| Clone Name | rbasd16c03 |
|---|---|
| Clone Library Name | barley_pub |
>RS12_HORVU (Q9XHS0) 40S ribosomal protein S12| Length = 143 Score = 191 bits (486), Expect = 5e-49 Identities = 92/93 (98%), Positives = 93/93 (100%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG Sbjct: 51 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 110 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 KARKVVGCSCIVVKDYGEE+EGLNIVQQYVKSQ Sbjct: 111 KARKVVGCSCIVVKDYGEESEGLNIVQQYVKSQ 143
>RS12C_ARATH (Q9SKZ3) 40S ribosomal protein S12-3| Length = 144 Score = 154 bits (389), Expect = 9e-38 Identities = 71/92 (77%), Positives = 84/92 (91%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK IEK AQLCVLAEDC+QPDYVKLVKALCA+H++ L+TVPSAKTLGEWAGLCKID+EG Sbjct: 52 AKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEG 111 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVKS 166 ARKVVGCSC+V+KD+GEET LNIV++++ S Sbjct: 112 NARKVVGCSCLVIKDFGEETTALNIVKKHLDS 143
>RS12A_ARATH (Q9S9P1) 40S ribosomal protein S12-1| Length = 144 Score = 152 bits (384), Expect = 4e-37 Identities = 72/93 (77%), Positives = 82/93 (88%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK IEK AQL VLAEDC+QPDYVKLVKALCA+H V L+TVPSAKTLGEWAGLCKID+EG Sbjct: 52 AKLIEKRVAQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEG 111 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 ARKVVGCSC+VVKD+GEET L+IV +++ SQ Sbjct: 112 NARKVVGCSCLVVKDFGEETTALSIVNKHIASQ 144
>RS12_ORENI (O13019) 40S ribosomal protein S12| Length = 131 Score = 132 bits (331), Expect = 5e-31 Identities = 57/93 (61%), Positives = 76/93 (81%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCVLA +CD+P YVKLV+ALCAEH ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVLAANCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 K RKVVGCSC+VVKDYG+E++ +++++Y KS+ Sbjct: 98 KPRKVVGCSCVVVKDYGKESQAKDVIEEYFKSK 130
>RS12_PIG (P46405) 40S ribosomal protein S12| Length = 131 Score = 130 bits (327), Expect = 1e-30 Identities = 56/91 (61%), Positives = 74/91 (81%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCVLA +CD+P YVKLV+ALCAEH ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 K RKVVGCSC+VVKDYG+E++ +++++Y K Sbjct: 98 KPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_CHICK (P84175) 40S ribosomal protein S12| Length = 131 Score = 130 bits (327), Expect = 1e-30 Identities = 56/91 (61%), Positives = 74/91 (81%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCVLA +CD+P YVKLV+ALCAEH ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEHQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 K RKVVGCSC+VVKDYG+E++ +++++Y K Sbjct: 98 KPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_XENLA (P47840) 40S ribosomal protein S12| Length = 131 Score = 126 bits (317), Expect = 2e-29 Identities = 55/91 (60%), Positives = 73/91 (80%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCVLA +CD+P YVKLV+ALCAE ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVLASNCDEPMYVKLVEALCAEPQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 K RKVVGCSC+VVKDYG+E++ +++++Y K Sbjct: 98 KPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_RAT (P63324) 40S ribosomal protein S12| Length = 131 Score = 126 bits (317), Expect = 2e-29 Identities = 55/91 (60%), Positives = 73/91 (80%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCVLA +CD+P YVKLV+AL AEH ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVLASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 K RKVVGCSC+VVKDYG+E++ +++++Y K Sbjct: 98 KPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_MOUSE (P63323) 40S ribosomal protein S12| Length = 131 Score = 126 bits (317), Expect = 2e-29 Identities = 55/91 (60%), Positives = 73/91 (80%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCVLA +CD+P YVKLV+AL AEH ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVLASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 K RKVVGCSC+VVKDYG+E++ +++++Y K Sbjct: 98 KPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_HUMAN (P25398) 40S ribosomal protein S12| Length = 131 Score = 122 bits (306), Expect = 4e-28 Identities = 53/91 (58%), Positives = 71/91 (78%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK+++K A LCV A +CD+P YVKLV+AL AEH ++L+ V K LGEW GLCKID EG Sbjct: 38 AKALDKRQAHLCVQASNCDEPMYVKLVEALLAEHQINLIKVDDNKKLGEWVGLCKIDREG 97 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 RKVVGCSC+VVKDYG+E++ +++++Y K Sbjct: 98 NPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 128
>RS12_CYAPA (Q9SMI3) 40S ribosomal protein S12| Length = 136 Score = 121 bits (304), Expect = 7e-28 Identities = 52/93 (55%), Positives = 73/93 (78%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 AK++++ +AQLCVLA + ++P Y +LV+ALCAEH ++L+ VP K LGEW GLCKID EG Sbjct: 44 AKALDQRSAQLCVLAANVNEPAYTRLVEALCAEHGINLIKVPENKQLGEWVGLCKIDKEG 103 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 KARKVVGCSC V+ +GEE+E ++ +Y+K + Sbjct: 104 KARKVVGCSCAVITKFGEESEARQVLMEYLKKR 136
>RS12_DROME (P80455) 40S ribosomal protein S12| Length = 139 Score = 115 bits (288), Expect = 5e-26 Identities = 51/90 (56%), Positives = 69/90 (76%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K+++K A LC+LAE D+P+Y KLV ALC EH + L+ V S K LGEW+GLCKID EGK Sbjct: 47 KALDKRQAVLCILAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGK 106 Query: 258 ARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 RKV GCS +V+KD+GEET L++V+ +++ Sbjct: 107 PRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
>RS12_CAEEL (P49196) 40S ribosomal protein S12| Length = 140 Score = 109 bits (273), Expect = 3e-24 Identities = 50/92 (54%), Positives = 65/92 (70%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K+++K A CVLAE+CD+P YVKLV+ LCAEH + L+ V K +GE+ GLCK D EGK Sbjct: 48 KALDKREAHFCVLAENCDEPQYVKLVETLCAEHQIPLIKVADKKIIGEYCGLCKYDKEGK 107 Query: 258 ARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 ARKVVGCS VV ++G E +G I+ Y S+ Sbjct: 108 ARKVVGCSSAVVTNWGNEEQGRAILTDYFASK 139
>RS12A_SCHPO (O14062) 40S ribosomal protein S12-A| Length = 145 Score = 107 bits (268), Expect = 1e-23 Identities = 48/83 (57%), Positives = 60/83 (72%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 +K++++ A LCVL E CDQ YVKLV+ALCAE L+ V K LGEWAGLC +D +G Sbjct: 54 SKALDRRQAHLCVLCESCDQEAYVKLVEALCAESETPLIKVADPKVLGEWAGLCVLDRDG 113 Query: 261 KARKVVGCSCIVVKDYGEETEGL 193 ARKVVGCSC+ V DYGE++ L Sbjct: 114 NARKVVGCSCVAVTDYGEDSAAL 136
