>UCHL5_MOUSE (Q9WUP7) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC|
           3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5)
           (Ubiquitin C-terminal hydrolase UCH37)
          Length = 329

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
 Frame = -1

Query: 424 GGIGEMGWLKMVQPVIQERIDKFSQNEIRFSVMAISKNRKEIF---IMELKXLQXKRENL 254
           G   +  W+  V+PVI++RI K+S+ EIRF++MAI  +RK I+   I EL+    + E +
Sbjct: 189 GACNQDDWITAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPM 248

Query: 253 LSQMGDPSANRQRPSVERSLAEVAAQIEAVTXXXXXXXXXXXXXKTENIRRKHNYVPFXF 74
            +  G    +  +  V R+   +  +++ +                ENIRRKHNY+PF  
Sbjct: 249 DTDQGSTVLSAIQSEVARNQMLIEEEVQKLKRYKI-----------ENIRRKHNYLPFIM 297

Query: 73  NFLKILEEKQQLKPLIEKAKQNSH 2
             LK L E QQL PL+EKAK+  +
Sbjct: 298 ELLKTLAEHQQLIPLVEKAKEKQN 321

>UCHL5_BOVIN (Q9XSJ0) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC|
           3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5)
           (Ubiquitin C-terminal hydrolase UCH37)
          Length = 328

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 51/141 (36%), Positives = 75/141 (53%)
 Frame = -1

Query: 424 GGIGEMGWLKMVQPVIQERIDKFSQNEIRFSVMAISKNRKEIFIMELKXLQXKRENLLSQ 245
           G   +  W+  V+PVI++RI K+S+ EIRF++MAI  +RK I+  E K  + +R+     
Sbjct: 189 GACNQDDWISAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIY--EQKIAELQRQLAEEP 246

Query: 244 MGDPSANRQRPSVERSLAEVAAQIEAVTXXXXXXXXXXXXXKTENIRRKHNYVPFXFNFL 65
           M     +    +++  +A+    IE                  ENIRRKHNY+PF    L
Sbjct: 247 MDTDQGSNMLSAIQSEVAKNQMLIEEEVQKLKRYKI-------ENIRRKHNYLPFIMELL 299

Query: 64  KILEEKQQLKPLIEKAKQNSH 2
           K L E QQL PL+EKAK+  +
Sbjct: 300 KTLAEHQQLIPLVEKAKEKQN 320

>UCHL5_HUMAN (Q9Y5K5) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC|
           3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5)
           (Ubiquitin C-terminal hydrolase UCH37)
          Length = 329

 Score = 86.7 bits (213), Expect = 2e-17
 Identities = 50/144 (34%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
 Frame = -1

Query: 424 GGIGEMGWLKMVQPVIQERIDKFSQNEIRFSVMAISKNRKEIF---IMELKXLQXKRENL 254
           G   +  W   V+PVI++RI K+S+ EIRF++MAI  +RK I+   I EL+    + E +
Sbjct: 189 GACNQDDWFSAVRPVIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPM 248

Query: 253 LSQMGDPSANRQRPSVERSLAEVAAQIEAVTXXXXXXXXXXXXXKTENIRRKHNYVPFXF 74
            +  G+   +  +  V ++   +  +++ +                ENIRRKHNY+PF  
Sbjct: 249 DTDQGNSMLSAIQSEVAKNQMLIEEEVQKLKRYKI-----------ENIRRKHNYLPFIM 297

Query: 73  NFLKILEEKQQLKPLIEKAKQNSH 2
             LK L E QQL PL+EKAK+  +
Sbjct: 298 ELLKTLAEHQQLIPLVEKAKEKQN 321

>UBH4_CAEEL (Q09444) Probable ubiquitin carboxyl-terminal hydrolase ubh-4 (EC|
           3.4.19.12) (Ubiquitin C-terminal hydrolase family 1
           member 4) (Ubiquitin thioesterase 4)
          Length = 321

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 41/134 (30%), Positives = 70/134 (52%)
 Frame = -1

Query: 412 EMGWLKMVQPVIQERIDKFSQNEIRFSVMAISKNRKEIFIMELKXLQXKRENLLSQMGDP 233
           E  W++ ++PVIQ+R+ K+S+ EI F++MA+  NRK+        LQ   ENL+    + 
Sbjct: 188 EQDWIEAIKPVIQQRMQKYSEGEITFNLMALVPNRKQ-------KLQEMMENLIQANENN 240

Query: 232 SANRQRPSVERSLAEVAAQIEAVTXXXXXXXXXXXXXKTENIRRKHNYVPFXFNFLKILE 53
               Q   + +++A+   ++E                + EN RR+HNY PF    +KIL 
Sbjct: 241 ELEEQIADLNKAIADEDYKME--------------MYRKENNRRRHNYTPFVIELMKILA 286

Query: 52  EKQQLKPLIEKAKQ 11
           ++ +L  L++ A Q
Sbjct: 287 KEGKLVGLVDNAYQ 300

>UBLH2_SCHPO (Q9UUB6) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)|
          Length = 300

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 16/60 (26%)
 Frame = -1

Query: 382 VIQERIDKFSQNEIRFSVMAISKNRK----------------EIFIMELKXLQXKRENLL 251
           VIQ RI  +   EIRF++M I K++K                 I + + K L+ KREN L
Sbjct: 198 VIQARIANYDPAEIRFNLMVICKDKKASLLTREDLTDEEKAASIAVEDEKRLRWKRENQL 257

>CADH1_RAT (Q9R0T4) Epithelial-cadherin precursor (E-cadherin) (Uvomorulin)|
           (Cadherin-1) (CD324 antigen) [Contains: E-Cad/CTF1;
           E-Cad/CTF2; E-Cad/CTF3]
          Length = 886

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 412 EMGWLKMVQPVIQERIDKF 356
           E GWLK+ QP+ +E IDK+
Sbjct: 214 ETGWLKVTQPLDREAIDKY 232

>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 22/76 (28%), Positives = 30/76 (39%)
 Frame = -1

Query: 247  QMGDPSANRQRPSVERSLAEVAAQIEAVTXXXXXXXXXXXXXKTENIRRKHNYVPFXFNF 68
            Q+ +  A RQR   ER LAE  A I   T             + EN R +       F  
Sbjct: 1955 QLAEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIALKEKEAENERLRRLAEDEAFQR 2014

Query: 67   LKILEEKQQLKPLIEK 20
             ++ E+  Q K  IE+
Sbjct: 2015 RRLEEQAAQHKADIEE 2030


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,881,394
Number of Sequences: 219361
Number of extensions: 653107
Number of successful extensions: 2084
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)