| Clone Name | rbasd16f11 |
|---|---|
| Clone Library Name | barley_pub |
>CB029_MOUSE (Q9CWN7) Protein C2orf29 homolog| Length = 505 Score = 33.1 bits (74), Expect = 0.70 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = -3 Query: 372 TVARSSQPARLSFPSDQTSRTTTIHRPNSTITITKPTGPNRPMQKQNTRPKF*RPLPWHH 193 T +++S P+ LS P +S + S IT + +GP P++ + RP+F RP P H Sbjct: 229 TQSKASFPSILSDPDPDSSNSGFDSSVASRITESLVSGPKPPIES-HFRPEFIRPPPPLH 287 Query: 192 ACD 184 C+ Sbjct: 288 ICE 290
>CB029_HUMAN (Q9UKZ1) Protein C2orf29| Length = 510 Score = 32.7 bits (73), Expect = 0.92 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = -3 Query: 372 TVARSSQPARLSFPSDQTSRTTTIHRPNSTITITKPTGPNRPMQKQNTRPKF*RPLPWHH 193 T +++S P+ LS P +S + S IT +GP P++ + RP+F RP P H Sbjct: 234 TQSKASFPSILSDPDPDSSNSGFDSSVASQITEALVSGPKPPIES-HFRPEFIRPPPPLH 292 Query: 192 ACD 184 C+ Sbjct: 293 ICE 295
>P2RY2_RAT (P41232) P2Y purinoceptor 2 (P2Y2) (P2U purinoceptor 1) (P2U1) (ATP| receptor) (Purinergic receptor) Length = 374 Score = 32.0 bits (71), Expect = 1.6 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = -3 Query: 366 ARSSQPARLSFPSDQTSRTTTIHRPNSTITITK 268 AR ++PA PS Q R +HRPN T T+ K Sbjct: 316 ARDAKPATEPTPSPQARRKLGLHRPNRTDTVRK 348
>PHT19_ARATH (Q9S735) Inorganic phosphate transporter 1-9 (AtPht1;9) (H(+)/Pi| cotransporter) Length = 532 Score = 31.6 bits (70), Expect = 2.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 Query: 218 FRGHCHGIMLATAEFAMVARKPSFLWTSQH 129 FR CHGI A +F + FLW ++H Sbjct: 436 FRSTCHGISGAAGKFGAIVGTVGFLWATRH 465
>ESF1_YEAST (Q06344) Pre-rRNA processing protein ESF1 (18S rRNA factor 1)| Length = 628 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/46 (30%), Positives = 28/46 (60%) Frame = -1 Query: 632 RQKQKSKSKLNKECLRDSETNMKQQMPRNRANKLKFVRRSHRTAKE 495 R+K+K + K K+ +++ +KQQ +++ +KLK V + H +E Sbjct: 437 RRKEKERRKARKQKVKE----LKQQSEKDKKSKLKSVNKKHTNDEE 478
>IF5A4_LYCES (Q9AXQ3) Eukaryotic translation initiation factor 5A-4 (eIF-5A-4)| Length = 160 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/65 (26%), Positives = 29/65 (44%) Frame = -1 Query: 482 EVDPAAYPTPATRALY*RRRGWRLTAGRKCKLLSKGTLLQGHHSQQGCPFLATRHRGRRQ 303 + D A T +A R+ G+ + GR CK++ T G H C F+A ++ Sbjct: 11 KADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNAKK 70 Query: 302 FIDLI 288 D++ Sbjct: 71 LEDIV 75
>IF2_VIBVY (Q7MI09) Translation initiation factor IF-2| Length = 907 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = -1 Query: 626 KQKSKSKLNKECLRDSETNMKQQMPRNRANKLKFVRRSHRTAKEVSGEE 480 ++K+K + RD+E +KQ+ R A +LK RR AK + EE Sbjct: 168 EEKAKRDAEGKAKRDAEEKVKQEAARKEAEELK--RRQEEEAKRKAEEE 214
>IF2_VIBVU (Q8DBW0) Translation initiation factor IF-2| Length = 907 Score = 30.0 bits (66), Expect = 6.0 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = -1 Query: 626 KQKSKSKLNKECLRDSETNMKQQMPRNRANKLKFVRRSHRTAKEVSGEE 480 ++K+K + RD+E +KQ+ R A +LK RR AK + EE Sbjct: 168 EEKAKRDAEGKAKRDAEEKVKQEAARKEAEELK--RRQEEEAKRKAEEE 214
>IF5A3_LYCES (Q9AXQ4) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3)| Length = 159 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -1 Query: 482 EVDPAAYPTPATRALY*RRRGWRLTAGRKCKLLSKGTLLQGHHSQQGCPFLA 327 + D A T +A R+ G+ + GR CK++ T G H C F+A Sbjct: 11 KADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVA 62
>GRIPE_MOUSE (Q6GYP7) GTPase-activating RapGAP domain-like 1| (GAP-related-interacting partner to E12) (GRIPE) (Tuberin-like protein 1) Length = 2035 Score = 29.6 bits (65), Expect = 7.8 Identities = 17/63 (26%), Positives = 28/63 (44%) Frame = -2 Query: 286 NHNHHQTNWSEQADAKAEHQTQILEATAMASCLRLRSSPWLRGNLLSCGQVNTACHSTSX 107 NH T S + Q +L T + SC+++RS + G L+ G V+ + Sbjct: 1538 NHYSESTELSPELFESPNIQFFVLNNTTLVSCIQIRSEESMPGGGLAAGLVSANSNVRII 1597 Query: 106 LRD 98 +RD Sbjct: 1598 VRD 1600
>IF5A3_SOLTU (P56335) Eukaryotic translation initiation factor 5A-3 (eIF-5A-3)| (eIF-4D) Length = 160 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = -1 Query: 482 EVDPAAYPTPATRALY*RRRGWRLTAGRKCKLLSKGTLLQGHHSQQGCPFLA 327 + D A T +A R+ G+ + GR CK++ T G H C F+A Sbjct: 11 KADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVA 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,734,767 Number of Sequences: 219361 Number of extensions: 1548973 Number of successful extensions: 4523 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4522 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)