>RS12B_SCHPO (O74322) 40S ribosomal protein S12-B| Length = 148 Score = 107 bits (267), Expect = 1e-23 Identities = 49/83 (59%), Positives = 60/83 (72%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 +K++++ A LCVL E CDQ YVKLV+ALCAE LV V K LGEWAGLC +D +G Sbjct: 57 SKALDRRQAHLCVLCESCDQEAYVKLVEALCAESQTPLVKVADPKILGEWAGLCVLDRDG 116 Query: 261 KARKVVGCSCIVVKDYGEETEGL 193 ARKVVGCSC+ V DYGE++ L Sbjct: 117 NARKVVGCSCVAVTDYGEDSVAL 139
>RS12_ERYGR (O59936) 40S ribosomal protein S12| Length = 132 Score = 105 bits (263), Expect = 4e-23 Identities = 45/93 (48%), Positives = 67/93 (72%) Frame = -3 Query: 441 AKSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEG 262 +K++++ A +CVL E C++ Y KL+ ALC+EH + L+ VP K LGEWAGLC +D EG Sbjct: 39 SKALDRREAHMCVLNEACEEEAYKKLIVALCSEHKIPLIKVPDGKQLGEWAGLCVLDREG 98 Query: 261 KARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 ARKVV CSC+VVK++GEE+ ++ Y +++ Sbjct: 99 NARKVVNCSCVVVKNWGEESSERMMLLNYFQTE 131
>RS12_TRYBB (Q03253) 40S ribosomal protein S12| Length = 143 Score = 85.5 bits (210), Expect = 5e-17 Identities = 34/83 (40%), Positives = 58/83 (69%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 +++++ A LCVLA+DC+ +Y KLV AL ++N+ LV++ + L +WAGL ++ +G Sbjct: 54 RALDRRTAHLCVLADDCEDEEYKKLVTALAKQNNIDLVSMDEREKLAQWAGLTRMAADGS 113 Query: 258 ARKVVGCSCIVVKDYGEETEGLN 190 RK + CSC+ V+D+GE T+ L+ Sbjct: 114 VRKTLKCSCLAVRDFGERTKALD 136
>RS12_PLAF7 (O97249) 40S ribosomal protein S12| Length = 141 Score = 84.7 bits (208), Expect = 9e-17 Identities = 39/80 (48%), Positives = 55/80 (68%), Gaps = 1/80 (1%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPS-AKTLGEWAGLCKIDTEG 262 KSIE A++C L++ C +P Y KL+ LCAE N+ L V + +K LG WAGL K+D EG Sbjct: 47 KSIESQEAKVCFLSDVCSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEG 106 Query: 261 KARKVVGCSCIVVKDYGEET 202 ARK++G S + V D+GE++ Sbjct: 107 NARKIIGASSVAVVDFGEDS 126
>RS12_YEAST (P48589) 40S ribosomal protein S12| Length = 143 Score = 79.3 bits (194), Expect = 4e-15 Identities = 42/94 (44%), Positives = 60/94 (63%), Gaps = 2/94 (2%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALC--AEHNVHLVTVPSAKTLGEWAGLCKIDTE 265 K++ + A L VL + + +KLV+ L E+ V L+ V AK LGEWAGL KID E Sbjct: 50 KALTRGEALLVVLVSSVTEANIIKLVEGLANDPENKVPLIKVADAKQLGEWAGLGKIDRE 109 Query: 264 GKARKVVGCSCIVVKDYGEETEGLNIVQQYVKSQ 163 G ARKVVG S +VVK++G ET+ L+++ ++ Q Sbjct: 110 GNARKVVGASVVVVKNWGAETDELSMIMEHFSQQ 143
>RL7A_AERPE (Q9YAX7) 50S ribosomal protein L7Ae| Length = 127 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/52 (46%), Positives = 33/52 (63%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L V+AED D P+ V + LC E + V VPS K LGE AG+ Sbjct: 41 KAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGI 92
>RL7A_PYRKO (Q5JGR3) 50S ribosomal protein L7Ae| Length = 123 Score = 46.6 bits (109), Expect = 3e-05 Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 6/80 (7%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CK 277 K++E+ A+L ++AED D + V + LC E + V VPS K LG AGL Sbjct: 41 KAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYVYVPSKKELGAAAGLEVPAASVA 100 Query: 276 IDTEGKARKVVGCSCIVVKD 217 I GKAR++V + VK+ Sbjct: 101 IIEPGKARELVEDIAMKVKE 120
>RL7A_PYRFU (Q8U160) 50S ribosomal protein L7Ae| Length = 123 Score = 44.3 bits (103), Expect = 1e-04 Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CK 277 K++E+ A+L ++AED D + V + LC E + + VPS K LG AG+ Sbjct: 41 KAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVA 100 Query: 276 IDTEGKARKVVGCSCIVVKD 217 I GKAR +V + VK+ Sbjct: 101 IIEPGKARDLVEEIAMKVKE 120
