ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16n18 |
|---|---|
| Clone Library Name | barley_pub |
>2A5G_ARATH (Q8RW96) Serine/threonine protein phosphatase 2A 59 kDa regulatory| subunit B' gamma isoform (PP2A, B' subunit, gamma isoform) (AtB' gamma) Length = 522 Score = 95.5 bits (236), Expect = 1e-19 Identities = 46/82 (56%), Positives = 58/82 (70%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RNT+GHWNQAVQSL+LNVRK+ + D +LF+ CL KFQ+DEA E V +KREATWK LEE Sbjct: 432 RNTRGHWNQAVQSLTLNVRKVMAETDQILFDECLAKFQEDEANETEVVAKREATWKLLEE 491 Query: 436 IASSHPQARRPQAIAHQQSSST 371 +A+S + + SS T Sbjct: 492 LAASKSVSNEAVLVPRFSSSVT 513
>2A5Z_ARATH (Q9LVE2) Serine/threonine protein phosphatase 2A 59 kDa regulatory| subunit B' zeta isoform (PP2A, B' subunit, zeta isoform) (AtB' zeta) Length = 518 Score = 87.0 bits (214), Expect = 4e-17 Identities = 38/64 (59%), Positives = 52/64 (81%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RNT+GHWNQAVQSL++NVRK+ + D VLF+ CL KFQ +E + V++KRE TW+RLE+ Sbjct: 425 RNTRGHWNQAVQSLTINVRKVLCEIDQVLFDECLAKFQVEEVNKTEVKAKRERTWQRLED 484 Query: 436 IASS 425 +A+S Sbjct: 485 LATS 488
>2A5T_ARATH (Q8LF36) Serine/threonine protein phosphatase 2A 57 kDa regulatory| subunit B' theta isoform (PP2A, B' subunit, theta isoform) (AtB' theta) Length = 492 Score = 86.3 bits (212), Expect = 7e-17 Identities = 40/63 (63%), Positives = 51/63 (80%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RNT+ HWNQAV SL+LNV+KIF D D LF+ CL KF++DE++E + +KREATWKRLEE Sbjct: 423 RNTQKHWNQAVHSLTLNVQKIFNDIDAELFKDCLAKFREDESKEAEIGAKREATWKRLEE 482 Query: 436 IAS 428 I + Sbjct: 483 IGN 485
>2A5N_ARATH (Q9LU89) Serine/threonine protein phosphatase 2A 59 kDa regulatory| subunit B' eta isoform (PP2A, B' subunit, eta isoform) (AtB' eta) Length = 510 Score = 84.7 bits (208), Expect = 2e-16 Identities = 39/61 (63%), Positives = 48/61 (78%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN + HWNQAV SL+LNVRKIF D DP LF+ CL KF++DE++ +KREATWKRLEE Sbjct: 444 RNAQKHWNQAVHSLTLNVRKIFHDLDPELFKECLAKFKEDESKAAETEAKREATWKRLEE 503 Query: 436 I 434 + Sbjct: 504 L 504
>2A5E_ARATH (Q9SV41) Serine/threonine protein phosphatase 2A 57 kDa regulatory| subunit B' epsilon isoform (PP2A, B' subunit, epsilon isoform) (AtB' epsilon) Length = 497 Score = 75.9 bits (185), Expect = 9e-14 Identities = 36/63 (57%), Positives = 46/63 (73%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN KGHWNQAV LS NVR++FL+ D LFE C K++ ++EA+ + +RE TWKRLEE Sbjct: 431 RNMKGHWNQAVHGLSENVRRMFLEMDTELFEECEKQYLENEAKACELLEQRELTWKRLEE 490 Query: 436 IAS 428 AS Sbjct: 491 AAS 493
>2A5I_ARATH (Q93YV6) Serine/threonine protein phosphatase 2A 57 kDa regulatory| subunit B' iota isoform (PP2A, B' subunit, iota isoform) (AtB' iota) Length = 500 Score = 69.7 bits (169), Expect = 6e-12 Identities = 31/81 (38%), Positives = 50/81 (61%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 +N + HWNQ+V +L+LNVRK+F + D LF C +F++DEA++ + KR+ W RLE Sbjct: 417 KNAQNHWNQSVLNLTLNVRKMFCEMDEALFMSCHARFKEDEAKQCSAAEKRKEVWARLEN 476 Query: 436 IASSHPQARRPQAIAHQQSSS 374 AS P + + +++S Sbjct: 477 AASMKPITGKTAVLVTPRATS 497
>2A5B_ARATH (O04376) Serine/threonine protein phosphatase 2A 57 kDa regulatory| subunit B' beta isoform (PP2A, B' subunit, beta isoform) (AtB' beta) Length = 499 Score = 69.3 bits (168), Expect = 8e-12 Identities = 27/63 (42%), Positives = 45/63 (71%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 +N + HWNQAV L+ N++K+F++ DP LFE C +++++ +A+ V +R+ TWKRL E Sbjct: 422 KNIQSHWNQAVHGLTTNIKKMFMEMDPELFEECQRQYEEKQAKSKEVEEQRQYTWKRLAE 481 Query: 436 IAS 428 A+ Sbjct: 482 AAA 484
