| Clone Name | rbasd16c16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full insert sequence Length = 1198 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 1074 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1015 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 1014 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 955 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 954 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 895 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 355 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| | Sbjct: 894 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 835 Query: 356 ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgccgtta 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 834 ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatgccattg 775 Query: 416 accttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactgaca 475 ||||| || || ||||| || | |||||| ||||||| |||||| |||||||||||||| Sbjct: 774 accttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactgacg 715 Query: 476 ctcctcatggtatgatgcccaac 498 ||||| ||||||||||||||||| Sbjct: 714 ctcctaatggtatgatgcccaac 692
>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full insert sequence Length = 1187 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 1063 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1004 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 1003 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 944 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 943 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 884 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 355 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| | Sbjct: 883 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 824 Query: 356 ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgccgtta 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 823 ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatgccattg 764 Query: 416 accttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactgaca 475 ||||| || || ||||| || | |||||| ||||||| |||||| |||||||||||||| Sbjct: 763 accttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactgacg 704 Query: 476 ctcctcatggtatgatgcccaac 498 ||||| ||||||||||||||||| Sbjct: 703 ctcctaatggtatgatgcccaac 681
>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full insert sequence Length = 1187 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 1063 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1004 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 1003 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 944 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 943 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 884 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 355 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| | Sbjct: 883 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 824 Query: 356 ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgccgtta 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 823 ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatgccattg 764 Query: 416 accttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactgaca 475 ||||| || || ||||| || | |||||| ||||||| |||||| |||||||||||||| Sbjct: 763 accttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactgacg 704 Query: 476 ctcctcatggtatgatgcccaac 498 ||||| ||||||||||||||||| Sbjct: 703 ctcctaatggtatgatgcccaac 681
>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full insert sequence Length = 1399 Score = 402 bits (203), Expect = e-109 Identities = 338/383 (88%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 1088 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 1029 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 1028 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 969 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 968 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 909 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgttt 355 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| | Sbjct: 908 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgtct 849 Query: 356 ctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgccgtta 415 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 848 ctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatgccattg 789 Query: 416 accttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactgaca 475 ||||| || || ||||| || | |||||| ||||||| |||||| |||||||||||||| Sbjct: 788 accttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactgacg 729 Query: 476 ctcctcatggtatgatgcccaac 498 ||||| ||||||||||||||||| Sbjct: 728 ctcctaatggtatgatgcccaac 706
