ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd16f04 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478319.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4222 Score = 375 bits (189), Expect = e-100 Identities = 400/469 (85%), Gaps = 1/469 (0%) Strand = Plus / Minus Query: 221 acccatcttcttgggcctcagatatgtcgagcctttcttcagacccggcatagagatctg 280 ||||||| | |||||||||| ||||||||||||||||||| ||||||||||| | || Sbjct: 3987 acccatccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatagaaacttg 3928 Query: 281 ctgctgctgcttggctctcttccgtcgctccctctccttctccatgagggctgcctccgc 340 |||||||||||| ||||||||| |||||||||||||||||| | | || ||||| || Sbjct: 3927 ctgctgctgcttagctctcttctctcgctccctctccttctcaagccgtgcggcctcggc 3868 Query: 341 ctgttcctgcctcagcttctccatctcctcttccatggccgtcttctcctccttctgcct 400 ||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 3867 ttgttcttgcctcagcttctccatctcctcctccatcgcggtcttgtcctccttctgcct 3808 Query: 401 cttcttgtggtccagcagggaggtgtccgtgtctttcacagagaagaacataggacccag 460 |||||| ||||| || || |||||||| || || || ||||||||||||||||| |||| Sbjct: 3807 cttcttatggtcgaggagcgaggtgtcggtttccttaacagagaagaacatagggcccaa 3748 Query: 461 ctctgccagccattgcggatccactgcgctcacacactgcatatactccttggttgtcag 520 |||||||||||| ||||| || || ||| | || |||||||| ||||| ||||| ||||| Sbjct: 3747 ctctgccagccactgcgggtcaacagcggtgacgcactgcatgtactctttggtcgtcag 3688 Query: 521 gacaagctcatggtacaccacatagtcaggggtgtacccgagaccatagagagcactgct 580 ||||||||||||||| || ||||||||||||||||| || || || ||||| |||||||| Sbjct: 3687 gacaagctcatggtagacaacatagtcaggggtgtaaccaaggccgtagagtgcactgct 3628 Query: 581 ggggtgcaggtggcacggcatcccattccggcagttgacatactctcctatgcccttcaa 640 |||||| |||||||| |||||||| ||||||||||| |||||||| || | |||||||| Sbjct: 3627 ggggtggaggtggcatggcatcccgttccggcagttcacatactccccgacacccttcaa 3568 Query: 641 ccttgccgagttatgggaagtatgccgagcagatagccttcctcaccac 689 ||| || | |||| |||||||||| |||||||| || || |||||||| Sbjct: 3567 cctcgcggcattat-ggaagtatgcagagcagatggcttttctcaccac 3520
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 375 bits (189), Expect = e-100 Identities = 400/469 (85%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 221 acccatcttcttgggcctcagatatgtcgagcctttcttcagacccggcatagagatctg 280 ||||||| | |||||||||| ||||||||||||||||||| ||||||||||| | || Sbjct: 19237579 acccatccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatagaaacttg 19237638 Query: 281 ctgctgctgcttggctctcttccgtcgctccctctccttctccatgagggctgcctccgc 340 |||||||||||| ||||||||| |||||||||||||||||| | | || ||||| || Sbjct: 19237639 ctgctgctgcttagctctcttctctcgctccctctccttctcaagccgtgcggcctcggc 19237698 Query: 341 ctgttcctgcctcagcttctccatctcctcttccatggccgtcttctcctccttctgcct 400 ||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 19237699 ttgttcttgcctcagcttctccatctcctcctccatcgcggtcttgtcctccttctgcct 19237758 Query: 401 cttcttgtggtccagcagggaggtgtccgtgtctttcacagagaagaacataggacccag 460 |||||| ||||| || || |||||||| || || || ||||||||||||||||| |||| Sbjct: 19237759 cttcttatggtcgaggagcgaggtgtcggtttccttaacagagaagaacatagggcccaa 19237818 Query: 461 ctctgccagccattgcggatccactgcgctcacacactgcatatactccttggttgtcag 520 |||||||||||| ||||| || || ||| | || |||||||| ||||| ||||| ||||| Sbjct: 19237819 ctctgccagccactgcgggtcaacagcggtgacgcactgcatgtactctttggtcgtcag 19237878 Query: 521 gacaagctcatggtacaccacatagtcaggggtgtacccgagaccatagagagcactgct 580 ||||||||||||||| || ||||||||||||||||| || || || ||||| |||||||| Sbjct: 19237879 gacaagctcatggtagacaacatagtcaggggtgtaaccaaggccgtagagtgcactgct 19237938 Query: 581 ggggtgcaggtggcacggcatcccattccggcagttgacatactctcctatgcccttcaa 640 |||||| |||||||| |||||||| ||||||||||| |||||||| || | |||||||| Sbjct: 19237939 ggggtggaggtggcatggcatcccgttccggcagttcacatactccccgacacccttcaa 19237998 Query: 641 ccttgccgagttatgggaagtatgccgagcagatagccttcctcaccac 689 ||| || | |||| |||||||||| |||||||| || || |||||||| Sbjct: 19237999 cctcgcggcattat-ggaagtatgcagagcagatggcttttctcaccac 19238046 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 agatctgctgctgctgcttgg 294 ||||||||||||||||||||| Sbjct: 12283 agatctgctgctgctgcttgg 12263
>dbj|AK073417.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J24, full insert sequence Length = 4222 Score = 375 bits (189), Expect = e-100 Identities = 400/469 (85%), Gaps = 1/469 (0%) Strand = Plus / Minus Query: 221 acccatcttcttgggcctcagatatgtcgagcctttcttcagacccggcatagagatctg 280 ||||||| | |||||||||| ||||||||||||||||||| ||||||||||| | || Sbjct: 3987 acccatccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatagaaacttg 3928 Query: 281 ctgctgctgcttggctctcttccgtcgctccctctccttctccatgagggctgcctccgc 340 |||||||||||| ||||||||| |||||||||||||||||| | | || ||||| || Sbjct: 3927 ctgctgctgcttagctctcttctctcgctccctctccttctcaagccgtgcggcctcggc 3868 Query: 341 ctgttcctgcctcagcttctccatctcctcttccatggccgtcttctcctccttctgcct 400 ||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 3867 ttgttcttgcctcagcttctccatctcctcctccatcgcggtcttgtcctccttctgcct 3808 Query: 401 cttcttgtggtccagcagggaggtgtccgtgtctttcacagagaagaacataggacccag 460 |||||| ||||| || || |||||||| || || || ||||||||||||||||| |||| Sbjct: 3807 cttcttatggtcgaggagcgaggtgtcggtttccttaacagagaagaacatagggcccaa 3748 Query: 461 ctctgccagccattgcggatccactgcgctcacacactgcatatactccttggttgtcag 520 |||||||||||| ||||| || || ||| | || |||||||| ||||| ||||| ||||| Sbjct: 3747 ctctgccagccactgcgggtcaacagcggtgacgcactgcatgtactctttggtcgtcag 3688 Query: 521 gacaagctcatggtacaccacatagtcaggggtgtacccgagaccatagagagcactgct 580 ||||||||||||||| || ||||||||||||||||| || || || ||||| |||||||| Sbjct: 3687 gacaagctcatggtagacaacatagtcaggggtgtaaccaaggccgtagagtgcactgct 3628 Query: 581 ggggtgcaggtggcacggcatcccattccggcagttgacatactctcctatgcccttcaa 640 |||||| |||||||| |||||||| ||||||||||| |||||||| || | |||||||| Sbjct: 3627 ggggtggaggtggcatggcatcccgttccggcagttcacatactccccgacacccttcaa 3568 Query: 641 ccttgccgagttatgggaagtatgccgagcagatagccttcctcaccac 689 ||| || | |||| |||||||||| |||||||| || || |||||||| Sbjct: 3567 cctcgcggcattat-ggaagtatgcagagcagatggcttttctcaccac 3520
>dbj|AP003815.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1163_G04 Length = 106253 Score = 375 bits (189), Expect = e-100 Identities = 400/469 (85%), Gaps = 1/469 (0%) Strand = Plus / Plus Query: 221 acccatcttcttgggcctcagatatgtcgagcctttcttcagacccggcatagagatctg 280 ||||||| | |||||||||| ||||||||||||||||||| ||||||||||| | || Sbjct: 13805 acccatccttttgggcctcaagtatgtcgagcctttcttcaagcccggcatagaaacttg 13864 Query: 281 ctgctgctgcttggctctcttccgtcgctccctctccttctccatgagggctgcctccgc 340 |||||||||||| ||||||||| |||||||||||||||||| | | || ||||| || Sbjct: 13865 ctgctgctgcttagctctcttctctcgctccctctccttctcaagccgtgcggcctcggc 13924 Query: 341 ctgttcctgcctcagcttctccatctcctcttccatggccgtcttctcctccttctgcct 400 ||||| ||||||||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct: 13925 ttgttcttgcctcagcttctccatctcctcctccatcgcggtcttgtcctccttctgcct 13984 Query: 401 cttcttgtggtccagcagggaggtgtccgtgtctttcacagagaagaacataggacccag 460 |||||| ||||| || || |||||||| || || || ||||||||||||||||| |||| Sbjct: 13985 cttcttatggtcgaggagcgaggtgtcggtttccttaacagagaagaacatagggcccaa 14044 Query: 461 ctctgccagccattgcggatccactgcgctcacacactgcatatactccttggttgtcag 520 |||||||||||| ||||| || || ||| | || |||||||| ||||| ||||| ||||| Sbjct: 14045 ctctgccagccactgcgggtcaacagcggtgacgcactgcatgtactctttggtcgtcag 14104 Query: 521 gacaagctcatggtacaccacatagtcaggggtgtacccgagaccatagagagcactgct 580 ||||||||||||||| || ||||||||||||||||| || || || ||||| |||||||| Sbjct: 14105 gacaagctcatggtagacaacatagtcaggggtgtaaccaaggccgtagagtgcactgct 14164 Query: 581 ggggtgcaggtggcacggcatcccattccggcagttgacatactctcctatgcccttcaa 640 |||||| |||||||| |||||||| ||||||||||| |||||||| || | |||||||| Sbjct: 14165 ggggtggaggtggcatggcatcccgttccggcagttcacatactccccgacacccttcaa 14224 Query: 641 ccttgccgagttatgggaagtatgccgagcagatagccttcctcaccac 689 ||| || | |||| |||||||||| |||||||| || || |||||||| Sbjct: 14225 cctcgcggcattat-ggaagtatgcagagcagatggcttttctcaccac 14272
>ref|NM_121304.2| Arabidopsis thaliana EMB3011; ATP binding / ATP-dependent helicase/ RNA helicase/ helicase/ nucleic acid binding AT5G13010 (EMB3011) mRNA, complete cds Length = 4051 Score = 89.7 bits (45), Expect = 1e-14 Identities = 150/185 (81%) Strand = Plus / Minus Query: 441 gagaagaacataggacccagctctgccagccattgcggatccactgcgctcacacactgc 500 |||||||||||||| || | ||| |||||||| ||||| || || | || |||||||| Sbjct: 3624 gagaagaacataggccctaactcagccagccaatgcggctcaaccgatgtcgcacactgc 3565 Query: 501 atatactccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccg 560 || |||||||| || |||| || || |||||||||||||||||||| || ||||| || Sbjct: 3564 atgtactcctttgtggtcaagatcagttcatggtacaccacatagtccggtgtgtatccc 3505 Query: 561 agaccatagagagcactgctggggtgcaggtggcacggcatcccattccggcagttgaca 620 ||||| || || |||||||| ||||||| ||||| |||||||| | | |||||| ||| Sbjct: 3504 agaccgtacagtgcactgctagggtgcaaatggcaaggcatcccggttctgcagttcaca 3445 Query: 621 tactc 625 ||||| Sbjct: 3444 tactc 3440
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project) Length = 82207 Score = 89.7 bits (45), Expect = 1e-14 Identities = 150/185 (81%) Strand = Plus / Minus Query: 441 gagaagaacataggacccagctctgccagccattgcggatccactgcgctcacacactgc 500 |||||||||||||| || | ||| |||||||| ||||| || || | || |||||||| Sbjct: 1760 gagaagaacataggccctaactcagccagccaatgcggctcaaccgatgtcgcacactgc 1701 Query: 501 atatactccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccg 560 || |||||||| || |||| || || |||||||||||||||||||| || ||||| || Sbjct: 1700 atgtactcctttgtggtcaagatcagttcatggtacaccacatagtccggtgtgtatccc 1641 Query: 561 agaccatagagagcactgctggggtgcaggtggcacggcatcccattccggcagttgaca 620 ||||| || || |||||||| ||||||| ||||| |||||||| | | |||||| ||| Sbjct: 1640 agaccgtacagtgcactgctagggtgcaaatggcaaggcatcccggttctgcagttcaca 1581 Query: 621 tactc 625 ||||| Sbjct: 1580 tactc 1576
