 372   gctctccctgagcacctgctt 392
             |||||||||||||||||||||
Sbjct: 18120 gctctccctgagcacctgctt 18140
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>dbj|AP006102.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16B11, TM0182,
             complete sequence
          Length = 80583

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   ctggatcttgtgctctccctg 381
             |||||||||||||||||||||
Sbjct: 39584 ctggatcttgtgctctccctg 39604
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 599     acccaaaaggtgaaagaact 618
               ||||||||||||||||||||
Sbjct: 1118805 acccaaaaggtgaaagaact 1118786
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 599     acccaaaaggtgaaagaact 618
               ||||||||||||||||||||
Sbjct: 1119659 acccaaaaggtgaaagaact 1119640
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>gb|AC004520.2| Homo sapiens BAC clone CTB-119C2 from 7, complete sequence
          Length = 132557

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    acatctgttgtatttatggttgta 140
              |||| |||||||||||||||||||
Sbjct: 130998 acatttgttgtatttatggttgta 130975
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>gb|AC122889.3| Mus musculus BAC clone RP23-93M3 from chromosome 1, complete sequence
          Length = 125681

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 168   tctacatttcaccatctggctgaggagc 195
             |||||||| ||||| |||||||||||||
Sbjct: 33071 tctacattgcaccaactggctgaggagc 33044
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>gb|AC092350.4| Homo sapiens chromosome 16 clone RP11-29G3, complete sequence
          Length = 174387

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    aaattctttcaatatgtctt 215
              ||||||||||||||||||||
Sbjct: 103732 aaattctttcaatatgtctt 103751
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>gb|AF132668.1| White spot syndrome virus thymidine kinase gene, complete cds; and
            unknown genes
          Length = 8715

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  tatggctgcttcaattgcct 434
            ||||||||||||||||||||
Sbjct: 5509 tatggctgcttcaattgcct 5528
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
              sequence
          Length = 149758

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 199    ttctttcaatatgtcttccttgta 222
              |||||||||||||| |||||||||
Sbjct: 122134 ttctttcaatatgttttccttgta 122111
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>gb|AF459918.1| Bacillus licheniformis competence transcription regulator ComK
           (comK) gene, complete cds
          Length = 1800

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 599 acccaaaaggtgaaagaact 618
           ||||||||||||||||||||
Sbjct: 284 acccaaaaggtgaaagaact 265
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>gb|AC097486.2| Homo sapiens BAC clone RP11-213L8 from 4, complete sequence
          Length = 158271

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 196   aaattctttcaatatgtcttcctt 219
             ||||||||| ||||||||||||||
Sbjct: 15529 aaattcttttaatatgtcttcctt 15552
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>gb|AY672791.1| Manduca sexta hemolymph proteinase 16 mRNA, complete cds
          Length = 1489

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 510 tatcacctccaatcagatta 529
           ||||||||||||||||||||
Sbjct: 836 tatcacctccaatcagatta 817
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>gb|AF332093.1|AF332093 White spot syndrome virus, complete genome
          Length = 305107

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    tatggctgcttcaattgcct 434
              ||||||||||||||||||||
Sbjct: 228914 tatggctgcttcaattgcct 228895
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>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone
              BACR32P08, complete sequence
          Length = 163072

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 439    atagcaagcttcaaaatgca 458
              ||||||||||||||||||||
Sbjct: 107239 atagcaagcttcaaaatgca 107220
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>gb|AC158676.12| Mus musculus 6 BAC RP23-146N13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 204560

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    gctgaggagcaaattctttcaata 209
              |||||||||||||| |||||||||
Sbjct: 146806 gctgaggagcaaatgctttcaata 146783
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 199      ttctttcaatatgtcttccttgta 222
                |||||||||||||| |||||||||
Sbjct: 16538108 ttctttcaatatgttttccttgta 16538131
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>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone
             BACR11M15, complete sequence
          Length = 170994

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   atagcaagcttcaaaatgca 458
             ||||||||||||||||||||
Sbjct: 31406 atagcaagcttcaaaatgca 31387
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>gb|AF369029.2| White spot syndrome virus, complete genome
          Length = 292967

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    tatggctgcttcaattgcct 434
              ||||||||||||||||||||
Sbjct: 277964 tatggctgcttcaattgcct 277945
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>gb|AC104801.4| Homo sapiens BAC clone RP11-356J12 from 2, complete sequence
          Length = 132644

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    aagaaaatttcctatagctg 299
              ||||||||||||||||||||
Sbjct: 101150 aagaaaatttcctatagctg 101131
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>gb|AC126172.8| Homo sapiens 12 BAC RP11-654C3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 111943

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    caagttccttccacccttct 170
              ||||||||||||||||||||
Sbjct: 101486 caagttccttccacccttct 101467
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>gb|AC007942.16|AC007942 Mus musculus chromosome , clone CT7-56G4, complete sequence
          Length = 122955

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 186    gctgaggagcaaattctttcaata 209
              |||||||||||||| |||||||||
Sbjct: 112111 gctgaggagcaaatgctttcaata 112088
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>dbj|AK026373.1| Homo sapiens cDNA: FLJ22720 fis, clone HSI14320
          Length = 1436

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 117 acatctgttgtatttatggttgta 140
           |||| |||||||||||||||||||
Sbjct: 855 acatttgttgtatttatggttgta 878
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>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome
          Length = 307287

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    tatggctgcttcaattgcct 434
              ||||||||||||||||||||
Sbjct: 263860 tatggctgcttcaattgcct 263841
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>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete
             sequence
          Length = 260337

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   atagcaagcttcaaaatgca 458
             ||||||||||||||||||||
Sbjct: 94531 atagcaagcttcaaaatgca 94512
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>dbj|AP002762.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-811I7, complete
              sequence
          Length = 189993

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 438    aatagcaagcttcaaaatgc 457
              ||||||||||||||||||||
Sbjct: 166636 aatagcaagcttcaaaatgc 166655
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>emb|BX537494.1|HSM805860 Homo sapiens mRNA; cDNA DKFZp686G0349 (from clone DKFZp686G0349)
          Length = 6299

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 117  acatctgttgtatttatggttgta 140
            |||| |||||||||||||||||||
Sbjct: 5717 acatttgttgtatttatggttgta 5740
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 199      ttctttcaatatgtcttccttgta 222
                |||||||||||||| |||||||||
Sbjct: 16546349 ttctttcaatatgttttccttgta 16546372
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 121     ctgttgtatttatggttgta 140
               ||||||||||||||||||||
Sbjct: 1108606 ctgttgtatttatggttgta 1108587
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>gb|AC122223.4| Mus musculus BAC clone RP23-130K20 from 1, complete sequence
          Length = 233830

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 168    tctacatttcaccatctggctgaggagc 195
              |||||||| ||||| |||||||||||||
Sbjct: 226302 tctacattgcaccaactggctgaggagc 226275


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,747,298
Number of Sequences: 3902068
Number of extensions: 5747298
Number of successful extensions: 106619
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106385
Number of HSP's gapped (non-prelim): 234
length of query: 639
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 616
effective length of database: 17,143,297,704
effective search space: 10560271385664
effective search space used: 10560271385664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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