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 7294468 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 7294409 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 7294408 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 7294349 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 7294348 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 7294289 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 353 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 7294288 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 7294231 Score = 107 bits (54), Expect = 3e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatg 409 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 7294117 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatg 7294058 Query: 410 cc 411 || Sbjct: 7294057 cc 7294056 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 414 taaccttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactga 473 ||||||| || || ||||| || | |||||| ||||||| |||||| ||||||||||||| Sbjct: 7293970 taaccttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactga 7293911 Query: 474 cactcctcatggtatgatgcccaac 498 | ||||| ||||||||||||||||| Sbjct: 7293910 cgctcctaatggtatgatgcccaac 7293886
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 45724 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 45665 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 45664 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 45605 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 45604 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 45545 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 353 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 45544 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 45487 Score = 107 bits (54), Expect = 3e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatg 409 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 45373 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatg 45314 Query: 410 cc 411 || Sbjct: 45313 cc 45312 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 414 taaccttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactga 473 ||||||| || || ||||| || | |||||| ||||||| |||||| ||||||||||||| Sbjct: 45226 taaccttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactga 45167 Query: 474 cactcctcatggtatgatgcccaac 498 | ||||| ||||||||||||||||| Sbjct: 45166 cgctcctaatggtatgatgcccaac 45142
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Minus Query: 116 cctcattctgcagtgacataaatggagggctggaagtggtttgttttgcgcgaggtccac 175 |||||| || |||||| ||| |||||||||||| || ||||| ||||| | | ||||| Sbjct: 7292363 cctcatgcttcagtgatataggtggagggctggaggtagtttgctttgctcttgctccac 7292304 Query: 176 tcatacaagactttaccagaaacatcataaaagatgaagtcagcttggtccttgtttagc 235 | ||||||| || ||||||||||||||||| ||||||||||||||||||| ||||| | Sbjct: 7292303 ttgtacaagatgttcccagaaacatcataaaatatgaagtcagcttggtcctggtttatc 7292244 Query: 236 tggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctgg 295 |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct: 7292243 tggagggacatgaacccttgtccatcgtaaaagaactggagcttatcagaatttggctgc 7292184 Query: 296 tagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggactgt 353 ||||||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| Sbjct: 7292183 aagactcctctccatgcttttgaaccacctccacttgtgaagtattggataggactgt 7292126 Score = 107 bits (54), Expect = 3e-20 Identities = 60/62 (96%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatg 409 |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 7292012 ctgtctctgctgctaatgtgttccaggcagtggtcgtgcccattgatgtagaagtcgatg 7291953 Query: 410 cc 411 || Sbjct: 7291952 cc 7291951 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 414 taaccttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactga 473 ||||||| || || ||||| || | |||||| ||||||| |||||| ||||||||||||| Sbjct: 7291865 taaccttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactga 7291806 Query: 474 cactcctcatggtatgatgcccaac 498 | ||||| ||||||||||||||||| Sbjct: 7291805 cgctcctaatggtatgatgcccaac 7291781
>gb|AY108108.1| Zea mays PCO072542 mRNA sequence Length = 1591 Score = 232 bits (117), Expect = 9e-58 Identities = 252/297 (84%) Strand = Plus / Minus Query: 203 taaaagatgaagtcagcttggtccttgtttagctggagggacatgaacccttgcccatca 262 |||||||| |||| ||| ||||| | ||| |||||||||||||||||||||||||| || Sbjct: 1214 taaaagataaagtgagcctggtcttggttcagctggagggacatgaacccttgcccgtcg 1155 Query: 263 taaaagaactggagcttatcatcatttggctggtagactcccctccatgcttttgaaccg 322 || ||||| ||||||| || | ||||| ||| ||||||| |||||||| || |||||| Sbjct: 1154 tagaagaatcggagcttgtccttgtttggatggaagactcctctccatgccttggaaccg 1095 Query: 323 cctccactagtgaagtattggattggactgtttctgctgctaatgtgttccaggcagtgg 382 ||||| || ||||| || |||| |||||||| ||||||||||||||| ||||| ||||| Sbjct: 1094 cctccgctcgtgaaatactggagtggactgtctctgctgctaatgtgctccagacagtga 1035 Query: 383 tcatgcccattgatgtagaagtcgatgccgttaaccttgaggaccggaagaagcaattgc 442 || || ||||||||||||||||||| ||| || |||||||||| ||||| || |||| | Sbjct: 1034 tcgtgtccattgatgtagaagtcgacgccattgtccttgaggactggaagtagtaattcc 975 Query: 443 aggagctcctcggtgtccccatggtcactgacactcctcatggtatgatgcccaacc 499 || |||||||||||||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 974 agaagctcctcggtgtccctgtgctcactcacactcctcatggtgtgatgcccaacc 918
>dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043K11, full insert sequence Length = 2343 Score = 222 bits (112), Expect = 8e-55 Identities = 190/216 (87%) Strand = Plus / Plus Query: 138 tggagggctggaagtggtttgttttgcgcgaggtccactcatacaagactttaccagaaa 197 |||||||||||| || ||||| ||||| | | |||||| ||||||| || ||||||| Sbjct: 1633 tggagggctggaggtagtttgctttgctcttgctccacttgtacaagatgttcccagaaa 1692 Query: 198 catcataaaagatgaagtcagcttggtccttgtttagctggagggacatgaacccttgcc 257 ||||| |||| ||||||||||||||||||| ||||| ||||||||||||||||||||| | Sbjct: 1693 catcacaaaatatgaagtcagcttggtcctggtttatctggagggacatgaacccttgtc 1752 Query: 258 catcataaaagaactggagcttatcatcatttggctggtagactcccctccatgcttttg 317 |||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1753 catcgtaaaagaactggagcttatcagaatttggctgcaagactcctctccatgcttttg 1812 Query: 318 aaccgcctccactagtgaagtattggattggactgt 353 |||| |||||||| |||||||||||||| ||||||| Sbjct: 1813 aaccacctccacttgtgaagtattggataggactgt 1848 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 414 taaccttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactga 473 ||||||| || || ||||| || | |||||| ||||||| |||||| ||||||||||||| Sbjct: 1994 taaccttcagaactggaagtagaagttgcagaagctccttggtgtcaccatggtcactga 2053 Query: 474 cactcctcatggtatgatgcccaac 498 | ||||| ||||||||||||||||| Sbjct: 2054 cgctcctaatggtatgatgcccaac 2078 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 373 caggcagtggtcatgcccattgatgtagaagtcgatgcc 411 |||||||||||| |||||||||||||||||||||||||| Sbjct: 1870 caggcagtggtcgtgcccattgatgtagaagtcgatgcc 1908
>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid phosphatase (OSJNBa0023I19.10), mRNA Length = 1008 Score = 204 bits (103), Expect = 2e-49 Identities = 214/251 (85%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 301 |||| ||||||||| |||||||| |||||||||||||| || || ||| | || | | Sbjct: 878 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 819 Query: 302 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctg 361 || |||||||| ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 818 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactgtttctgctg 759 Query: 362 ctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgccgttaaccttg 421 || ||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||||| Sbjct: 758 ctgatgtgctccaggcagtgatcatgcccattgatgtagaaatcgacaccgttttccttg 699 Query: 422 aggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactgacactcctc 481 ||||| ||||| || | | |||||||||| |||||| |||||| |||| ||||||||| Sbjct: 698 aggacaggaaggagaagctcaaggagctcctgggtgtctccatgggcactcacactcctc 639 Query: 482 atggtatgatg 492 ||||||||||| Sbjct: 638 atggtatgatg 628
>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full insert sequence Length = 1195 Score = 204 bits (103), Expect = 2e-49 Identities = 214/251 (85%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 301 |||| ||||||||| |||||||| |||||||||||||| || || ||| | || | | Sbjct: 885 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 826 Query: 302 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctg 361 || |||||||| ||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct: 825 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactgtttctgctg 766 Query: 362 ctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgccgttaaccttg 421 || ||||| ||||||||||| |||||||||||||||||||| |||| ||||| ||||| Sbjct: 765 ctgatgtgctccaggcagtgatcatgcccattgatgtagaaatcgacaccgttttccttg 706 Query: 422 aggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcactgacactcctc 481 ||||| ||||| || | | |||||||||| |||||| |||||| |||| ||||||||| Sbjct: 705 aggacaggaaggagaagctcaaggagctcctgggtgtctccatgggcactcacactcctc 646 Query: 482 atggtatgatg 492 ||||||||||| Sbjct: 645 atggtatgatg 635