>emb|AL353013.1|ATT24H18 Arabidopsis thaliana DNA chromosome 5, BAC clone T24H18 (ESSA project) Length = 90020 Score = 89.7 bits (45), Expect = 1e-14 Identities = 150/185 (81%) Strand = Plus / Minus Query: 441 gagaagaacataggacccagctctgccagccattgcggatccactgcgctcacacactgc 500 |||||||||||||| || | ||| |||||||| ||||| || || | || |||||||| Sbjct: 80251 gagaagaacataggccctaactcagccagccaatgcggctcaaccgatgtcgcacactgc 80192 Query: 501 atatactccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccg 560 || |||||||| || |||| || || |||||||||||||||||||| || ||||| || Sbjct: 80191 atgtactcctttgtggtcaagatcagttcatggtacaccacatagtccggtgtgtatccc 80132 Query: 561 agaccatagagagcactgctggggtgcaggtggcacggcatcccattccggcagttgaca 620 ||||| || || |||||||| ||||||| ||||| |||||||| | | |||||| ||| Sbjct: 80131 agaccgtacagtgcactgctagggtgcaaatggcaaggcatcccggttctgcagttcaca 80072 Query: 621 tactc 625 ||||| Sbjct: 80071 tactc 80067
>ref|XM_857960.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38, transcript variant 7 (LOC479669), mRNA Length = 3773 Score = 71.9 bits (36), Expect = 3e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||| | Sbjct: 3534 agaacatggggcccagctctgctagccactctccatccactgcggtcacacactgcatgt 3475 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 | |||||||| |||| ||| |||||||| || || | ||||| |||||||| || | | Sbjct: 3474 attccttggtggtcatgaccagctcatgatatactatgtagtctggggtgtagcccattc 3415 Query: 565 catagagagcactgctggggtgcaggtggcacggcatccc 604 || |||| | ||| ||||||||| |||||| |||||||| Sbjct: 3414 caaagagtgagctggtggggtgcaagtggcagggcatccc 3375
>ref|XM_857935.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38, transcript variant 6 (LOC479669), mRNA Length = 3818 Score = 71.9 bits (36), Expect = 3e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||| | Sbjct: 3579 agaacatggggcccagctctgctagccactctccatccactgcggtcacacactgcatgt 3520 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 | |||||||| |||| ||| |||||||| || || | ||||| |||||||| || | | Sbjct: 3519 attccttggtggtcatgaccagctcatgatatactatgtagtctggggtgtagcccattc 3460 Query: 565 catagagagcactgctggggtgcaggtggcacggcatccc 604 || |||| | ||| ||||||||| |||||| |||||||| Sbjct: 3459 caaagagtgagctggtggggtgcaagtggcagggcatccc 3420
>ref|XM_857909.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38, transcript variant 5 (LOC479669), mRNA Length = 3800 Score = 71.9 bits (36), Expect = 3e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||| | Sbjct: 3561 agaacatggggcccagctctgctagccactctccatccactgcggtcacacactgcatgt 3502 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 | |||||||| |||| ||| |||||||| || || | ||||| |||||||| || | | Sbjct: 3501 attccttggtggtcatgaccagctcatgatatactatgtagtctggggtgtagcccattc 3442 Query: 565 catagagagcactgctggggtgcaggtggcacggcatccc 604 || |||| | ||| ||||||||| |||||| |||||||| Sbjct: 3441 caaagagtgagctggtggggtgcaagtggcagggcatccc 3402
>ref|XM_857885.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38, transcript variant 4 (LOC479669), mRNA Length = 3794 Score = 71.9 bits (36), Expect = 3e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||| | Sbjct: 3555 agaacatggggcccagctctgctagccactctccatccactgcggtcacacactgcatgt 3496 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 | |||||||| |||| ||| |||||||| || || | ||||| |||||||| || | | Sbjct: 3495 attccttggtggtcatgaccagctcatgatatactatgtagtctggggtgtagcccattc 3436 Query: 565 catagagagcactgctggggtgcaggtggcacggcatccc 604 || |||| | ||| ||||||||| |||||| |||||||| Sbjct: 3435 caaagagtgagctggtggggtgcaagtggcagggcatccc 3396
>ref|XM_857865.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38, transcript variant 3 (LOC479669), mRNA Length = 3680 Score = 71.9 bits (36), Expect = 3e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||| | Sbjct: 3441 agaacatggggcccagctctgctagccactctccatccactgcggtcacacactgcatgt 3382 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 | |||||||| |||| ||| |||||||| || || | ||||| |||||||| || | | Sbjct: 3381 attccttggtggtcatgaccagctcatgatatactatgtagtctggggtgtagcccattc 3322 Query: 565 catagagagcactgctggggtgcaggtggcacggcatccc 604 || |||| | ||| ||||||||| |||||| |||||||| Sbjct: 3321 caaagagtgagctggtggggtgcaagtggcagggcatccc 3282
>ref|XM_536800.2| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38, transcript variant 1 (LOC479669), mRNA Length = 3778 Score = 71.9 bits (36), Expect = 3e-09 Identities = 129/160 (80%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||| ||||| | |||||||||| ||||||||||||| | Sbjct: 3534 agaacatggggcccagctctgctagccactctccatccactgcggtcacacactgcatgt 3475 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 | |||||||| |||| ||| |||||||| || || | ||||| |||||||| || | | Sbjct: 3474 attccttggtggtcatgaccagctcatgatatactatgtagtctggggtgtagcccattc 3415 Query: 565 catagagagcactgctggggtgcaggtggcacggcatccc 604 || |||| | ||| ||||||||| |||||| |||||||| Sbjct: 3414 caaagagtgagctggtggggtgcaagtggcagggcatccc 3375
>dbj|AK172917.1| Mus musculus premature mRNA for mKIAA0224 protein Length = 4197 Score = 71.9 bits (36), Expect = 3e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | |||||| ||| ||||||||||||| | Sbjct: 3571 agaacatggggcccagctcggccagccactctccatccacagcggtcacacactgcatgt 3512 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgta 556 |||||||||| |||| ||| ||||| || ||||| | |||||||||||||| Sbjct: 3511 actccttggtggtcatgaccagctcgtgatacacaatgtagtcaggggtgta 3460
>gb|BC046557.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 38, mRNA (cDNA clone MGC:51405 IMAGE:4511193), complete cds Length = 4217 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 479 atccactgcgctcacacactgcatatactccttggttgtcaggacaagctcatggtacac 538 |||||| ||| ||||||||||||| ||||||||||| |||| ||| ||||| || ||||| Sbjct: 3542 atccacagcggtcacacactgcatgtactccttggtggtcatgaccagctcgtgatacac 3483 Query: 539 cacatagtcaggggtgta 556 | |||||||||||||| Sbjct: 3482 aatgtagtcaggggtgta 3465
>gb|BC024489.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 38, mRNA (cDNA clone IMAGE:4981492), partial cds Length = 1742 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 479 atccactgcgctcacacactgcatatactccttggttgtcaggacaagctcatggtacac 538 |||||| ||| ||||||||||||| ||||||||||| |||| ||| ||||| || ||||| Sbjct: 1051 atccacagcggtcacacactgcatgtactccttggtggtcatgaccagctcgtgatacac 992 Query: 539 cacatagtcaggggtgta 556 | |||||||||||||| Sbjct: 991 aatgtagtcaggggtgta 974
>dbj|AK153917.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005B08 product:Pre-mRNA splicing factor ATP-dependent RNA helicase PRP16 (ATP- dependent RNA helicase DHX38) (DEAH-box protein 38) homolog [Homo sapiens], full insert sequence Length = 4216 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 479 atccactgcgctcacacactgcatatactccttggttgtcaggacaagctcatggtacac 538 |||||| ||| ||||||||||||| ||||||||||| |||| ||| ||||| || ||||| Sbjct: 3561 atccacagcggtcacacactgcatgtactccttggtggtcatgaccagctcgtgatacac 3502 Query: 539 cacatagtcaggggtgta 556 | |||||||||||||| Sbjct: 3501 aatgtagtcaggggtgta 3484
>ref|NM_178380.1| Mus musculus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (Dhx38), mRNA Length = 4190 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 479 atccactgcgctcacacactgcatatactccttggttgtcaggacaagctcatggtacac 538 |||||| ||| ||||||||||||| ||||||||||| |||| ||| ||||| || ||||| Sbjct: 3542 atccacagcggtcacacactgcatgtactccttggtggtcatgaccagctcgtgatacac 3483 Query: 539 cacatagtcaggggtgta 556 | |||||||||||||| Sbjct: 3482 aatgtagtcaggggtgta 3465
>ref|XM_238048.3| PREDICTED: Rattus norvegicus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (predicted) (Dhx38_predicted), mRNA Length = 4200 Score = 63.9 bits (32), Expect = 7e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | |||||| ||| ||||||||||||| | Sbjct: 3576 agaacatggggcccagctccgccagccactctccatccacggcggtcacacactgcatgt 3517 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgta 556 |||||||||| |||| ||| ||||| || || || | |||||||||||||| Sbjct: 3516 actccttggtggtcatgaccagctcgtgatatacaatgtagtcaggggtgta 3465
>gb|U89410.1|MMU89410 Mus musculus strain BALB/c putative RNA helicase mRNA, partial cds Length = 630 Score = 63.9 bits (32), Expect = 7e-07 Identities = 66/78 (84%) Strand = Plus / Minus Query: 479 atccactgcgctcacacactgcatatactccttggttgtcaggacaagctcatggtacac 538 |||||| ||| ||||||||||||| ||||||||||| |||| ||| ||||| || ||||| Sbjct: 429 atccacagcggtcacacactgcatgtactccttggtggtcatgaccagctcgtgatacac 370 Query: 539 cacatagtcaggggtgta 556 | || ||||||||||| Sbjct: 369 watgtartcaggggtgta 352
>ref|XM_511101.1| PREDICTED: Pan troglodytes similar to Dhx38 protein (LOC454237), mRNA Length = 2031 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 1475 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 1416 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 1415 actccttggtggtca 1401
>gb|BC008340.1| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 38, mRNA (cDNA clone MGC:15850 IMAGE:3508917), complete cds Length = 4244 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 3576 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 3517 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 3516 actccttggtggtca 3502
>gb|BC004235.2| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 38, mRNA (cDNA clone MGC:757 IMAGE:3504632), complete cds Length = 4246 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 3576 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 3517 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 3516 actccttggtggtca 3502
