>MRIP_HUMAN (Q6WCQ1) Myosin phosphatase Rho-interacting protein|
           (Rho-interacting protein 3) (M-RIP) (RIP3) (p116Rip)
          Length = 1024

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 535 HVATHAVDPLRAATLLRGRRSSPPFCRVDRRTGPTPPLPNPVLAGSRRQP-PRAGSRHRR 359
           H+ T+AV P  ++   +GR     F R    T   PP P P  + S   P  RA S  RR
Sbjct: 316 HMETNAVGPSPSSDTRQGRSEKRAFPRKRDFTNEAPPAPLPDASASPLSPHRRAKSLDRR 375

Query: 358 QTK 350
            T+
Sbjct: 376 STE 378

>FTSK_RHIME (Q92L89) DNA translocase ftsK|
          Length = 881

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = -1

Query: 436 PTPPLPNPVLAGSRRQPPR--AGSRHRR--QTKVVDSSSNCTNAPV 311
           P PP P   +AGSR  PPR  AG R  R  Q   VD   + T  P+
Sbjct: 337 PAPPKPALAMAGSRVAPPRPKAGQRVEREAQRSFVDEDGDFTLPPI 382

>POMT2_MOUSE (Q8BGQ4) Protein O-mannosyl-transferase 2 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           2)
          Length = 820

 Score = 31.2 bits (69), Expect = 2.3
 Identities = 22/52 (42%), Positives = 25/52 (48%)
 Frame = -1

Query: 535 HVATHAVDPLRAATLLRGRRSSPPFCRVDRRTGPTPPLPNPVLAGSRRQPPR 380
           H+ T + DPL   T  R R   PP  RV  R G  PP     LAGS  +P R
Sbjct: 40  HLETPSYDPL---TGQRTRPGVPPARRVILRKGRMPPAIGGGLAGSELRPRR 88

>DOCK2_MOUSE (Q8C3J5) Dedicator of cytokinesis protein 2 (Hch protein)|
          Length = 1828

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
 Frame = -1

Query: 214  AAVDLAGSHCCCCSTPPSLQARWFQIEQPPGRVPD*AEQP--PGRVLDSHTADRGGSRFR 41
            + + LA  H  C STP  + A  F +E  P + P   E+P  PG  L      R  S+ R
Sbjct: 1643 SVISLASMHSDC-STPSKVPAESFDLESAPPKTPKVEEEPISPGSTLPEVKLRR--SKKR 1699

Query: 40   PARTSRCF 17
              R+S  F
Sbjct: 1700 TKRSSVVF 1707

>DYN3_RAT (Q08877) Dynamin-3 (EC 3.6.5.5) (Dynamin, testicular) (T-dynamin)|
          Length = 848

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/50 (40%), Positives = 24/50 (48%)
 Frame = -1

Query: 532 VATHAVDPLRAATLLRGRRSSPPFCRVDRRTGPTPPLPNPVLAGSRRQPP 383
           V+T A  P+  + L   RRS PP     RR   + PLP P  A SR   P
Sbjct: 740 VSTPAPPPVDDSWLQHSRRSPPPSPTTQRRLTLSAPLPRP--ASSRGPAP 787

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = -1

Query: 487 RGRRSSPPFCRVDRRTGPTPPLPNPVLAGSRRQPPRAGSRHR 362
           R R  SPP  R  R   P PP P P     RR+ P    R R
Sbjct: 558 RRRSPSPPPARRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRR 599

>WASIP_RAT (Q6IN36) Wiskott-Aldrich syndrome protein-interacting protein|
           (WASP-interacting protein)
          Length = 487

 Score = 27.7 bits (60), Expect(2) = 5.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 442 TGPTPPLPNPVLAGSRRQPP 383
           T PTPPLP+P  +G    PP
Sbjct: 326 TSPTPPLPSPGRSGPLPPPP 345



 Score = 20.8 bits (42), Expect(2) = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 261 PSPVLRRPQARIGPRP 214
           P P +R P  R GP P
Sbjct: 349 PPPPVRDPPGRSGPLP 364

>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)|
            (CAIN)
          Length = 2220

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 16/63 (25%)
 Frame = +1

Query: 79   PEPGLEVALLNLEPVL----------------EAARSGTTWPGGTAECCSSSSEIRRDRQ 210
            PEPG +V LLN  PV                 E+ R+G T P  T+E     S++ R   
Sbjct: 1719 PEPGGKVGLLNHRPVAMDAGDSADQSGERKDKESPRAGPTEPMDTSEATVCHSDLERTPP 1778

Query: 211  LRP 219
            L P
Sbjct: 1779 LLP 1781

>AMC1_ORYSA (P27940) Alpha-amylase isozyme C (EC 3.2.1.1) (1,4-alpha-D-glucan|
           glucanohydrolase) (Isozyme 1B)
          Length = 348

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -1

Query: 463 FCRVDRRTGPTPPLPNPVLAGSRRQPPRAGSRHRRQTKVVDSSSNCTNA 317
           +CR+  R GP   LP   L    R+P   G R R  T    +SS  ++A
Sbjct: 129 YCRLPPRLGPAHDLPRRPLRRRHRKP---GHRRRTSTTSTSASSGSSSA 174

>YKR4_EBV (P30117) Hypothetical protein BKRF4|
          Length = 217

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -1

Query: 484 GRRSSPPFCRVDRRTGPTPPLPNPVLAGSRRQPPRAGSRHRRQTK 350
           G   +P F R   R  P PP P PV  G    PPR  +  ++ TK
Sbjct: 123 GLTPTPSFSRPRTRAPPRPPAPAPV-RGRASAPPRPPAPVQQSTK 166

>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa)
          Length = 1200

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -1

Query: 478 RSSPPFCRVDRRTGPTPPLPNPVLAGSRRQPPR 380
           RS PP   V R     P LP P+L  SRR P R
Sbjct: 158 RSPPPASAVQRVHHVYPALPTPLLRPSRRPPHR 190

>RLPA_TREPA (O83958) RlpA-like protein precursor|
          Length = 318

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 22/76 (28%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
 Frame = -1

Query: 532 VATHAVDPLRAATLLRGRRSSPPFCRVDRRTGPTPPLPN---PVLAGSRRQPPRAGSRHR 362
           V+ H  DP   A+  R  R + P        G  P  P    PV+      PP A    R
Sbjct: 115 VSIHKADPNAHASQQRNDRQTSPGVLPQDSFGVPPTAPTSSAPVMYADPHNPPPAPVGRR 174

Query: 361 RQTKVVDSSSNCTNAP 314
             T  V   +N T+ P
Sbjct: 175 AGTPGVPGVANTTDVP 190


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,221,768
Number of Sequences: 219361
Number of extensions: 1770598
Number of successful extensions: 6734
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6716
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5158951200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)