ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16i15 |
|---|---|
| Clone Library Name | barley_pub |
>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2| Length = 209 Score = 182 bits (463), Expect = 6e-46 Identities = 95/149 (63%), Positives = 104/149 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQNIRKLVKDGFII+KP KI +EAK+KGRHSGYGKR+GTREARLPTKI Sbjct: 37 SRQNIRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 KYRE+KKID+HMYHDMY+KVKGN+FKNKRVLMESIHK KAEKAREKTL+ Sbjct: 97 RRMRVLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLA 156 Query: 318 DQFXXXXXXXXXXXXXXXXXXXXRLAQGP 232 DQF RLAQGP Sbjct: 157 DQFEAKRIKNKASRERKFARREERLAQGP 185
>RL19C_ARATH (P49693) 60S ribosomal protein L19-3| Length = 208 Score = 180 bits (456), Expect = 4e-45 Identities = 94/149 (63%), Positives = 104/149 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQNIRKLVKDGFII+KP KI + AK+KGRHSGYGKR+GTREARLPTK+ Sbjct: 37 SRQNIRKLVKDGFIIRKPTKIHSRSRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 +KYRE KKID+HMYHDMY+KVKGN+FKNKRVLMESIHKSKAEKAREKTLS Sbjct: 97 RRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLS 156 Query: 318 DQFXXXXXXXXXXXXXXXXXXXXRLAQGP 232 DQF RLA+GP Sbjct: 157 DQFEAKRAKNKASRERKHARREERLAKGP 185
>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1| Length = 214 Score = 179 bits (455), Expect = 5e-45 Identities = 94/149 (63%), Positives = 102/149 (68%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQNIRKLVKDGFII+KP KI AK KGRHSGYGKR+GTREARLPTK+ Sbjct: 37 SRQNIRKLVKDGFIIRKPTKIHSRSRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 +KYRE KKIDKHMYHDMY++VKGN+FKNKRVLMESIHKSKAEKAREKTLS Sbjct: 97 RRMRVLRRLLKKYRETKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLS 156 Query: 318 DQFXXXXXXXXXXXXXXXXXXXXRLAQGP 232 DQF RLA+GP Sbjct: 157 DQFEAKRAKNKASRERKHARREERLAKGP 185
>RL19_DROME (P36241) 60S ribosomal protein L19| Length = 203 Score = 147 bits (370), Expect = 4e-35 Identities = 70/122 (57%), Positives = 87/122 (71%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQNIRKL+KDG IIKKP + EA++KGRH G+GKR+GT AR+PTK+ Sbjct: 37 SRQNIRKLIKDGLIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 +KYR++KKID+H+YHD+Y+K KGN+FKNKRVLME IHK KAEK R K L+ Sbjct: 97 QRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_RAT (P84100) 60S ribosomal protein L19| Length = 196 Score = 139 bits (351), Expect = 6e-33 Identities = 68/122 (55%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKL+KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_PONPY (Q5RB99) 60S ribosomal protein L19| Length = 196 Score = 139 bits (351), Expect = 6e-33 Identities = 68/122 (55%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKL+KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_MOUSE (P84099) 60S ribosomal protein L19| Length = 196 Score = 139 bits (351), Expect = 6e-33 Identities = 68/122 (55%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKL+KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19| Length = 196 Score = 139 bits (351), Expect = 6e-33 Identities = 68/122 (55%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKL+KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_HUMAN (P84098) 60S ribosomal protein L19| Length = 196 Score = 139 bits (351), Expect = 6e-33 Identities = 68/122 (55%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKL+KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19| Length = 196 Score = 139 bits (351), Expect = 6e-33 Identities = 68/122 (55%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKL+KDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19| Length = 197 Score = 139 bits (351), Expect = 6e-33 Identities = 69/122 (56%), Positives = 85/122 (69%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKLVKDG II+KP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLVKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19| Length = 196 Score = 138 bits (348), Expect = 1e-32 Identities = 69/122 (56%), Positives = 84/122 (68%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKLVKDG IIKKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YREAKKID+HMYH +YL+ KGN+FKNKR+LME IHK KA+KAR+K L+ Sbjct: 97 RRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19| Length = 196 Score = 136 bits (343), Expect = 5e-32 Identities = 68/122 (55%), Positives = 84/122 (68%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ IRKLVKDG IIKKP + A++KGRH G GKR+GT AR+P K+ Sbjct: 37 SRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWM 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YRE+KKID+HMYH +YL+ KGN+FKNKR+LME IHK KA++AR+K LS Sbjct: 97 RRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLS 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_CAEEL (O02639) 60S ribosomal protein L19| Length = 198 Score = 126 bits (317), Expect = 5e-29 Identities = 62/122 (50%), Positives = 80/122 (65%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQ+IR+LV DG II+KP + EA++KGRH+GYGKRRGT AR+P K Sbjct: 37 SRQSIRRLVNDGLIIRKPVTVHSRFRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWI 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 R+YR+AKK+DKH+YH++YL+ KGN FKNK+ L+E I K K E R K L+ Sbjct: 97 RRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLA 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein| V14) (22 kDa calmodulin-binding protein) Length = 186 Score = 126 bits (316), Expect = 7e-29 Identities = 64/122 (52%), Positives = 79/122 (64%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SR N+R+L+ GFI++KP + + AK+ GRH G G R GTREARLP+KI Sbjct: 37 SRDNVRRLIATGFIMRKPVVVHSRSRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWI 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 +KYREAKKIDKH Y ++YLK KGN+FKNKR L+E I KSK EK REK + Sbjct: 97 RRIRVLRRLLKKYREAKKIDKHSYRELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQ 156 Query: 318 DQ 313 DQ Sbjct: 157 DQ 158
>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)| Length = 192 Score = 123 bits (309), Expect = 4e-28 Identities = 60/122 (49%), Positives = 81/122 (66%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SRQN+RKL+KDG +I+KP + H AK+ GRH+GYGKR+GT EAR+P+ + Sbjct: 36 SRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWM 95 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 RKYRE+ KIDKH+YH +YL+ KGN FK+KR L+E I ++KAE R K + Sbjct: 96 RRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQ 155 Query: 318 DQ 313 +Q Sbjct: 156 EQ 157
>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)| Length = 188 Score = 119 bits (298), Expect = 8e-27 Identities = 58/122 (47%), Positives = 81/122 (66%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 SR IRKLVK+G I+KK + ++K++GRHSGYGKR+GTREARLP+++ Sbjct: 36 SRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWI 95 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLS 319 KYR+A KIDKH+YH +Y + KGN FK+KR L+E I ++KA+ REK L+ Sbjct: 96 RRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQAKADAQREKALN 155 Query: 318 DQ 313 ++ Sbjct: 156 EE 157
>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e| Length = 151 Score = 73.9 bits (180), Expect = 4e-13 Identities = 42/115 (36%), Positives = 60/115 (52%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 +R++IR+L+K+G I KKP K HE K+KGRH G G R+G + AR+ K Sbjct: 37 TREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWI 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAR 334 RK +E KKID+ Y +Y++ KG FK+K L + + K R Sbjct: 97 KTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>RL19_PYRHO (O59437) 50S ribosomal protein L19e| Length = 150 Score = 72.8 bits (177), Expect = 9e-13 Identities = 40/102 (39%), Positives = 56/102 (54%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 +R++IR+L+K+G I KKP + HE K+KGRH G G R+G + AR+ K Sbjct: 37 TREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWI 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 373 RK +E KKID+ Y +Y++ KG FKNK L Sbjct: 97 KTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)| Length = 150 Score = 70.9 bits (172), Expect = 3e-12 Identities = 39/102 (38%), Positives = 55/102 (53%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 +R++I++L+K+G I KKP K HE K+KGRH G G R+G + AR+ K Sbjct: 37 TREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWI 96 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 373 RK + KKID+ Y +Y++ KG FKNK L Sbjct: 97 KTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)| Length = 149 Score = 60.5 bits (145), Expect = 5e-09 Identities = 31/99 (31%), Positives = 49/99 (49%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 ++ +IR L+ DG I+KK +K E K+KG+ G G RRG + AR P K Sbjct: 36 TKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWM 95 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNK 382 ++ RE +KI++ Y +Y KG F+++ Sbjct: 96 NTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134
>RL19_METJA (P54043) 50S ribosomal protein L19e| Length = 151 Score = 60.1 bits (144), Expect = 6e-09 Identities = 32/99 (32%), Positives = 49/99 (49%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 S+ +IR L+K+G I KK +K E ++KGR G G RRG AR P K Sbjct: 39 SKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWM 98 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNK 382 ++ R++ KID+ +Y +Y KG F+++ Sbjct: 99 ATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137