>ref|NM_014003.3| Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 38 (DHX38), mRNA Length = 4470 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 3800 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 3741 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 3740 actccttggtggtca 3726
>emb|CR598207.1| full-length cDNA clone CS0DE012YL20 of Placenta of Homo sapiens (human) Length = 2110 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 1471 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 1412 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 1411 actccttggtggtca 1397
>gb|AF305070.2|AF305070 Chlamydomonas reinhardtii DEAH-box RNA helicase (Mut6) mRNA, complete cds Length = 4299 Score = 61.9 bits (31), Expect = 3e-06 Identities = 127/159 (79%) Strand = Plus / Minus Query: 443 gaagaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcat 502 ||||||||| || |||||||| |||||||| | || ||||| || ||||||||||||| Sbjct: 4053 gaagaacatgggccccagctccgccagccactcgggctccacagcagtcacacactgcat 3994 Query: 503 atactccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgag 562 ||||||||||| || | || ||||| |||||||| | ||||| || ||| | || || Sbjct: 3993 gtactccttggtggtgaacaccagctcgtggtacacgatgtagtcgggagtgaagcccag 3934 Query: 563 accatagagagcactgctggggtgcaggtggcacggcat 601 || || || ||| |||||||||||||||||| ||||| Sbjct: 3933 cccgtacagggcagagctggggtgcaggtggcagggcat 3895
>dbj|D86977.1| Homo sapiens mRNA for KIAA0224 gene, partial cds Length = 4226 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 3581 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 3522 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 3521 actccttggtggtca 3507
>gb|AF038391.1|AF038391 Homo sapiens pre-mRNA splicing factor (PRP16) mRNA, complete cds Length = 3703 Score = 61.9 bits (31), Expect = 3e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 3452 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 3393 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 3392 actccttggtggtca 3378
>gb|BC063744.1| Danio rerio zgc:63517, mRNA (cDNA clone MGC:63517 IMAGE:2644058), complete cds Length = 4541 Score = 56.0 bits (28), Expect = 2e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | ||||||||| ||||||||||||| | Sbjct: 3734 agaacattggtcccagctcagccagccactcaccatccactgccgtcacacactgcatgt 3675 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgta 556 ||||||| || |||| ||| || |||||||| | | |||||||||||||| Sbjct: 3674 actcctttgtggtcatgaccagttcatggtagatgatgtagtcaggggtgta 3623
>ref|NM_200876.1| Danio rerio zgc:63517 (zgc:63517), mRNA Length = 4541 Score = 56.0 bits (28), Expect = 2e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | ||||||||| ||||||||||||| | Sbjct: 3734 agaacattggtcccagctcagccagccactcaccatccactgccgtcacacactgcatgt 3675 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgta 556 ||||||| || |||| ||| || |||||||| | | |||||||||||||| Sbjct: 3674 actcctttgtggtcatgaccagttcatggtagatgatgtagtcaggggtgta 3623
>ref|XM_697299.1| PREDICTED: Danio rerio hypothetical protein LOC554460 (LOC554460), mRNA Length = 3662 Score = 56.0 bits (28), Expect = 2e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | ||||||||| ||||||||||||| | Sbjct: 2868 agaacattggtcccagctcagccagccactcaccatccactgccgtcacacactgcatgt 2809 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgta 556 ||||||| || |||| ||| || |||||||| | | |||||||||||||| Sbjct: 2808 actcctttgtggtcatgaccagttcatggtagatgatgtagtcaggggtgta 2757
>gb|AC004682.1|HUAC004682 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-259H10, complete sequence Length = 189134 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 137265 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 137324 Query: 505 actcct 510 |||||| Sbjct: 137325 actcct 137330
>gb|AC009087.4|AC009087 Homo sapiens chromosome 16 clone RP11-384M15, complete sequence Length = 174933 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| ||||||||||||||| Sbjct: 7900 agaacatggggcccagctccgccagccactccccgtccacagcggtcacacactgcatat 7959 Query: 505 actcct 510 |||||| Sbjct: 7960 actcct 7965
>ref|XM_598276.2| PREDICTED: Bos taurus similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38 (LOC520046), mRNA Length = 4289 Score = 50.1 bits (25), Expect = 0.010 Identities = 124/157 (78%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || ||||||||||||||||| | ||||| || ||||||||||||| | Sbjct: 3658 agaacatggggcccagctctgccagccactctccgtccacggcagtcacacactgcatgt 3599 Query: 505 actccttggttgtcaggacaagctcatggtacaccacatagtcaggggtgtacccgagac 564 |||||||||| |||| ||| | ||| || ||||| | ||||| |||||||| || | | Sbjct: 3598 actccttggtggtcatgaccaactcgtgatacacaatgtagtcgggggtgtagcccattc 3539 Query: 565 catagagagcactgctggggtgcaggtggcacggcat 601 || |||| | ||| | |||||||||||||| ||||| Sbjct: 3538 caaagagggagctggtagggtgcaggtggcagggcat 3502
>ref|XM_964523.1| PREDICTED: Tribolium castaneum similar to CG32604-PA, isoform A (LOC658113), mRNA Length = 3519 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 580 tggggtgcaggtggcacggcatcccattccggcagttgacatactctcctatgcccttca 639 |||||||||||||||| ||||| || | ||||| ||||| ||||| || |||||||||| Sbjct: 3169 tggggtgcaggtggcagggcatgcccgtacggcaattgacgtactcgccgatgcccttca 3110 Query: 640 a 640 | Sbjct: 3109 a 3109
>gb|AC114147.5| Rattus norvegicus BAC CH230-144F3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 214988 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||||||||||||||| Sbjct: 189075 tcttctcctccttctgcctcttct 189098
>emb|CR848116.2| Xenopus tropicalis finished cDNA, clone TGas001m02 Length = 1570 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 447 aacataggacccagctctgccagccatt 474 ||||| |||||||||||||||||||||| Sbjct: 1439 aacattggacccagctctgccagccatt 1412
>gb|AC101841.5| Mus musculus chromosome 1, clone RP23-251G19, complete sequence Length = 174900 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Minus Query: 211 ttatctacaaacccatcttcttgggcctcagatatg 246 |||||||| ||||||||||| |||||| |||||||| Sbjct: 123410 ttatctactaacccatcttcctgggccacagatatg 123375
>ref|NM_212496.1| Rattus norvegicus DEAH (Asp-Glu-Ala-His) box polypeptide 16 (Dhx16), mRNA Length = 3349 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 505 actccttggttgtcaggacaagctcatggta 535 |||||||||| |||| ||||||||||||||| Sbjct: 3103 actccttggtggtcaagacaagctcatggta 3073
>ref|XM_781385.1| PREDICTED: Strongylocentrotus purpuratus similar to DEAH (Asp-Glu-Ala-His) box polypeptide 38 (LOC581380), mRNA Length = 3576 Score = 46.1 bits (23), Expect = 0.15 Identities = 74/91 (81%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 |||||||||| |||||||| |||| ||| | | |||||||| ||||||||||||| | Sbjct: 3337 agaacataggtcccagctcagccaaccactccccctccactgctgtcacacactgcatgt 3278 Query: 505 actccttggttgtcaggacaagctcatggta 535 | ||||| | |||| ||| ||||||||||| Sbjct: 3277 attcctttgaggtcatgaccagctcatggta 3247 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 618 acatactctcctatgccctt 637 |||||||||||||||||||| Sbjct: 3164 acatactctcctatgccctt 3145
>emb|BX883048.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 7/11 Length = 349943 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Minus Query: 505 actccttggttgtcaggacaagctcatggta 535 |||||||||| |||| ||||||||||||||| Sbjct: 111000 actccttggtggtcaagacaagctcatggta 110970
>emb|CR861244.1| Pongo pygmaeus mRNA; cDNA DKFZp459H043 (from clone DKFZp459H043) Length = 4119 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 507 tccttggttgtcaggacaagctcatggtacaccac 541 |||||||| ||||| || ||||||||||||||||| Sbjct: 3451 tccttggtggtcagcaccagctcatggtacaccac 3417
>emb|CR860788.1| Pongo pygmaeus mRNA; cDNA DKFZp459M216 (from clone DKFZp459M216) Length = 4232 Score = 46.1 bits (23), Expect = 0.15 Identities = 62/75 (82%) Strand = Plus / Minus Query: 445 agaacataggacccagctctgccagccattgcggatccactgcgctcacacactgcatat 504 ||||||| || |||||||| |||||||| | | ||||| ||| |||| |||||||| | Sbjct: 3647 agaacatggggcccagctccgccagccactccccgtccacagcggtcacgcactgcatgt 3588 Query: 505 actccttggttgtca 519 |||||||||| |||| Sbjct: 3587 actccttggtggtca 3573
>ref|NM_001030582.1| Gallus gallus DEAH (Asp-Glu-Ala-His) box polypeptide 38 (DHX38), mRNA Length = 4145 Score = 44.1 bits (22), Expect = 0.61 Identities = 88/110 (80%) Strand = Plus / Minus Query: 492 acacactgcatatactccttggttgtcaggacaagctcatggtacaccacatagtcaggg 551 ||||||||||| || |||||||| |||| ||| |||||||| || || | ||||| || Sbjct: 3670 acacactgcatgtattccttggtggtcatgaccagctcatgataaacaatgtagtctgga 3611 Query: 552 gtgtacccgagaccatagagagcactgctggggtgcaggtggcacggcat 601 ||||| || | ||| |||| | ||| |||||||||||||||| ||||| Sbjct: 3610 gtgtagcccatgccaaagagggagctggtggggtgcaggtggcaaggcat 3561
>ref|XM_530144.1| PREDICTED: Pan troglodytes LOC457033 (LOC457033), mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ctccttctccatgagggctgcc 335 |||||||||||||||||||||| Sbjct: 180 ctccttctccatgagggctgcc 201
>gb|AC121835.2| Mus musculus BAC clone RP24-72L18 from 8, complete sequence Length = 225065 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 cttggctctcttccgtcgctcc 311 |||||||||||||||||||||| Sbjct: 106383 cttggctctcttccgtcgctcc 106404
>emb|CR716996.2|CNS0GG6L Tetraodon nigroviridis full-length cDNA Length = 1106 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 499 gcatatactccttggttgtcaggacaagctcatggtacacca 540 |||| ||||||||||| |||||||| ||||| ||||| |||| Sbjct: 769 gcatgtactccttggtggtcaggaccagctcgtggtaaacca 728
>emb|CR656863.2|CNS0F5T1 Tetraodon nigroviridis full-length cDNA Length = 1121 Score = 44.1 bits (22), Expect = 0.61 Identities = 37/42 (88%) Strand = Plus / Minus Query: 499 gcatatactccttggttgtcaggacaagctcatggtacacca 540 |||| ||||||||||| |||||||| ||||| ||||| |||| Sbjct: 294 gcatgtactccttggtggtcaggaccagctcgtggtaaacca 253