>2A5D_ARATH (Q9ZQY6) Serine/threonine protein phosphatase 2A 55 kDa regulatory| subunit B' delta isoform (PP2A, B' subunit, delta isoform) (AtB' delta) Length = 477 Score = 68.9 bits (167), Expect = 1e-11 Identities = 30/64 (46%), Positives = 44/64 (68%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 +N HWNQAV++L+ NV K+ D +P LFE CL KFQ+D+ + + + K TW++LEE Sbjct: 411 KNGSSHWNQAVKNLTENVLKVLSDTNPDLFEECLHKFQEDQQKAEDTKKKNGETWRQLEE 470 Query: 436 IASS 425 I +S Sbjct: 471 IVAS 474
>2A5A_ARATH (O04375) Serine/threonine protein phosphatase 2A 57 kDa regulatory| subunit B' alpha isoform (PP2A, B' subunit, alpha isoform) (AtB' alpha) Length = 495 Score = 65.1 bits (157), Expect = 2e-10 Identities = 24/60 (40%), Positives = 43/60 (71%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 +N + HWNQAV LS N++++F++ DP LFE C +++++ +A+ V +R+ W+RL+E Sbjct: 422 KNIESHWNQAVHGLSANIKRMFMEMDPELFEECQQQYEEKQAKSKQVEEQRQNRWRRLDE 481
>2A5G_HUMAN (Q13362) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit gamma isoform (PP2A, B subunit, B' gamma isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma isoform) (NY-REN Length = 524 Score = 60.1 bits (144), Expect = 5e-09 Identities = 29/101 (28%), Positives = 55/101 (54%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN+K HWN+ + L N K+F++ + LF+ C ++F+ ++ +E +RE W ++E Sbjct: 376 RNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIEN 435 Query: 436 IASSHPQARRPQAIAHQQSSST*PPG*HAYEPLFLRIKLNR 314 +A ++PQ + Q S+ + P PLF +++ R Sbjct: 436 LAKANPQ----YTVYSQASTMSIPVAMETDGPLFEDVQMLR 472
>2A5G_RABIT (Q28651) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit gamma isoform (PP2A, B subunit, B' gamma isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma isoform) (PP2A, Length = 524 Score = 58.2 bits (139), Expect = 2e-08 Identities = 22/67 (32%), Positives = 42/67 (62%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN+K HWN+ + L N K+F++ + LF+ C ++F+ ++ +E +RE W ++E Sbjct: 376 RNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIEN 435 Query: 436 IASSHPQ 416 +A ++PQ Sbjct: 436 LAKANPQ 442
>2A5G_MOUSE (Q60996) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit gamma isoform (PP2A, B subunit, B' gamma isoform) (PP2A, B subunit, B56 gamma isoform) (PP2A, B subunit, PR61 gamma isoform) (PP2A, B subunit, R5 gamma isoform) (PP2A, Length = 524 Score = 58.2 bits (139), Expect = 2e-08 Identities = 22/67 (32%), Positives = 42/67 (62%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN+K HWN+ + L N K+F++ + LF+ C ++F+ ++ +E +RE W ++E Sbjct: 376 RNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFKAEKLKEKLKMKEREEAWVKIEN 435 Query: 436 IASSHPQ 416 +A ++PQ Sbjct: 436 LAKANPQ 442
>2A5D_RABIT (Q28653) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta isoform (PP2A, B subunit, B' delta isoform) (PP2A, B subunit, B56 delta isoform) (PP2A, B subunit, PR61 delta isoform) (PP2A, B subunit, R5 delta isoform) (PP2A, Length = 586 Score = 55.1 bits (131), Expect = 2e-07 Identities = 21/67 (31%), Positives = 42/67 (62%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN+K HWN+ + L N K+F++ + LF+ C ++++ ++ + +RE W+++EE Sbjct: 436 RNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEE 495 Query: 436 IASSHPQ 416 +A +PQ Sbjct: 496 LARLNPQ 502
