>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 27/104 (25%), Positives = 36/104 (34%), Gaps = 4/104 (3%)
 Frame = -2

Query: 518 PPAASPGAGHYMSQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQMVARPGAVNGIPQ 339
           PP   P      +Q P  PP  P  P                P  G   A  GA   + +
Sbjct: 578 PPPPPPPPPPLPNQAPPPPPPPPAPPLPASGIFSGSTSEDNRPLTGLAAAIAGA--KLRK 635

Query: 338 APQVEQPAYAAGGASSEPSGTESHRSTGADND----GGSGLADQ 219
             +VE  ++  GG +   S   S    G  N     GGSGL ++
Sbjct: 636 VSRVEDGSFPGGGNTGSVSLASSKADAGRGNGPLPLGGSGLMEE 679

>SEC9_YARLI (Q6C5G0) Protein transport protein SEC9|
          Length = 608

 Score = 33.9 bits (76), Expect = 0.28
 Identities = 22/53 (41%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
 Frame = -2

Query: 371 ARPGAVNGIPQAPQVEQP-------AYAAGGASSEPSGTESHRSTGADNDGGS 234
           A P A    P A Q +QP       A AAGGAS  P G     S G   +GGS
Sbjct: 56  AAPPAARSNPYAVQNQQPSGGNPYAAAAAGGASGSPYGGSDPYSNGGGGNGGS 108

>ENAH_HUMAN (Q8N8S7) Protein enabled homolog|
          Length = 591

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 4/103 (3%)
 Frame = -2

Query: 515 PAASPGAGHYMSQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQMVARPGAVNGIPQA 336
           P   P      +QVP  PP  P  P                P  G   A  GA   + + 
Sbjct: 347 PPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLASMSEDNRPLTGLAAAIAGA--KLRKV 404

Query: 335 PQVEQPAYAAG----GASSEPSGTESHRSTGADNDGGSGLADQ 219
            ++E  ++ +G    G +S  S T++ R  G    GGSGL ++
Sbjct: 405 SRMEDTSFPSGGNAIGVNSASSKTDTGRGNGPLPLGGSGLMEE 447

>ZIMP7_MOUSE (Q8CIE2) PIAS-like protein Zimp7|
          Length = 920

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -3

Query: 364 PGLSMAFPRPLKLNNQPMQQ--VGPVPSLLAPRATGALAPITMVGAAWLTSP 215
           PG  +  P P   + QP+ Q   GP+  L    A+G + P +M GA   + P
Sbjct: 831 PGTQLHHPNPSPASRQPLGQPNTGPISELAFNPASGMMGPPSMTGAGEASEP 882

>RLA3_TRYCR (P26795) 60S acidic ribosomal protein P2-B (P2B)|
          Length = 112

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2

Query: 359 AVNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGADNDGGSGLAD 222
           AV+  P A     PA AAGGA++  +          D+D G GL D
Sbjct: 67  AVSAAPAAGDAAAPAAAAGGAAAPAAADAKKEEEEEDDDMGFGLFD 112

>Y936_PSEPK (Q88PB4) Maf-like protein PP0936|
          Length = 203

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +3

Query: 150 SVCPGASIHAFCDLKRKLVAFLGLVSQAAPTIVIGASAPVALGARRLG 293
           S  P  S  A+ +   +  A  GLVS   P +V+GA   V L  R LG
Sbjct: 34  SPLPSESAPAYVERLARAKAAAGLVSVDGPAVVLGADTAVVLDGRILG 81

>ESR3_MICUN (P57783) Estrogen receptor gamma (ER-gamma)|
          Length = 565

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
 Frame = -3

Query: 352 MAFPRPL--KLNNQPMQ----QVGPVPSLLAPRATGALAPITMVGAAWLTSPKKATSLRF 191
           M  P PL    + QP+Q    ++ P+ ++L  +  GA  P+ +V       P +  S R 
Sbjct: 96  MGSPIPLHHSQHGQPIQSPWVEISPLDNVLKTKQDGASLPLAVV-------PVRHKSARR 148

Query: 190 RSQN---ACILAPGQTEDHSCAL 131
           RSQ    A + + G+T+ H CA+
Sbjct: 149 RSQESEEAVVTSGGKTDLHYCAV 171

>UN112_DROME (Q9VZI3) Unc-112-related protein (Fermitin-1)|
          Length = 708

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 344 PQAPQVEQPAYAAGGASSEPSGTESHRSTG-ADNDGGSGLAD 222
           P +P   + A A G   S P+GT  H STG A  D  S   D
Sbjct: 197 PASPYTRRAATAPGTPISSPTGTWKHNSTGYASYDSNSSFGD 238

>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640|
          Length = 1069

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 10/102 (9%)
 Frame = -2

Query: 524 MAPPAASPGAGH---YMSQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQ-------M 375
           M PPA  PGA H    +S +P  PP   + P                P   Q        
Sbjct: 258 MPPPATFPGAPHGRPAVSGLPYGPPSAQVAPPLGFPGQMQPPRYGMGPLPNQSMTNIPTA 317