>ref|XM_788298.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8241-PA (LOC588623), mRNA Length = 240 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 507 tccttggttgtcaggacaagctcatg 532 |||||||||||||| ||||||||||| Sbjct: 53 tccttggttgtcagcacaagctcatg 28
>emb|AL049796.28|HSJ561L24 Human DNA sequence from clone RP4-561L24 on chromosome 1p22-31.1 Contains the 5' end of a novel gene, the 5' end of a variant of the BCAR3 gene for breast cancer anti-estrogen resistance 3, the gene for acidic 82 kDa protein mRNA (HSU15552), the 3' end of the GCLM gene for glutamate-cysteine ligase modifier subunit and a CpG island, complete sequence Length = 125823 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ctccttctccatgagggctgcc 335 |||||||||||||||||||||| Sbjct: 75153 ctccttctccatgagggctgcc 75174
>ref|XM_786016.1| PREDICTED: Strongylocentrotus purpuratus similar to CG8241-PA (LOC586225), mRNA Length = 591 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 507 tccttggttgtcaggacaagctcatg 532 |||||||||||||| ||||||||||| Sbjct: 176 tccttggttgtcagcacaagctcatg 151
>emb|AJ719786.1| Gallus gallus mRNA for hypothetical protein, clone 6i5 Length = 4145 Score = 44.1 bits (22), Expect = 0.61 Identities = 88/110 (80%) Strand = Plus / Minus Query: 492 acacactgcatatactccttggttgtcaggacaagctcatggtacaccacatagtcaggg 551 ||||||||||| || |||||||| |||| ||| |||||||| || || | ||||| || Sbjct: 3670 acacactgcatgtattccttggtggtcatgaccagctcatgataaacaatgtagtctgga 3611 Query: 552 gtgtacccgagaccatagagagcactgctggggtgcaggtggcacggcat 601 ||||| || | ||| |||| | ||| |||||||||||||||| ||||| Sbjct: 3610 gtgtagcccatgccaaagagggagctggtggggtgcaggtggcaaggcat 3561
>ref|NM_132421.2| Drosophila melanogaster CG1826-RA (CG1826), mRNA Length = 2984 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 376 tggccgtcttctcctccttctgcctcttct 405 |||||||||||| |||||||| |||||||| Sbjct: 1955 tggccgtcttcttctccttctccctcttct 1926
>gb|AY069308.1| Drosophila melanogaster LD01947 full length cDNA Length = 2988 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 376 tggccgtcttctcctccttctgcctcttct 405 |||||||||||| |||||||| |||||||| Sbjct: 1944 tggccgtcttcttctccttctccctcttct 1915
>gb|AC106045.5| Homo sapiens BAC clone RP11-29H20 from 4, complete sequence Length = 183003 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 342 tgttcctgcctcagcttctcca 363 |||||||||||||||||||||| Sbjct: 78493 tgttcctgcctcagcttctcca 78514
>emb|BX935664.1| Gallus gallus finished cDNA, clone ChEST759l16 Length = 1035 Score = 44.1 bits (22), Expect = 0.61 Identities = 88/110 (80%) Strand = Plus / Minus Query: 492 acacactgcatatactccttggttgtcaggacaagctcatggtacaccacatagtcaggg 551 ||||||||||| || |||||||| |||| ||| |||||||| || || | ||||| || Sbjct: 574 acacactgcatgtattccttggtggtcatgaccagctcatgataaacaatgtagtctgga 515 Query: 552 gtgtacccgagaccatagagagcactgctggggtgcaggtggcacggcat 601 ||||| || | ||| |||| | ||| |||||||||||||||| ||||| Sbjct: 514 gtgtagcccatgccaaagagggagctggtggggtgcaggtggcaaggcat 465
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 44.1 bits (22), Expect = 0.61 Identities = 28/30 (93%) Strand = Plus / Minus Query: 376 tggccgtcttctcctccttctgcctcttct 405 |||||||||||| |||||||| |||||||| Sbjct: 283873 tggccgtcttcttctccttctccctcttct 283844
>gb|AC102616.7| Mus musculus chromosome 18, clone RP23-425L21, complete sequence Length = 192276 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 180113 tcttctcctccttcttcctcttctt 180137
>ref|NM_113688.1| Arabidopsis thaliana unknown protein AT3G27720 mRNA, complete cds Length = 1482 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 cgtcttctcctccttctgcctcttc 404 ||||||||||||||||| ||||||| Sbjct: 334 cgtcttctcctccttcttcctcttc 310 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 cgtcttctcctccttctgcctcttc 404 ||||||||||||||||| ||||||| Sbjct: 307 cgtcttctcctccttcttcctcttc 283
>gb|AY753669.1| Enterobacteria phage D6 immC region, complete sequence Length = 7644 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 460 gctctgccagccattgcggat 480 ||||||||||||||||||||| Sbjct: 1910 gctctgccagccattgcggat 1890
>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence Length = 198815 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 85029 tcttctcctccttcttcctcttctt 85005
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 522 acaagctcatggtacaccacatagtcagg 550 ||||||||||| ||||| ||||||||||| Sbjct: 654959 acaagctcatgatacacaacatagtcagg 654931
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 agcttctccatctcctcttcc 374 ||||||||||||||||||||| Sbjct: 1574842 agcttctccatctcctcttcc 1574862
>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 237425 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctcttccatgg 378 ||||||||||| | ||||||||||||||| Sbjct: 191916 cctcagcttcttcctctcctcttccatgg 191888
>gb|BC076273.1| Danio rerio zgc:92801, mRNA (cDNA clone MGC:92801 IMAGE:7088874), complete cds Length = 999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctcctccttctgcctcttctt 406 ||||||||||||||||||||| Sbjct: 591 ctcctccttctgcctcttctt 571
>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence Length = 192042 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||| ||||||||||||||| Sbjct: 66118 tcttctccttcttctgcctcttctt 66094
>ref|XM_570944.1| Cryptococcus neoformans var. neoformans JEC21 pre-mRNA splicing factor (CNE02430) partial mRNA Length = 3786 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 522 acaagctcatggtacaccacatagtcagg 550 ||||||||||| ||||| ||||||||||| Sbjct: 3446 acaagctcatgatacacaacatagtcagg 3418
>gb|AC127259.3| Mus musculus BAC clone RP24-304A20 from chromosome 9, complete sequence Length = 162717 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 76841 tcttctcctccttcttcctcttctt 76817
>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence Length = 245002 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 77431 tcttctcctccttcttcctcttctt 77407
>ref|NM_001002535.1| Danio rerio zgc:92801 (zgc:92801), mRNA Length = 999 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctcctccttctgcctcttctt 406 ||||||||||||||||||||| Sbjct: 591 ctcctccttctgcctcttctt 571
>gb|AC087487.14| Homo sapiens chromosome 15, clone RP11-698F12, complete sequence Length = 180232 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 355 gcttctccatctcctcttcca 375 ||||||||||||||||||||| Sbjct: 80913 gcttctccatctcctcttcca 80893
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome Length = 2225959 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 1977272 cctcagcttctccatctcctc 1977252
>gb|AC116991.2| Homo sapiens chromosome 3 clone RP11-264M9, complete sequence Length = 152794 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 gccgtcttctcctccttctgcctcttctt 406 |||||||| |||||||||||||| ||||| Sbjct: 124291 gccgtcttgtcctccttctgccttttctt 124319
>gb|AC104302.2| Homo sapiens chromosome 3 clone RP11-379L20, complete sequence Length = 206872 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 378 gccgtcttctcctccttctgcctcttctt 406 |||||||| |||||||||||||| ||||| Sbjct: 174299 gccgtcttgtcctccttctgccttttctt 174271
>gb|AC079160.5| Homo sapiens BAC clone RP11-176K15 from 4, complete sequence Length = 147727 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cccggcatagagatctgctgctgct 288 ||||||| ||||||||||||||||| Sbjct: 134341 cccggcacagagatctgctgctgct 134365
>dbj|AK163577.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230388O20 product:Hypothetical glycine-rich region containing protein (Fragment) homolog [Mus musculus], full insert sequence Length = 1986 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 109 cctcagcttctccatctcctc 89
>ref|XM_690642.1| PREDICTED: Danio rerio similar to Nucleobindin 1 precursor (CALNUC) (LOC567349), mRNA Length = 2058 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttcttgtggtcca 414 ||||||||||||||| |||||||| ||||||| Sbjct: 672 tcttctcctccttctccctcttctcctggtcca 640
>emb|BX248234.13| Zebrafish DNA sequence from clone DKEY-13E15 in linkage group 16, complete sequence Length = 220538 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 ctcctccttctgcctcttctt 406 ||||||||||||||||||||| Sbjct: 214862 ctcctccttctgcctcttctt 214842
>dbj|AK030682.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430428O07 product:hypothetical Glycine-rich region containing protein, full insert sequence Length = 3792 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 1482 cctcagcttctccatctcctc 1462
>dbj|AK018139.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330407J23 product:6330407J23RIK PROTEIN (FRAGMENT), full insert sequence Length = 2466 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 139 cctcagcttctccatctcctc 119
>dbj|AK044134.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830093L24 product:hypothetical protein, full insert sequence Length = 778 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 464 cctcagcttctccatctcctc 444
>gb|AC153375.3| Mus musculus 6 BAC RP23-353E9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198876 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 5340 tcttctcctccttctccctcttctt 5364
>gb|AC024164.6|AC024164 Homo sapiens chromosome 3 clone RP11-350A17 map 3p, complete sequence Length = 152580 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 94859 tcttctcctccttcttcctcttctt 94835
>ref|XM_394126.2| PREDICTED: Apis mellifera similar to CG7509-PA (LOC410649), mRNA Length = 2307 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 333 gcctccgcctgttcctgcctc 353 ||||||||||||||||||||| Sbjct: 303 gcctccgcctgttcctgcctc 283