>2A5D_HUMAN (Q14738) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta isoform (PP2A, B subunit, B' delta isoform) (PP2A, B subunit, B56 delta isoform) (PP2A, B subunit, PR61 delta isoform) (PP2A, B subunit, R5 delta isoform) Length = 602 Score = 55.1 bits (131), Expect = 2e-07 Identities = 21/67 (31%), Positives = 42/67 (62%) Frame = -3 Query: 616 RNTKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 RN+K HWN+ + L N K+F++ + LF+ C ++++ ++ + +RE W+++EE Sbjct: 452 RNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQYKAEKQKGRFRMKEREEMWQKIEE 511 Query: 436 IASSHPQ 416 +A +PQ Sbjct: 512 LARLNPQ 518
>2A5D_YEAST (P38903) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta isoform (PP2A, B subunit, B' delta isoform) (Protein RTS1) (Protein SCS1) Length = 757 Score = 47.0 bits (110), Expect = 4e-05 Identities = 19/56 (33%), Positives = 32/56 (57%) Frame = -3 Query: 604 GHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEE 437 G WN+A+ +++ KIFL+ +PVL+E C + + + +RE W +LEE Sbjct: 655 GSWNRAIHAMAFKALKIFLETNPVLYENCNALYLSSVKETQQRKVQREENWSKLEE 710
>2AD1_SCHPO (Q10428) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta 1 isoform (PP2A, B subunit, B' delta 1 isoform) Length = 548 Score = 46.6 bits (109), Expect = 6e-05 Identities = 21/70 (30%), Positives = 37/70 (52%) Frame = -3 Query: 610 TKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEEIA 431 +K HWN+ + S+ NV K+F+D +P LF+ ++ + +++ RE W LE IA Sbjct: 457 SKSHWNRVIHSMVCNVLKLFMDINPSLFDEVDAEYSESRRKKEDEEIIREERWTILENIA 516 Query: 430 SSHPQARRPQ 401 + + Q Sbjct: 517 KENAMKLKSQ 526
>2A5B_HUMAN (Q15173) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit beta isoform (PP2A, B subunit, B' beta isoform) (PP2A, B subunit, B56 beta isoform) (PP2A, B subunit, PR61 beta isoform) (PP2A, B subunit, R5 beta isoform) Length = 497 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -3 Query: 610 TKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEEI 434 +K HWNQ + SL NV K F++ + LF+ ++ ++ QE +R+ W+ LEE+ Sbjct: 409 SKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLEKQQEQQKAQERQELWQGLEEL 467
>2A5A_MOUSE (Q6PD03) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit alpha isoform (PP2A, B subunit, B' alpha isoform) (PP2A, B subunit, B56 alpha isoform) (PP2A, B subunit, PR61 alpha isoform) (PP2A, B subunit, R5 alpha isoform) (PR61al Length = 486 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/59 (32%), Positives = 33/59 (55%) Frame = -3 Query: 610 TKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEEI 434 +K HWNQ + +L NV K ++ + LF+ ++ + +E +RE WK+LEE+ Sbjct: 403 SKEHWNQTIVALVYNVLKTLMEMNGKLFDDLTSSYKAERQREKKKELEREELWKKLEEL 461
>2A5B_RABIT (Q28647) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit beta isoform (PP2A, B subunit, B' beta isoform) (PP2A, B subunit, B56 beta isoform) (PP2A, B subunit, PR61 beta isoform) (PP2A, B subunit, R5 beta isoform) (PP2A, B sub Length = 500 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/59 (33%), Positives = 34/59 (57%) Frame = -3 Query: 610 TKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEEI 434 +K HWNQ + SL NV K F++ + LF+ ++ ++ QE +R+ W+ LEE+ Sbjct: 409 SKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLEKQQEQQKARERQELWQGLEEL 467
>2AD2_SCHPO (P78759) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit delta 2 isoform (PP2A, B subunit, B' delta 2 isoform) Length = 627 Score = 43.5 bits (101), Expect = 5e-04 Identities = 17/60 (28%), Positives = 36/60 (60%) Frame = -3 Query: 601 HWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEEIASSH 422 HWN +Q+++ NV +IF+D D F G ++ ++ +++ V R+ W ++E +A+ + Sbjct: 561 HWNSTIQAIACNVLQIFVDMDADFFNGLVEDYKQAIIKQEEVMIIRKQQWCQIEALAAEN 620