Query: 374 VARPGAVNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGAD 249
           + +PGA   +P   +++       G+SS P+  E+ +S  A+
Sbjct: 318 MGQPGAT--VPGPSRIDPNQIPRPGSSSSPTVFETRQSNQAN 357

>KCNH3_HUMAN (Q9ULD8) Potassium voltage-gated channel subfamily H member 3|
            (Voltage-gated potassium channel subunit Kv12.2)
            (Ether-a-go-go-like potassium channel 2) (ELK channel 2)
            (ELK2) (Brain-specific eag-like channel 1) (BEC1)
          Length = 1083

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 24/97 (24%), Positives = 32/97 (32%)
 Frame = -2

Query: 515  PAASPGAGHYMSQVPMFPPRTPLTPXXXXXXXXXXXXXXXLPFAGQMVARPGAVNGIPQA 336
            P   PG    M+  P  PP +  +P                P +G + + P      P +
Sbjct: 962  PHPRPGPPPLMAPWPWGPPASQSSPWPRATAFWTSTSDSEPPASGDLCSEPST----PAS 1017

Query: 335  PQVEQPAYAAGGASSEPSGTESHRSTGADNDGGSGLA 225
            P   +     G A  EP       STG    G  GLA
Sbjct: 1018 PPPSEEGARTGPA--EPVSQAEATSTGEPPPGSGGLA 1052

>POL1_GCMV (P13025) RNA1 polyprotein (P1) [Contains: P1A protein (1A) (Protease|
            cofactor); Putative ATP-dependent helicase (EC 3.6.1.-)
            (NTP-binding protein) (NTB) (1B) (Membrane-binding
            protein); Viral genome-linked protein (1C-VPg); Picornain
            3C-like pr
          Length = 2252

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 170  YTCILRPKTQA-RSFLRTGQPSRSHHRYRRQCSCGSRCQKARNWPHLLHRL 319
            Y  +LR KT A  +FL+       H+R+R  C  G+    +R W HLL+RL
Sbjct: 1649 YNLLLRVKTCAFTAFLQ-------HNRHRLPCQVGTN-PYSREWGHLLNRL 1691

>CN032_BOVIN (Q5E9L3) Protein C14orf32 homolog|
          Length = 240

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 364 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 227
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 150 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 194

>CN032_PONPY (Q5R623) Protein C14orf32 homolog|
          Length = 245

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 364 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 227
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 155 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 199

>CN032_MACFA (Q4R837) Protein C14orf32 homolog|
          Length = 245

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 364 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 227
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 155 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 199

>CN032_HUMAN (Q8NDC0) Protein C14orf32|
          Length = 245

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -3

Query: 364 PGLSMAFPRPLKLNNQPMQQVGPVPSLLAPRATGALAPI---TMVGAAW 227
           PG+   +P P    N P    GP P+   P+A GA  P+   T+   AW
Sbjct: 155 PGMGGQYPTP----NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAW 199

>DMRT1_PIG (Q9TT01) Doublesex- and mab-3-related transcription factor 1|
          Length = 373

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -2

Query: 371 ARPGAVNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGADNDGGSGLADQS 216
           ++P A +  P AP    P   AGG S    GT     +G  + GGSG +  S
Sbjct: 8   SKPSAPSEAPHAPG-PPPQGKAGGFSKALLGTSGGGGSGGSSGGGSGASGMS 58

>DSBB_NEIMA (Q9JTA9) Disulfide bond formation protein B (Disulfide|
           oxidoreductase)
          Length = 162

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +3

Query: 165 ASIHAFCDLKRKLVAFLGLVSQAAPTIVIGASAPVALGARRL--GTGPTCCIGWLFNLRG 338
           A+I   C  +RK     G V  + P +   + A   L  + L  GT P+C   W F L+G
Sbjct: 52  AAIVLMCRPRRKAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCGAPWTFRLKG 111

>MARCS_BOVIN (P12624) Myristoylated alanine-rich C-kinase substrate (MARCKS)|
           (ACAMP-81)
          Length = 331

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -2

Query: 386 AGQMVARPGA-----VNGIPQAPQVEQPAYAAGGASSEPSGTESHRSTGADNDGGS 234
           A    A PGA      NG   A   E+PA A  GA+S P+  E      A  D G+
Sbjct: 44  ASPAAAEPGAKEELQANGSAPAADKEEPAAAGSGAAS-PAAAEKDEPAAAAPDAGA 98

>PAT1_YEAST (P25644) Topoisomerase II-associated protein PAT1|
          Length = 796

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 527 QMAPPAASPGAGHYMSQVPMFPPRTPL 447
           Q APP   PG    M+Q+PM P + P+
Sbjct: 192 QFAPPPPPPGVNVNMNQMPMGPVQVPV 218

>SCG1_BOVIN (P23389) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: GAWK peptide; Peptide
           BAM-1745; Secretolytin]
          Length = 646

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 233 RSHHRYRRQCSCGSRCQKARNWPHLLHRLVVQLEGPGE 346
           +SH R R     G   +   NWP  L R     E PGE
Sbjct: 211 KSHSRERSSQESGEETKSQENWPQELQRHPEGQEAPGE 248


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,524,097
Number of Sequences: 219361
Number of extensions: 1222442
Number of successful extensions: 4570
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4564
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)