>RL7A_PYRAE (Q8ZTA5) 50S ribosomal protein L7Ae| Length = 151 Score = 44.3 bits (103), Expect = 1e-04 Identities = 22/52 (42%), Positives = 33/52 (63%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L ++AED D P+ V + LC E V V VPS + LG+ AG+ Sbjct: 56 KAVERGLAKLVLIAEDVDPPEVVAHLPLLCEEKKVPYVYVPSKEKLGKAAGI 107
>RL7A_ARCFU (O29494) 50S ribosomal protein L7Ae| Length = 119 Score = 43.5 bits (101), Expect = 2e-04 Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CK 277 K++E+ A+L +AED D P+ V + LC E NV + V S LG G+ Sbjct: 37 KAVERGLAKLVYIAEDVDPPEIVAHLPLLCEEKNVPYIYVKSKNDLGRAVGIEVPCASAA 96 Query: 276 IDTEGKARKVVG 241 I EG+ RK +G Sbjct: 97 IINEGELRKELG 108
>RL7A_PYRHO (P62009) 50S ribosomal protein L7Ae| Length = 123 Score = 43.5 bits (101), Expect = 2e-04 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CK 277 K++E+ A+L ++AED D + V + LC E + + VPS K LG AG+ Sbjct: 41 KAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVA 100 Query: 276 IDTEGKARKVV 244 I GKAR +V Sbjct: 101 IIEPGKARDLV 111
>RL7A_PYRAB (P62008) 50S ribosomal protein L7Ae| Length = 123 Score = 43.5 bits (101), Expect = 2e-04 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL------CK 277 K++E+ A+L ++AED D + V + LC E + + VPS K LG AG+ Sbjct: 41 KAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVAAASVA 100 Query: 276 IDTEGKARKVV 244 I GKAR +V Sbjct: 101 IIEPGKARDLV 111
>RL7A_SULAC (Q4J8P1) 50S ribosomal protein L7Ae| Length = 126 Score = 43.1 bits (100), Expect = 3e-04 Identities = 22/52 (42%), Positives = 31/52 (59%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L V+AED + V + LC E + V VPS K+LGE GL Sbjct: 41 KAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGL 92
>RL7A_NANEQ (P62427) 50S ribosomal protein L7Ae| Length = 125 Score = 43.1 bits (100), Expect = 3e-04 Identities = 21/52 (40%), Positives = 34/52 (65%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L ++AE+ + P+ V + ALC E V V VPS + LG+ AG+ Sbjct: 42 KAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKAAGI 93
>RL7A_SULTO (Q971C9) 50S ribosomal protein L7Ae| Length = 126 Score = 40.0 bits (92), Expect = 0.003 Identities = 21/52 (40%), Positives = 29/52 (55%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L V+A D + V + LC E + V VPS K LGE GL Sbjct: 41 KAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGL 92
>RL7A_SULSO (P55858) 50S ribosomal protein L7Ae| Length = 127 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/52 (38%), Positives = 29/52 (55%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L ++AED + V + LC E + V V S K LGE GL Sbjct: 41 KAVERGQAKLVIIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGL 92
>RL7A_METKA (Q8TV03) 50S ribosomal protein L7Ae| Length = 123 Score = 38.5 bits (88), Expect = 0.007 Identities = 20/52 (38%), Positives = 29/52 (55%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A L ++AED D + V + LC E + V VPS LG AG+ Sbjct: 41 KAVEREEAVLVLIAEDVDPEEVVAHLPELCDEKGIPYVYVPSKDELGAAAGI 92
>RL7A_THEVO (Q97BK8) 50S ribosomal protein L7Ae| Length = 121 Score = 38.1 bits (87), Expect = 0.010 Identities = 23/80 (28%), Positives = 37/80 (46%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 KSIE+ ++L V+AED + P+ V + +LC + V V V LG G Sbjct: 40 KSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVG--------- 90 Query: 258 ARKVVGCSCIVVKDYGEETE 199 + + + + DYG+ E Sbjct: 91 ---IASAASVSIVDYGKNEE 107