>2A5A_HUMAN (Q15172) Serine/threonine-protein phosphatase 2A 56 kDa regulatory| subunit alpha isoform (PP2A, B subunit, B' alpha isoform) (PP2A, B subunit, B56 alpha isoform) (PP2A, B subunit, PR61 alpha isoform) (PP2A, B subunit, R5 alpha isoform) Length = 486 Score = 42.0 bits (97), Expect = 0.001 Identities = 18/59 (30%), Positives = 32/59 (54%) Frame = -3 Query: 610 TKGHWNQAVQSLSLNVRKIFLDHDPVLFEGCLKKFQDDEAQEDAVRSKREATWKRLEEI 434 +K HWN + +L NV K ++ + LF+ ++ + +E +RE WK+LEE+ Sbjct: 403 SKEHWNPTIVALVYNVLKTLMEMNGKLFDDLTSSYKAERQREKKKELEREELWKKLEEL 461
>TRDH_YLDV (Q9DHK3) Transcript release DNA helicase (EC 3.6.1.-)| Length = 479 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +3 Query: 54 TYSLXCRLACTLTSCSTYTLYKPGQVICLP 143 T L C T+TSC +L+K VICLP Sbjct: 109 TLHLACGFGKTITSCYLLSLHKKKAVICLP 138
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 30.0 bits (66), Expect = 5.7 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = -1 Query: 132 LPVLAYIRCMCCKRSMCMPACSXRNRCE 49 +PV CC++S C PAC + C+ Sbjct: 116 VPVCCGAASSCCRQSSCQPACCASSSCQ 143
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 30.0 bits (66), Expect = 5.7 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -1 Query: 132 LPVLAYIRCMCCKRSMCMPACSXRNRC 52 +PV + +CC++S C PAC + C Sbjct: 177 VPVCSGASSLCCQKSSCQPACCTTSCC 203
>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated| protein 10.12) (High sulfur keratin-associated protein 10.12) (Keratin-associated protein 18-12) (Keratin-associated protein 18.12) Length = 245 Score = 29.6 bits (65), Expect = 7.4 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = -1 Query: 132 LPVLAYIRCMCCKRSMCMPACSXRNRC 52 +PV + +CC++S C PAC + C Sbjct: 163 VPVCSGASSLCCQQSSCQPACCTTSCC 189
>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated| protein 10.4) (High sulfur keratin-associated protein 10.4) (Keratin-associated protein 18-4) (Keratin-associated protein 18.4) Length = 401 Score = 29.6 bits (65), Expect = 7.4 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = -1 Query: 138 GRLPVLAYIRCMCCKRSMCMPACSXRNRCE 49 G +P+ + +CC++S C PAC ++ + Sbjct: 285 GSVPICSGASSLCCQQSSCQPACCTSSQSQ 314
>XDH_DROME (P10351) Xanthine dehydrogenase (EC 1.17.1.4) (XD) (Protein rosy| locus) Length = 1335 Score = 29.6 bits (65), Expect = 7.4 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -3 Query: 550 LDHDPV--LFEGCLKKFQDDEAQEDAVRSKREATWKR 446 L+H P+ E CLK+ + DE +++ R RE W++ Sbjct: 964 LEHFPIERCLEDCLKQSRYDEKRQEIARFNRENRWRK 1000
>YMS0_YEAST (Q05043) Hypothetical 43.5 kDa protein in TAP42-CYK2 intergenic| region Length = 376 Score = 29.3 bits (64), Expect = 9.7 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = -1 Query: 570 LMFAKYSWTMTLYCSRGASRSSRTMKLKKMRCDQNVR-LHGSA*RKLPRHIHK 415 L+FAK T+ YC R+ R + + D+N R HGS RK RH+ K Sbjct: 164 LLFAKSPLTINTYCQFYDRRTKRICNQEMIWKDKNSREKHGS--RKYQRHLSK 214
>PGCB_HUMAN (Q96GW7) Brevican core protein precursor (Brain-enriched| hyaluronan-binding protein) (BEHAB protein) Length = 911 Score = 29.3 bits (64), Expect = 9.7 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Frame = -3 Query: 514 KKFQDDEAQEDAVRSKR---EATWKRLEEIASSHPQARRPQAIAHQQSSST*PPG*HAYE 344 +K++D+E +E+ + EA W E++S P+A P A Q+ S + P + Sbjct: 457 EKYEDEEEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEESLSQAPARAVLQ 516 Query: 343 P 341 P Sbjct: 517 P 517 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,403,924 Number of Sequences: 219361 Number of extensions: 1802585 Number of successful extensions: 4859 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 4323 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4850 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