>dbj|AB054296.2| Oryzias latipes OlGC2 gene for membrane guanylyl cyclase OlGC2, complete cds Length = 27582 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctct 402 ||||||||||||||||||||| Sbjct: 20213 tcttctcctccttctgcctct 20233
>gb|AC066598.5|AC066598 Homo sapiens chromosome 3 clone RP11-542K24 map 3p, complete sequence Length = 142190 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 134093 tcttctcctccttcttcctcttctt 134117
>gb|AC092095.39| Mus musculus strain C57BL/6J chromosome 10 clone rp23-34f16, complete sequence Length = 210694 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 166173 cctcagcttctccatctcctc 166153
>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1026C12 Length = 170240 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 agatctgctgctgctgcttgg 294 ||||||||||||||||||||| Sbjct: 11582 agatctgctgctgctgcttgg 11562
>dbj|AB018114.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGF10 Length = 84702 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 cgtcttctcctccttctgcctcttc 404 ||||||||||||||||| ||||||| Sbjct: 47160 cgtcttctcctccttcttcctcttc 47136 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 cgtcttctcctccttctgcctcttc 404 ||||||||||||||||| ||||||| Sbjct: 47133 cgtcttctcctccttcttcctcttc 47109
>gb|BC066079.1| Mus musculus RIKEN cDNA 6330407J23 gene, mRNA (cDNA clone MGC:91342 IMAGE:30355520), complete cds Length = 4152 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 1766 cctcagcttctccatctcctc 1746
>gb|AF132809.1|AF132809 Drosophila virilis achaete-scute complex enhancer sequence Length = 6134 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 341 ctgttcctgcctcagcttctc 361 ||||||||||||||||||||| Sbjct: 877 ctgttcctgcctcagcttctc 857
>emb|BX005066.3| Zebrafish DNA sequence from clone CH211-152F23 in linkage group 3, complete sequence Length = 172909 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttcttgtggtcca 414 ||||||||||||||| |||||||| ||||||| Sbjct: 54236 tcttctcctccttctccctcttctcctggtcca 54204
>gb|AC166074.3| Mus musculus BAC clone RP23-152H18 from chromosome 13, complete sequence Length = 224712 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 85317 tcttctcctccttcttcctcttctt 85341
>emb|AJ510207.1|ATH510207 Arabidopsis thaliana partial ari4 pseudogene, exon 1 Length = 1746 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 cgtcttctcctccttctgcctcttc 404 ||||||||||||||||| ||||||| Sbjct: 424 cgtcttctcctccttcttcctcttc 400 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 380 cgtcttctcctccttctgcctcttc 404 ||||||||||||||||| ||||||| Sbjct: 397 cgtcttctcctccttcttcctcttc 373
>ref|NM_026138.1| Mus musculus RIKEN cDNA 6330407J23 gene (6330407J23Rik), mRNA Length = 4152 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 350 cctcagcttctccatctcctc 370 ||||||||||||||||||||| Sbjct: 1766 cctcagcttctccatctcctc 1746
>gb|AC135293.3| Mus musculus BAC clone RP23-206K5 from 6, complete sequence Length = 197573 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 161039 tcttctcctccttctccctcttctt 161063
>gb|AC084069.28| Mus musculus strain C57BL/6J chromosome 13 clone rp23-257b17, complete sequence Length = 222775 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 102999 tcttctcctccttcttcctcttctt 102975
>dbj|AP008222.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, fosmid clone:OSJNOa219C16 Length = 39990 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 agatctgctgctgctgcttgg 294 ||||||||||||||||||||| Sbjct: 12283 agatctgctgctgctgcttgg 12263
>emb|AL928911.7| Mouse DNA sequence from clone RP23-271N3 on chromosome 2, complete sequence Length = 93455 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 ctcctccttctgcctcttctt 406 ||||||||||||||||||||| Sbjct: 25589 ctcctccttctgcctcttctt 25609
>gb|AC087589.3| Homo sapiens chromosome 3 clone RP11-1102N22 map 3p, complete sequence Length = 181736 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttctt 406 ||||||||||||||| ||||||||| Sbjct: 110565 tcttctcctccttcttcctcttctt 110541
>gb|AC168206.7| Mus musculus chromosome 1, clone RP23-17B20, complete sequence Length = 245358 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||| |||||||| Sbjct: 84905 tcttctcctccttcttcctcttct 84882
>ref|XM_483803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1635 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 10 agagatctgctgctgctgct 29
>ref|XM_518732.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 6330407J23 (LOC462989), mRNA Length = 2874 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 1077 cagcttctccatctcctctt 1058
>ref|NM_013530.1| Mus musculus guanine nucleotide binding protein, beta 3 (Gnb3), mRNA Length = 1887 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 415 tcctgcctcagctgctccatctcc 392
>gb|U92824.1| Homo sapiens clone 429-3 CTG trinucleotide repeat gene, partial sequence Length = 209 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 122 agagatctgctgctgctgct 141
>gb|U80735.1|HSU80735 Homo sapiens CAGF28 mRNA, partial cds Length = 2732 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 706 agagatctgctgctgctgct 687
>gb|AC166112.2| Mus musculus BAC clone RP23-63L7 from chromosome 9, complete sequence Length = 243289 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gcctccgcctgttcctgcct 352 |||||||||||||||||||| Sbjct: 115736 gcctccgcctgttcctgcct 115755
>gb|AC150650.5| Bos taurus BAC CH240-447L3 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 148126 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 116341 agagatctgctgctgctgct 116322
>gb|BC073640.1| Xenopus laevis MGC82975 protein, mRNA (cDNA clone MGC:82975 IMAGE:5515598), complete cds Length = 1503 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 109 agagatctgctgctgctgct 128
>ref|XM_959991.1| Neurospora crassa OR74A hypothetical protein (NCU02490.1) partial mRNA Length = 1437 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctgctgctgctgcttggct 296 |||||||||||||||||||| Sbjct: 343 tctgctgctgctgcttggct 324
>ref|XM_331688.1| Neurospora crassa OR74A hypothetical protein (NCU02490.1) partial mRNA Length = 1437 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tctgctgctgctgcttggct 296 |||||||||||||||||||| Sbjct: 343 tctgctgctgctgcttggct 324
>gb|AC141888.4| Mus musculus BAC clone RP23-462H3 from chromosome 19, complete sequence Length = 185192 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 15536 cttctcctccttcttcctcttctt 15559 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 15462 cttctcctccttcttcctcttctt 15485
>gb|AC124508.5| Mus musculus BAC clone RP23-433B5 from chromosome 7, complete sequence Length = 188011 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 58522 ttcctgcctcagcttctcca 58541
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 110473 tcctgcctcagctgctccatctcc 110450
>gb|AC100755.8| Homo sapiens chromosome 15, clone RP11-262J5, complete sequence Length = 174177 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 166200 tcttctcctcctcctgcctcttct 166177
>ref|XM_912353.2| PREDICTED: Mus musculus RIKEN cDNA 4921528I07 gene (4921528I07Rik), mRNA Length = 1359 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 gcctccgcctgttcctgcct 352 |||||||||||||||||||| Sbjct: 936 gcctccgcctgttcctgcct 955
>gb|AC132429.2| Mus musculus BAC clone RP23-203O20 from chromosome 1, complete sequence Length = 199083 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ttctcctccttctgcctctt 403 |||||||||||||||||||| Sbjct: 13823 ttctcctccttctgcctctt 13842
>gb|AC123533.4| Mus musculus BAC clone RP23-269E2 from chromosome 14, complete sequence Length = 187119 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 98653 ttcctgcctcagcttctcca 98634
>ref|XM_757159.1| Ustilago maydis 521 hypothetical protein (UM06105.1) partial mRNA Length = 1233 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 catctcctcttccatggccg 381 |||||||||||||||||||| Sbjct: 294 catctcctcttccatggccg 275
>ref|XM_532667.2| PREDICTED: Canis familiaris similar to CG8027-PA (LOC475443), mRNA Length = 4020 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggacccagctctgccagcca 472 |||||||||||||||||||| Sbjct: 369 ggacccagctctgccagcca 388
>gb|AC132251.3| Mus musculus BAC clone RP24-447I16 from chromosome 19, complete sequence Length = 187534 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 140255 cttctcctccttcttcctcttctt 140278 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 140181 cttctcctccttcttcctcttctt 140204
>gb|AC132083.3| Mus musculus BAC clone RP24-540G23 from chromosome 5, complete sequence Length = 158764 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||| |||||||| Sbjct: 101603 tcttctcctccttcttcctcttct 101626
>gb|AC122349.4| Mus musculus BAC clone RP23-383O11 from chromosome 10, complete sequence Length = 188688 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 281 ctgctgctgcttggctctcttccg 304 ||||||||||||||||||| |||| Sbjct: 133103 ctgctgctgcttggctctcctccg 133126
>gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosome 5, complete sequence Length = 188616 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ctgctgctgcttggctctct 300 |||||||||||||||||||| Sbjct: 160276 ctgctgctgcttggctctct 160257
>gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome 8, complete sequence Length = 206643 Score = 40.1 bits (20), Expect = 9.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 479 atccactgcgctcacacactgcatatactcct 510 |||||| ||| ||||||||||||| ||||||| Sbjct: 60112 atccacagcggtcacacactgcatgtactcct 60143