>gb|AY108047.1| Zea mays PCO103710 mRNA sequence Length = 1513 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Minus Query: 232 tagctggagggacatgaacccttgcccatcataaaagaactggagcttatcatcatttgg 291 |||||||||||||||||| |||||||| || || ||||||| ||| | ||| || | || Sbjct: 1039 tagctggagggacatgaagccttgcccgtcgtagaagaacttgaggtcatcttcggtggg 980 Query: 292 ctggtagactcccctccatgcttttgaaccgcctccactagtgaagtattggattggact 351 | | ||||| |||||||| || ||||||||||| || |||||||| |||||||| || Sbjct: 979 gttctgcactcctctccatgccttggaaccgcctccgcttgtgaagtactggattgggct 920 Query: 352 gtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcgatgcc 411 || ||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||| Sbjct: 919 gtctctgctgctgatgtgttccaggcagtggtcatgcccgttgatgtagaaatcgacgcc 860 Query: 412 gttaaccttgaggaccggaagaagcaattgcaggagctcctcggtgtccccatggtcact 471 ||| ||| |||||| ||||| || | ||||| ||||||| |||||| ||||| ||||| Sbjct: 859 gttggcctggaggactggaagcagtagctgcagtagctccttggtgtcaccatgatcact 800 Query: 472 gacactcctcatggtatg 489 |||||||||||||||||| Sbjct: 799 gacactcctcatggtatg 782
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcga 407 |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 1063495 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaaatcga 1063438 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 301 |||| ||||||||| |||||||| |||||||||||||| || || ||| | || | | Sbjct: 1063682 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063623 Query: 302 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 352 || |||||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 1063622 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063572 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 443 aggagctcctcggtgtccccatggtcactgacactcctcatggtatgatg 492 |||||||||| |||||| |||||| |||| |||||||||||||||||||| Sbjct: 1063316 aggagctcctgggtgtctccatgggcactcacactcctcatggtatgatg 1063267
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcga 407 |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 60948 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaaatcga 60891 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 301 |||| ||||||||| |||||||| |||||||||||||| || || ||| | || | | Sbjct: 61135 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 61076 Query: 302 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 352 || |||||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 61075 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 61025 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 443 aggagctcctcggtgtccccatggtcactgacactcctcatggtatgatg 492 |||||||||| |||||| |||||| |||| |||||||||||||||||||| Sbjct: 60769 aggagctcctgggtgtctccatgggcactcacactcctcatggtatgatg 60720
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcga 407 |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 1063495 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaaatcga 1063438 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 301 |||| ||||||||| |||||||| |||||||||||||| || || ||| | || | | Sbjct: 1063682 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063623 Query: 302 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 352 || |||||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 1063622 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063572 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 443 aggagctcctcggtgtccccatggtcactgacactcctcatggtatgatg 492 |||||||||| |||||| |||||| |||| |||||||||||||||||||| Sbjct: 1063316 aggagctcctgggtgtctccatgggcactcacactcctcatggtatgatg 1063267
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttccaggcagtggtcatgcccattgatgtagaagtcga 407 |||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||| Sbjct: 1063492 ctgtttctgctgctgatgtgctccaggcagtgatcatgcccattgatgtagaaatcga 1063435 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaactggagcttatcatcatttggctggtagact 301 |||| ||||||||| |||||||| |||||||||||||| || || ||| | || | | Sbjct: 1063679 gacaggaacccttgtccatcatagaagaactggagcttgtcttcgttttgttgaaaaatg 1063620 Query: 302 cccctccatgcttttgaaccgcctccactagtgaagtattggattggactg 352 || |||||||| ||||| |||||||||||||||||||| || ||||||||| Sbjct: 1063619 cctctccatgcctttgatccgcctccactagtgaagtactgaattggactg 1063569 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 443 aggagctcctcggtgtccccatggtcactgacactcctcatggtatgatg 492 |||||||||| |||||| |||||| |||| |||||||||||||||||||| Sbjct: 1063313 aggagctcctgggtgtctccatgggcactcacactcctcatggtatgatg 1063264
>gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid phosphatase (PAP) mRNA, complete cds Length = 996 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 306 tccatgcttttgaaccgcctccactagtgaagtattggattggactgtttctgctgctaa 365 ||||||| |||||||| || ||||| || ||| |||||||| | ||| || |||| || | Sbjct: 805 tccatgcctttgaacctccaccactggttaagaattggatttggctgcttgtgctactta 746 Query: 366 tgtgttccaggcagtggtcatgcccattgatgta 399 ||||||||| |||||||||||||||||| ||||| Sbjct: 745 tgtgttccaagcagtggtcatgcccattaatgta 712
>dbj|AB224591.1| Aspergillus oryzae cDNA, contig sequence: AoEST1439 Length = 1018 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 459 ccccatggtcactgacactcctcat 483 |||||||||||||| |||||||||| Sbjct: 219 ccccatggtcactgccactcctcat 243
