ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd16h22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CP17A_PAPHU (Q9GLD2) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 30 8.0
2CP17A_PAPCY (Q8HYN0) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 30 8.0
3CP17A_MACMU (Q8HYM9) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 30 8.0
4CP17A_MACFA (Q2XVA1) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVI... 30 8.0

>CP17A_PAPHU (Q9GLD2) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -3

Query: 595 VKLRKGRSTKARESYSTTMKLCGSRGGGNAAACAVFWQTRKGLSY-TLAFETDRDRNAAI 419
           V ++KG+    R   +T   L  +R G   A     WQ  + L+  T A   D D+    
Sbjct: 85  VLIKKGKDFSGRPQVTTLDILSNNRKGIAFADYGAHWQLHRRLAMATFALFKDGDQKLEK 144

Query: 418 MLARKFASNCNVVLTGPGDQV 356
           ++ ++ ++ C+++ T  G  +
Sbjct: 145 IICQEISTLCDMLATHNGQTI 165



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>CP17A_PAPCY (Q8HYN0) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -3

Query: 595 VKLRKGRSTKARESYSTTMKLCGSRGGGNAAACAVFWQTRKGLSY-TLAFETDRDRNAAI 419
           V ++KG+    R   +T   L  +R G   A     WQ  + L+  T A   D D+    
Sbjct: 85  VLIKKGKDFSGRPQVTTLDILSNNRKGIAFADYGAHWQLHRRLAMATFALFKDGDQKLEK 144

Query: 418 MLARKFASNCNVVLTGPGDQV 356
           ++ ++ ++ C+++ T  G  +
Sbjct: 145 IICQEISTLCDMLATHNGQTI 165



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>CP17A_MACMU (Q8HYM9) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -3

Query: 595 VKLRKGRSTKARESYSTTMKLCGSRGGGNAAACAVFWQTRKGLSY-TLAFETDRDRNAAI 419
           V ++KG+    R   +T   L  +R G   A     WQ  + L+  T A   D D+    
Sbjct: 85  VLIKKGKDFSGRPQVTTLDILSNNRKGIAFADYGAHWQLHRRLAMATFALFKDGDQKLEK 144

Query: 418 MLARKFASNCNVVLTGPGDQV 356
           ++ ++ ++ C+++ T  G  +
Sbjct: 145 IICQEISTLCDMLATHNGQTI 165



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>CP17A_MACFA (Q2XVA1) Cytochrome P450 17A1 (EC 1.14.99.9) (CYPXVII) (P450-C17)|
           (P450c17) (Steroid 17-alpha-hydroxylase/17,20 lyase)
          Length = 508

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = -3

Query: 595 VKLRKGRSTKARESYSTTMKLCGSRGGGNAAACAVFWQTRKGLSY-TLAFETDRDRNAAI 419
           V ++KG+    R   +T   L  +R G   A     WQ  + L+  T A   D D+    
Sbjct: 85  VLIKKGKDFSGRPQVTTLDILSNNRKGIAFADYGAHWQLHRRLAMATFALFKDGDQKLEK 144

Query: 418 MLARKFASNCNVVLTGPGDQV 356
           ++ ++ ++ C+++ T  G  +
Sbjct: 145 IICQEISTLCDMLATHNGQTI 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,619,046
Number of Sequences: 219361
Number of extensions: 1795019
Number of successful extensions: 5251
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5090
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6029593548
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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