>ref|XM_537627.2| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 8, transcript variant 1 (LOC480507), mRNA Length = 3651 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 499 gcatatactccttggttgtcaggacaagctcatggtacac 538 |||| |||||||| || ||||| || |||||||||||||| Sbjct: 3475 gcatgtactccttcgtcgtcagcaccagctcatggtacac 3436
>ref|XM_852270.1| PREDICTED: Canis familiaris similar to DEAH (Asp-Glu-Ala-His) box polypeptide 8, transcript variant 3 (LOC480507), mRNA Length = 3492 Score = 40.1 bits (20), Expect = 9.5 Identities = 35/40 (87%) Strand = Plus / Minus Query: 499 gcatatactccttggttgtcaggacaagctcatggtacac 538 |||| |||||||| || ||||| || |||||||||||||| Sbjct: 3316 gcatgtactccttcgtcgtcagcaccagctcatggtacac 3277
>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence Length = 193861 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 agagagcactgctggggtgc 587 |||||||||||||||||||| Sbjct: 109864 agagagcactgctggggtgc 109883
>gb|AC123058.3| Mus musculus BAC clone RP23-188J8 from 19, complete sequence Length = 194636 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccat 364 |||||||||||||||||||| Sbjct: 108962 tcctgcctcagcttctccat 108943
>ref|NM_007349.3| Homo sapiens PAX interacting (with transcription-activation domain) protein 1 (PAXIP1), mRNA Length = 3723 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 1351 agagatctgctgctgctgct 1332
>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence Length = 236164 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 14308 ttcctgcctcagcttctcca 14327
>gb|AC164563.4| Mus musculus BAC clone RP23-130D15 from chromosome 6, complete sequence Length = 202948 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 15955 tcctgcctcagctgctccatctcc 15978
>gb|AC163440.3| Mus musculus chromosome 1, clone RP23-445K8, complete sequence Length = 194714 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 51728 cttctcctccttcttcctcttctt 51751 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 51668 cttctcctccttcttcctcttctt 51691
>emb|AL591686.10| Human DNA sequence from clone RP11-561I11 on chromosome 1 Contains the 3' end of a novel gene (FLJ40773) and two novel genes, complete sequence Length = 175463 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 atctgctgctgctgcttggc 295 |||||||||||||||||||| Sbjct: 19141 atctgctgctgctgcttggc 19160
>emb|AL445664.14| Human DNA sequence from clone RP11-343J18 on chromosome 9 Contains part of a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 161002 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 atggccgtcttctcctcctt 394 |||||||||||||||||||| Sbjct: 118597 atggccgtcttctcctcctt 118578
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 gctctgccagccattgcgga 479 |||||||||||||||||||| Sbjct: 2686361 gctctgccagccattgcgga 2686380
>ref|XM_500756.1| Yarrowia lipolytica CLIB122, YALI0B11352g predicted mRNA Length = 3336 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 490 tcacacactgcatatactccttgg 513 ||||||| |||||||||||||||| Sbjct: 3142 tcacacaatgcatatactccttgg 3119
>gb|BT010038.1| Drosophila melanogaster LD44321 full insert cDNA Length = 3782 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3338 tcttctcctccttctgcttcttct 3315
>emb|AL096711.9|HSJ403A15 Human DNA sequence from clone RP3-403A15 on chromosome 6q22.31-23.1 Contains the 3' end of a novel gene, the gene KIAA0408, a 60S Ribosomal protein L23 (RPL23) pseudogene and two CpG islands, complete sequence Length = 83709 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 81532 cagcttctccatctcctctt 81551
>gb|AC116166.6| Homo sapiens chromosome 15, clone RP11-475F15, complete sequence Length = 174164 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 133803 tcttctcctcctcctgcctcttct 133826
>gb|AC015933.9| Homo sapiens chromosome 18, clone CTD-2023G8, complete sequence Length = 249021 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctc 401 |||||||||||||||||||| Sbjct: 56667 tcttctcctccttctgcctc 56686
>emb|BX842631.1| Neurospora crassa DNA linkage group I BAC contig B1O14 Length = 119219 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tctgctgctgctgcttggct 296 |||||||||||||||||||| Sbjct: 34797 tctgctgctgctgcttggct 34816
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||| |||||||| Sbjct: 114221 tcttctcctccttctccctcttct 114198
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 135832 cttctcctccttcttcctcttctt 135855 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 135772 cttctcctccttcttcctcttctt 135795
>gb|AC138747.3| Homo sapiens chromosome 15, clone RP11-147B8, complete sequence Length = 158416 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 16992 tcttctcctcctcctgcctcttct 17015
>emb|AL645639.17| Mouse DNA sequence from clone RP23-370G8 on chromosome 11 Contains a novel gene (LOC327917), the 5' end of the Adamts2 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 2, two novel genes (4930579K21) and a CpG island, complete sequence Length = 188520 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 ctccatctcctcttccatggccgtcttc 386 ||||||||||||||| ||| |||||||| Sbjct: 119405 ctccatctcctcttctatgtccgtcttc 119432
>gb|AC100756.4| Homo sapiens chromosome 18, clone RP11-529J17, complete sequence Length = 173833 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 165856 tcttctcctcctcctgcctcttct 165833
>emb|BX640616.1|HSM806644 Homo sapiens mRNA; cDNA DKFZp686E06126 (from clone DKFZp686E06126) Length = 5531 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 3249 agagatctgctgctgctgct 3230
>emb|CR293525.10| Zebrafish DNA sequence from clone CH211-142B9 in linkage group 12, complete sequence Length = 155553 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 acaagctcatggtacaccac 541 |||||||||||||||||||| Sbjct: 81059 acaagctcatggtacaccac 81078
>emb|AL590503.11| Mouse DNA sequence from clone RP23-128M23 on chromosome 13, complete sequence Length = 169547 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 560 gagaccatagagagcactgc 579 |||||||||||||||||||| Sbjct: 165907 gagaccatagagagcactgc 165888
>emb|BX537351.16| Zebrafish DNA sequence from clone DKEYP-84B10 in linkage group 17, complete sequence Length = 161005 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ttctccatctcctcttccat 376 |||||||||||||||||||| Sbjct: 144635 ttctccatctcctcttccat 144654
>emb|BX323069.12| Zebrafish DNA sequence from clone DKEYP-69D2 in linkage group 25, complete sequence Length = 54390 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tccgcctgttcctgcctcag 355 |||||||||||||||||||| Sbjct: 39830 tccgcctgttcctgcctcag 39811
>emb|BX601648.7| Zebrafish DNA sequence from clone DKEY-14F19 in linkage group 11, complete sequence Length = 230487 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ttctcctccttctgcctctt 403 |||||||||||||||||||| Sbjct: 165244 ttctcctccttctgcctctt 165263 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ttctcctccttctgcctctt 403 |||||||||||||||||||| Sbjct: 159834 ttctcctccttctgcctctt 159853 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ttctcctccttctgcctctt 403 |||||||||||||||||||| Sbjct: 154965 ttctcctccttctgcctctt 154984 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ttctcctccttctgcctctt 403 |||||||||||||||||||| Sbjct: 144441 ttctcctccttctgcctctt 144460
>gb|BC018239.1| Mus musculus guanine nucleotide binding protein, beta 3, mRNA (cDNA clone MGC:25269 IMAGE:4511683), complete cds Length = 1887 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 415 tcctgcctcagctgctccatctcc 392
>gb|AC091304.15| Homo sapiens chromosome 15, clone RP11-483E23, complete sequence Length = 179218 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 70855 tcttctcctcctcctgcctcttct 70878
>gb|AC109633.5| Homo sapiens chromosome 8, clone CTD-2024D23, complete sequence Length = 134242 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gtgtctttcacagagaagaa 448 |||||||||||||||||||| Sbjct: 92858 gtgtctttcacagagaagaa 92839
>gb|AY128430.1| Drosophila melanogaster GH26816 full insert cDNA Length = 3199 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctgctgctgcttggctct 298 |||||||||||||||||||| Sbjct: 3037 tgctgctgctgcttggctct 3018
>gb|AC025138.14| Homo sapiens chromosome 15, clone RP11-291O21, complete sequence Length = 173173 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 143928 tcttctcctcctcctgcctcttct 143951
>dbj|AK097517.1| Homo sapiens cDNA FLJ40198 fis, clone TESTI2019975, weakly similar to TRICHOHYALIN Length = 2479 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1286 tcttctcctcctcctgcctcttct 1263
>gb|AC091559.7| Homo sapiens chromosome 8, clone RP11-60C8, complete sequence Length = 166357 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gtgtctttcacagagaagaa 448 |||||||||||||||||||| Sbjct: 91729 gtgtctttcacagagaagaa 91710
>gb|AC010067.7| Drosophila melanogaster 3L BAC RP98-10I10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179856 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 76429 tcttctcctccttctgcttcttct 76406
>dbj|AK123600.1| Homo sapiens cDNA FLJ41606 fis, clone CTONG3001123, highly similar to Mus musculus Pax transcription activation domain interacting protein PTIP mRNA Length = 3850 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 1490 agagatctgctgctgctgct 1471
>dbj|AK123044.1| Homo sapiens cDNA FLJ41049 fis, clone PROST2008993, moderately similar to Mus musculus Pax transcription activation domain interacting protein PTIP mRNA Length = 2477 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 1396 agagatctgctgctgctgct 1377
>dbj|AK093584.1| Homo sapiens cDNA FLJ36265 fis, clone THYMU2002841, highly similar to Mus musculus Pax transcription activation domain interacting protein PTIP mRNA Length = 2404 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 45 agagatctgctgctgctgct 26