>dbj|AP007171.1| Aspergillus oryzae RIB40 genomic DNA, SC011 Length = 2505489 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 459 ccccatggtcactgacactcctcat 483 |||||||||||||| |||||||||| Sbjct: 1285385 ccccatggtcactgccactcctcat 1285361
>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence Length = 202303 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ctgtttctgctgctaatgtgttcca 374 |||||| |||||||||||||||||| Sbjct: 20173 ctgtttttgctgctaatgtgttcca 20149
>gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phosphatase precursor (PAP) mRNA, complete cds Length = 939 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 242 gacatgaacccttgcccatcataaaagaa 270 |||||||| |||||||||||||| ||||| Sbjct: 890 gacatgaatccttgcccatcatagaagaa 862
>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete sequence Length = 73587 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 cacattcaattttttcacaa 72 |||||||||||||||||||| Sbjct: 38746 cacattcaattttttcacaa 38727
>gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 307 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cattcaattttttcacaaat 74 |||||||||||||||||||| Sbjct: 60 cattcaattttttcacaaat 79
>gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 111 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 cattcaattttttcacaaat 74 |||||||||||||||||||| Sbjct: 63 cattcaattttttcacaaat 82
>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence Length = 188205 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 tgcatgtccctcattctgcagtga 131 ||||||||||||||||||| |||| Sbjct: 122569 tgcatgtccctcattctgctgtga 122546
>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase inhibitor protein Length = 2143 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gatgtagaagtcgatgccgt 413 |||||||||||||||||||| Sbjct: 1473 gatgtagaagtcgatgccgt 1454
>gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome 7, complete sequence Length = 222398 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ggaagaagcaattgcaggag 447 |||||||||||||||||||| Sbjct: 87512 ggaagaagcaattgcaggag 87493
>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence Length = 127953 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 127 agtgacataaatggagggctggaa 150 ||||||| |||||||||||||||| Sbjct: 117361 agtgacagaaatggagggctggaa 117384
>gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, complete sequence Length = 217151 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 agaaacatcataaaagatgaagtcagct 220 ||||||| ||||||| |||||||||||| Sbjct: 177012 agaaacaacataaaacatgaagtcagct 177039
>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence Length = 212484 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ggaagaagcaattgcaggag 447 |||||||||||||||||||| Sbjct: 160914 ggaagaagcaattgcaggag 160895
>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence Length = 186751 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ttctgctgctaatgtgttcc 373 |||||||||||||||||||| Sbjct: 159102 ttctgctgctaatgtgttcc 159083
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete sequence Length = 190267 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gggctggaagtggtttgttt 161 |||||||||||||||||||| Sbjct: 137014 gggctggaagtggtttgttt 136995
>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22, complete sequence Length = 209223 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 atggagggctggaagtggtt 156 |||||||||||||||||||| Sbjct: 125635 atggagggctggaagtggtt 125616
>emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, complete sequence Length = 134950 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ttctgctgctaatgtgttcc 373 |||||||||||||||||||| Sbjct: 83657 ttctgctgctaatgtgttcc 83638
>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence Length = 210223 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 193 agaaacatcataaaagatgaagtcagct 220 ||||||| ||||||| |||||||||||| Sbjct: 9356 agaaacaacataaaacatgaagtcagct 9383
>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8 Length = 159490 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ttctgctgctaatgtgttcc 373 |||||||||||||||||||| Sbjct: 35833 ttctgctgctaatgtgttcc 35814 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,443,128 Number of Sequences: 3902068 Number of extensions: 4443128 Number of successful extensions: 86038 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85838 Number of HSP's gapped (non-prelim): 198 length of query: 499 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 477 effective length of database: 17,147,199,772 effective search space: 8179214291244 effective search space used: 8179214291244 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)