>RL19_METTH (O26129) 50S ribosomal protein L19e| Length = 148 Score = 57.0 bits (136), Expect = 5e-08 Identities = 30/99 (30%), Positives = 48/99 (48%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 +R +++L+KDG I KP+K + K+KGR G G +G + AR P K Sbjct: 36 TRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWM 95 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKNK 382 ++ R+ ++I+K Y +Y KG FK+K Sbjct: 96 TTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
>RL19_ARCFU (O28372) 50S ribosomal protein L19e| Length = 149 Score = 52.0 bits (123), Expect = 2e-06 Identities = 28/98 (28%), Positives = 47/98 (47%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 ++Q+IR+L++ G I +KP K+KGR G+G R+G + AR+P K Sbjct: 39 TKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWI 98 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKN 385 R+ + +D+ Y +Y K KG F++ Sbjct: 99 LRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136
>RL19_SULAC (O05639) 50S ribosomal protein L19e| Length = 150 Score = 49.7 bits (117), Expect = 8e-06 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 8/116 (6%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 +R++I+KL+K+ +I P++ E K K R G G++ G+R+ + + Sbjct: 37 TREDIKKLIKERAVIVNPKR---GISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDK 93 Query: 498 XXXXXXXXXXRKY----REAKKIDKHMYHDMYLKVKGNMFKN----KRVLMESIHK 355 R+Y R+ IDKH Y +Y + KGN FKN K L + HK Sbjct: 94 EIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHK 149
>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e| Length = 155 Score = 45.4 bits (106), Expect = 2e-04 Identities = 28/98 (28%), Positives = 45/98 (45%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 ++ ++R L+K G I P+K H ++KGR G G+R+G ARL K Sbjct: 38 TKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWM 97 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFKN 385 R R+ + ID+ Y +Y+ KG F++ Sbjct: 98 HRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135
>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e| Length = 151 Score = 44.7 bits (104), Expect = 3e-04 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 1/98 (1%) Frame = -1 Query: 678 SRQNIRKLVKDG-FIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXX 502 +R IR L+KDG I+ K I + K G R+G + AR +K Sbjct: 37 TRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMW 96 Query: 501 XXXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMFK 388 + R+ K ID+H Y ++YLK KG +K Sbjct: 97 VKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>RL19_MAIZE (Q08066) 60S ribosomal protein L19 (Fragment)| Length = 62 Score = 42.7 bits (99), Expect = 0.001 Identities = 20/21 (95%), Positives = 20/21 (95%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKI 616 SRQNIRKLVKDGFIIKKP KI Sbjct: 34 SRQNIRKLVKDGFIIKKPHKI 54
>RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)| Length = 148 Score = 37.0 bits (84), Expect = 0.055 Identities = 24/96 (25%), Positives = 39/96 (40%) Frame = -1 Query: 678 SRQNIRKLVKDGFIIKKPQKIXXXXXXXXXHEAKQKGRHSGYGKRRGTREARLPTKIXXX 499 +R+++R+LV +G I K +K + + G G G R+G AR +K Sbjct: 36 TREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWE 95 Query: 498 XXXXXXXXXXRKYREAKKIDKHMYHDMYLKVKGNMF 391 R+ R+ + Y D+Y K G F Sbjct: 96 SRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEF 131
>LY75_HUMAN (O60449) Lymphocyte antigen 75 precursor (DEC-205) (gp200-MR6)| (CD205 antigen) Length = 1722 Score = 30.8 bits (68), Expect = 4.0 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 7/31 (22%) Frame = +3 Query: 219 LNGPLGPEQAS-------PPSWQSFFHGLPC 290 ++GPLGPE+AS P WQSF L C Sbjct: 626 MSGPLGPEEASPKPDDPCPEGWQSFPASLSC 656
>APS_HUMAN (O14492) SH2 and PH domain-containing adapter protein APS (Adapter| protein with pleckstrin homology and Src homology 2 domains) Length = 632 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 Query: 527 ASLVPLRLPYPEWRPFCFASWALRARDLEWIFWGFLMMKPSF 652 A+ VP+ +P P+WR FC A D F FL P++ Sbjct: 11 AAPVPVPVPVPDWRQFCELHAQAAAVDFAHKFCRFLRDNPAY 52
>VGLM_PTPV (P03517) M polyprotein precursor [Contains: Nonstructural protein| NS-M; Glycoprotein G1; Glycoprotein G2] Length = 1313 Score = 30.0 bits (66), Expect = 6.7 Identities = 19/45 (42%), Positives = 21/45 (46%) Frame = -3 Query: 265 CQEGGEACSGPKGPFSSSCSTCSGTKEVKEVKXLTFKLSVYSVKS 131 CQE + SGPK PF C G + KE K FK S Y S Sbjct: 432 CQENSDTYSGPKIPFKGVCKI--GLIKYKECK---FKTSSYETVS 471 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,933,643 Number of Sequences: 219361 Number of extensions: 1459791 Number of successful extensions: 4369 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 4087 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4358 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