>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence Length = 177355 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 122911 tcttctcctcctcctgcctcttct 122888
>gb|AC104998.4| Homo sapiens chromosome 8, clone CTC-830C11, complete sequence Length = 129469 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 429 gtgtctttcacagagaagaa 448 |||||||||||||||||||| Sbjct: 103036 gtgtctttcacagagaagaa 103055
>gb|AC110015.5| Homo sapiens chromosome 18, clone RP11-104H13, complete sequence Length = 168389 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctc 401 |||||||||||||||||||| Sbjct: 116220 tcttctcctccttctgcctc 116239
>dbj|AK096490.1| Homo sapiens cDNA FLJ39171 fis, clone OCBBF2003052 Length = 2777 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 387 cagcttctccatctcctctt 368
>ref|NM_206268.1| Drosophila melanogaster CG32264-RC, transcript variant C (CG32264), mRNA Length = 2845 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 2406 tcttctcctccttctgcttcttct 2383
>gb|AC092016.2| Homo sapiens chromosome 1 clone RP11-384I6, complete sequence Length = 86085 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 atctgctgctgctgcttggc 295 |||||||||||||||||||| Sbjct: 78443 atctgctgctgctgcttggc 78462
>ref|NM_168039.1| Drosophila melanogaster CG32264-RB, transcript variant B (CG32264), mRNA Length = 4309 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3863 tcttctcctccttctgcttcttct 3840
>ref|NM_168038.1| Drosophila melanogaster CG32264-RD, transcript variant D (CG32264), mRNA Length = 3801 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3362 tcttctcctccttctgcttcttct 3339
>ref|NM_168037.1| Drosophila melanogaster CG32264-RA, transcript variant A (CG32264), mRNA Length = 3810 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3371 tcttctcctccttctgcttcttct 3348
>dbj|AB042402.1| Mus musculus GNB3 gene for GTP-binding protein beta3 subunit, complete cds Length = 11935 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 5646 tcctgcctcagctgctccatctcc 5623
>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence Length = 171987 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 107171 tcttctcctcctcctgcctcttct 107148
>gb|AC015890.9| Mus musculus chromosome 10, clone RP21-244O21, complete sequence Length = 160840 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 147266 ttcctgcctcagcttctcca 147285
>ref|XM_929339.1| PREDICTED: Homo sapiens FLJ40198 protein (LOC283767), mRNA Length = 3687 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1298 tcttctcctcctcctgcctcttct 1275
>gb|AY070840.1| Drosophila melanogaster GH21062 full length cDNA Length = 4308 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3863 tcttctcctccttctgcttcttct 3840
>ref|XM_928237.1| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC645202), mRNA Length = 3573 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1181 tcttctcctcctcctgcctcttct 1158
>ref|XM_498421.2| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC645162), mRNA Length = 2214 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1342 tcttctcctcctcctgcctcttct 1319
>ref|XM_496044.2| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC440247), mRNA Length = 3573 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1181 tcttctcctcctcctgcctcttct 1158
>ref|XM_208835.6| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC440320), mRNA Length = 3590 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1198 tcttctcctcctcctgcctcttct 1175
>ref|XM_496041.2| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC440243), mRNA Length = 3618 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1226 tcttctcctcctcctgcctcttct 1203
>ref|XM_496037.2| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC440233), mRNA Length = 2428 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1238 tcttctcctcctcctgcctcttct 1215
>ref|XM_929108.1| PREDICTED: Homo sapiens similar to cis-Golgi matrix protein GM130 (LOC646145), mRNA Length = 3859 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 1468 tcttctcctcctcctgcctcttct 1445
>gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map 15q21.3, complete sequence Length = 157533 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 131394 cttctcctccttcttcctcttctt 131417
>ref|XM_680768.1| PREDICTED: Danio rerio similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8), transcript variant 1 (LOC560163), mRNA Length = 3637 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 acaagctcatggtacaccac 541 |||||||||||||||||||| Sbjct: 3438 acaagctcatggtacaccac 3419
>ref|XM_681116.1| PREDICTED: Danio rerio similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8), transcript variant 1 (LOC564059), mRNA Length = 3637 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 522 acaagctcatggtacaccac 541 |||||||||||||||||||| Sbjct: 3438 acaagctcatggtacaccac 3419
>gb|AC099010.1| Drosophila melanogaster, chromosome 2L, region 27B-27C, BAC clone BACR20B21, complete sequence Length = 166512 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tgctgctgctgcttggctct 298 |||||||||||||||||||| Sbjct: 46155 tgctgctgctgcttggctct 46174
>gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 15q21.3, complete sequence Length = 150294 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 103073 cttctcctccttcttcctcttctt 103096
>gb|AC120137.16| Mus musculus chromosome 5, clone RP23-280O16, complete sequence Length = 181464 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tgctgctgcttggctctctt 301 |||||||||||||||||||| Sbjct: 164129 tgctgctgcttggctctctt 164110
>gb|AC093726.3| Homo sapiens BAC clone RP11-5C23 from 7, complete sequence Length = 159041 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 43243 agagatctgctgctgctgct 43262
>gb|AC138749.5| Homo sapiens chromosome 15, clone RP11-536P16, complete sequence Length = 162388 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 125429 tcttctcctcctcctgcctcttct 125406
>gb|AC135348.5| Homo sapiens chromosome 17, clone RP13-822L18, complete sequence Length = 111302 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 105168 tcttctcctcctcctgcctcttct 105191
>ref|NM_070026.2| Caenorhabditis elegans C27D8.2 (C27D8.2) mRNA, complete cds Length = 1557 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 ttctcctccttctgcctcttcttg 407 ||||||||||||||| |||||||| Sbjct: 1142 ttctcctccttctgcttcttcttg 1119
>dbj|AK030354.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330400P12 product:guanine nucleotide binding protein, beta 3, full insert sequence Length = 1781 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 98 tcctgcctcagctgctccatctcc 75
>dbj|AK014789.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833431H09 product:GUANINE NUCLEOTIDE-BINDING PROTEIN G(I)/G(S)/G(T) BETA SUBUNIT 3 (TRANSDUCIN BETA CHAIN 3), full insert sequence Length = 1560 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 134 tcctgcctcagctgctccatctcc 111
>gb|AC025913.11| Mus musculus 10 BAC RP23-287L13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228124 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 168071 ttcctgcctcagcttctcca 168090
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone BACR13J07, complete sequence Length = 174287 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctgctgctgcttggctct 298 |||||||||||||||||||| Sbjct: 33531 tgctgctgctgcttggctct 33512
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 28178615 agagatctgctgctgctgct 28178596
>gb|AC016772.9| Homo sapiens BAC clone RP11-567N19 from 2, complete sequence Length = 176932 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 cacactgcatatactccttg 512 |||||||||||||||||||| Sbjct: 67604 cacactgcatatactccttg 67585
>dbj|AP000054.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 25/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gagaagaacataggacccag 460 |||||||||||||||||||| Sbjct: 37800 gagaagaacataggacccag 37781
>gb|BC033781.1| Homo sapiens PAX interacting (with transcription-activation domain) protein 1, mRNA (cDNA clone MGC:45592 IMAGE:4509264), complete cds Length = 2969 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 592 agagatctgctgctgctgct 573
>ref|XM_236873.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 4930555G01 (LOC301193), mRNA Length = 1101 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctgctgctgcttggctct 298 |||||||||||||||||||| Sbjct: 608 tgctgctgctgcttggctct 589
>gb|BT003479.1| Drosophila melanogaster RE59328 full insert cDNA Length = 3810 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3371 tcttctcctccttctgcttcttct 3348
>gb|AC068665.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-426K16, complete sequence Length = 205937 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 100229 cttctcctccttctccctcttctt 100252
>ref|XM_224588.3| PREDICTED: Rattus norvegicus Rho guanine nucleotide exchange factor (GEF) 3 (predicted) (Arhgef3_predicted), mRNA Length = 4296 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 cttcttgtggtccagcaggg 420 |||||||||||||||||||| Sbjct: 3405 cttcttgtggtccagcaggg 3386
>gb|AC073621.20| Homo sapiens chromosome 17, clone CTD-3073J20, complete sequence Length = 141048 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 80211 ttcctgcctcagcttctcca 80230
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 112 tccttcaggcgtgactggatcacc 135 |||||||| ||||||||||||||| Sbjct: 688538 tccttcagccgtgactggatcacc 688515
>gb|AC116165.7| Homo sapiens chromosome 15, clone RP11-467N20, complete sequence Length = 181697 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 96635 tcttctcctcctcctgcctcttct 96612
>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 71055 tcttctcctcctcctgcctcttct 71078
>gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6, complete sequence Length = 191557 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 80014 ttcctgcctcagcttctcca 80033
>gb|AC121562.8| Homo sapiens chromosome 15, clone CTD-2024P22, complete sequence Length = 118499 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 74673 tcttctcctcctcctgcctcttct 74650
>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence Length = 194754 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 40616 tcttctcctcctcctgcctcttct 40639
>gb|AC087273.5| Homo sapiens chromosome 8, clone RP11-156K13, complete sequence Length = 160835 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccat 364 |||||||||||||||||||| Sbjct: 122289 tcctgcctcagcttctccat 122270
>gb|AC027117.6| Homo sapiens chromosome 8, clone RP11-806O11, complete sequence Length = 160223 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccat 364 |||||||||||||||||||| Sbjct: 27611 tcctgcctcagcttctccat 27592
>emb|AL833789.20| Zebrafish DNA sequence from clone DKEY-69O7 in linkage group 12, complete sequence Length = 175664 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 acaagctcatggtacaccac 541 |||||||||||||||||||| Sbjct: 90690 acaagctcatggtacaccac 90709
>gb|AC012302.5|AC012302 Mus musculus chromosome 10, clone RP21-247L16, complete sequence Length = 130427 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 29310 ttcctgcctcagcttctcca 29329
>emb|AL670778.15| Mouse DNA sequence from clone RP23-234A24 on chromosome X, complete sequence Length = 201720 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tacaaacccatcttcttggg 235 |||||||||||||||||||| Sbjct: 195336 tacaaacccatcttcttggg 195317
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 62088 agagatctgctgctgctgct 62069
>emb|AJ332941.1|HSA332941 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KM10R Length = 717 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 261 cagcttctccatctcctctt 242
>dbj|AK105950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C12, full insert sequence Length = 1635 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 10 agagatctgctgctgctgct 29
>emb|AJ325142.1|HSA325142 Homo sapiens genomic sequence surrounding NotI site, clone NL1-FH7R Length = 746 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 262 cagcttctccatctcctctt 243
>gb|AC154557.2| Mus musculus BAC clone RP23-425M9 from 17, complete sequence Length = 186378 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tctcctccttctgcctcttc 404 |||||||||||||||||||| Sbjct: 61857 tctcctccttctgcctcttc 61876
>emb|AJ323288.1|HSA323288 Homo sapiens genomic sequence surrounding NotI site, clone NB1-345R Length = 900 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 261 cagcttctccatctcctctt 242
>gb|AC006371.2|AC006371 Homo sapiens BAC clone RP11-304C24 from Y, complete sequence Length = 202354 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 383 cttctcctccttctgcctcttctt 406 |||||||||||||| ||||||||| Sbjct: 175650 cttctcctccttcttcctcttctt 175673
>emb|AL773596.12| Zebrafish DNA sequence from clone CH211-208G24 in linkage group 17, complete sequence Length = 206778 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 cttctccatctcctcttcca 375 |||||||||||||||||||| Sbjct: 136934 cttctccatctcctcttcca 136915
>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20, complete sequence Length = 239874 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcagcttctccatctcctct 371 |||||||||||||||||||| Sbjct: 947 tcagcttctccatctcctct 928
>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20, complete sequence Length = 189717 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 tcagcttctccatctcctct 371 |||||||||||||||||||| Sbjct: 32961 tcagcttctccatctcctct 32942
>gb|AE003615.3| Drosophila melanogaster chromosome 2L, section 24 of 83 of the complete sequence Length = 270751 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 tgctgctgctgcttggctct 298 |||||||||||||||||||| Sbjct: 170025 tgctgctgctgcttggctct 170006
>gb|AE003479.3| Drosophila melanogaster chromosome 3L, section 13 of 83 of the complete sequence Length = 309958 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 32451 tcttctcctccttctgcttcttct 32474
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105 Length = 340000 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gagaagaacataggacccag 460 |||||||||||||||||||| Sbjct: 120009 gagaagaacataggacccag 119990
>dbj|AP006249.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-383B10, complete sequence Length = 195290 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 tcctgcctcagcttctccat 364 |||||||||||||||||||| Sbjct: 179054 tcctgcctcagcttctccat 179073
>emb|Z80214.1|CEC27D8 Caenorhabditis elegans Cosmid C27D8, complete sequence Length = 18946 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 ttctcctccttctgcctcttcttg 407 ||||||||||||||| |||||||| Sbjct: 13976 ttctcctccttctgcttcttcttg 13953
>gb|BT001507.1| Drosophila melanogaster LD38891 full insert cDNA Length = 3782 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 ||||||||||||||||| |||||| Sbjct: 3335 tcttctcctccttctgcttcttct 3312
>emb|BX538201.1|HSM806430 Homo sapiens mRNA; cDNA DKFZp686O11215 (from clone DKFZp686O11215) Length = 2506 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 agagatctgctgctgctgct 291 |||||||||||||||||||| Sbjct: 127 agagatctgctgctgctgct 108
>emb|AL935176.9| Mouse DNA sequence from clone RP23-38O10 on chromosome 2, complete sequence Length = 147619 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 gctgctgctgcttggctctc 299 |||||||||||||||||||| Sbjct: 75826 gctgctgctgcttggctctc 75807
>gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research Genetics mouse BAC library) complete sequence Length = 227538 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 57171 tcctgcctcagctgctccatctcc 57148
>gb|AC004277.1|AC004277 Drosophila melanogaster DNA sequence (P1 DS01321 (D143)), complete sequence Length = 82849 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tgctgctgctgcttggctct 298 |||||||||||||||||||| Sbjct: 4231 tgctgctgctgcttggctct 4250
>emb|CT030155.10| Mouse DNA sequence from clone RP23-425N11 on chromosome 17, complete sequence Length = 189713 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tctcctccttctgcctcttc 404 |||||||||||||||||||| Sbjct: 95746 tctcctccttctgcctcttc 95765
>gb|AC142254.4| Mus musculus BAC clone RP24-545G7 from 6, complete sequence Length = 159818 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 345 tcctgcctcagcttctccatctcc 368 ||||||||||||| |||||||||| Sbjct: 94352 tcctgcctcagctgctccatctcc 94329
>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence Length = 205726 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ctgctgctgcttggctctct 300 |||||||||||||||||||| Sbjct: 182122 ctgctgctgcttggctctct 182141
>gb|AC004031.1|AC004031 Homo sapiens 12q24 PAC RPCI1-261P5 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 74507 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 ttcctgcctcagcttctcca 363 |||||||||||||||||||| Sbjct: 12017 ttcctgcctcagcttctcca 11998
>gb|U72707.1|MNU72707 Makaira nigricans ryanodine receptor type 1 isoform mRNA, partial cds Length = 1185 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 349 gcctcagcttctccatctcctcttccat 376 ||||| ||||||||||||||| |||||| Sbjct: 757 gcctctgcttctccatctccttttccat 730
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 tcacacactgcatatactccttgg 513 ||||||| |||||||||||||||| Sbjct: 1526702 tcacacaatgcatatactccttgg 1526725
>gb|AC079445.28| Mus musculus strain C57BL/6J chromosome 5 clone rp23-403l21, complete sequence Length = 189517 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tgctgctgcttggctctctt 301 |||||||||||||||||||| Sbjct: 62339 tgctgctgcttggctctctt 62320
>ref|NM_001012279.1| Homo sapiens chromosome 6 open reading frame 174 (C6orf174), mRNA Length = 3556 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 cagcttctccatctcctctt 372 |||||||||||||||||||| Sbjct: 1165 cagcttctccatctcctctt 1146
>emb|AL663053.12| Mouse DNA sequence from clone RP23-436M12 on chromosome 11, complete sequence Length = 203593 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ctgttcctgcctcagcttct 360 |||||||||||||||||||| Sbjct: 70698 ctgttcctgcctcagcttct 70679
>gb|M17919.1|HUMIR3EBA Human DNA with homology to EBV IR3 repeat, clone Hu3 Length = 988 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 382 tcttctcctccttctgcctcttct 405 |||||||||||| ||||||||||| Sbjct: 384 tcttctcctcctcctgcctcttct 361
>dbj|AP000326.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:PQ125H6, complete sequence Length = 83762 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gagaagaacataggacccag 460 |||||||||||||||||||| Sbjct: 20051 gagaagaacataggacccag 20032 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,911,012 Number of Sequences: 3902068 Number of extensions: 7911012 Number of successful extensions: 364149 Number of sequences better than 10.0: 252 Number of HSP's better than 10.0 without gapping: 253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 362371 Number of HSP's gapped (non-prelim): 1761 length of query: 692 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 669 effective length of database: 17,143,297,704 effective search space: 11468866163976 effective search space used: 11468866163976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