>RL7A_THEAC (Q9HJ56) 50S ribosomal protein L7Ae| Length = 121 Score = 38.1 bits (87), Expect = 0.010 Identities = 23/80 (28%), Positives = 37/80 (46%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 KSIE+ ++L V+AED + P+ V + +LC + V V V LG G Sbjct: 40 KSIERGESKLVVIAEDVNPPEVVYYLPSLCEDKKVPYVYVKKKADLGSKVG--------- 90 Query: 258 ARKVVGCSCIVVKDYGEETE 199 + + + + DYG+ E Sbjct: 91 ---IASAASVSIVDYGKNEE 107
>RL7A_METTH (O26355) 50S ribosomal protein L7Ae| Length = 123 Score = 37.7 bits (86), Expect = 0.013 Identities = 24/82 (29%), Positives = 42/82 (51%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K++E+ AQL ++AED + + V + L E + + +P+ LG AGL + T Sbjct: 41 KAVERGVAQLVLIAEDVEPAEIVAHLPLLAEEKEIPYIYIPTKDELGAAAGL-NVGTASS 99 Query: 258 ARKVVGCSCIVVKDYGEETEGL 193 A G + ++K+ E+ E L Sbjct: 100 AIVEAGDAEDLIKEIIEKVEEL 121
>RXL7_CLOAB (Q97EH1) Putative ribosomal protein L7Ae-like| Length = 79 Score = 35.4 bits (80), Expect = 0.063 Identities = 21/65 (32%), Positives = 36/65 (55%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K+I + AQ+ +A+D + + + V+ L EH++ +V V + K LG+ LC ID E Sbjct: 18 KAINEKKAQMVYIAKDAES-ELFQTVEKLANEHSLQIVYVDTMKELGK---LCNIDVEAS 73 Query: 258 ARKVV 244 V+ Sbjct: 74 TAVVL 78
>NHP2_YEAST (P32495) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP| protein NHP2) (High mobility group-like nuclear protein 2) Length = 156 Score = 35.0 bits (79), Expect = 0.082 Identities = 24/91 (26%), Positives = 41/91 (45%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K++ K L V+A D D + + LC +H+V + +PS + LG AG K T Sbjct: 65 KALRKGEKGLVVIAGDISPADVISHIPVLCEDHSVPYIFIPSKQDLGA-AGATKRPTS-- 121 Query: 258 ARKVVGCSCIVVKDYGEETEGLNIVQQYVKS 166 +V ++ +G N ++Y +S Sbjct: 122 -------VVFIVPGSNKKKDGKNKEEEYKES 145
>RL7A_METJA (P54066) 50S ribosomal protein L7Ae| Length = 117 Score = 34.7 bits (78), Expect = 0.11 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 283 K++E+ A+L ++AED + V + LC E + V S + LG+ AGL Sbjct: 36 KAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAGL 87
>RL7A_METMP (P62426) 50S ribosomal protein L7Ae| Length = 117 Score = 34.3 bits (77), Expect = 0.14 Identities = 25/82 (30%), Positives = 41/82 (50%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K++EK A+L V+A+D + V + +C E + + + LG+ AGL ++ T Sbjct: 36 KAVEKGIAKLVVIAQDVQPEEIVAHIPVICDEKGIAYSYSSTKEALGKAAGL-EVPTSAI 94 Query: 258 ARKVVGCSCIVVKDYGEETEGL 193 A G S +KD E+ GL Sbjct: 95 AVVAEG-SADELKDLVEKLNGL 115
>RL7A_PICTO (Q6KZI7) 50S ribosomal protein L7Ae| Length = 127 Score = 34.3 bits (77), Expect = 0.14 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 1/88 (1%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 KSIE+ ++L V+AED + V + LC E V V V LG G Sbjct: 39 KSIERGESKLVVIAEDVSPAEVVYYLPTLCEERKVPYVYVKKKSDLGLKVG--------- 89 Query: 258 ARKVVGCSCIVVKDYGEETEGL-NIVQQ 178 + + + + DYG+ + +IV Q Sbjct: 90 ---IASAASVSIVDYGKNDDAYKSIVSQ 114
>RL7A_HALMA (P12743) 50S ribosomal protein L7Ae (Hs6)| Length = 119 Score = 33.5 bits (75), Expect = 0.24 Identities = 25/77 (32%), Positives = 33/77 (42%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 KSIE+ +A+L +AED + V + L E V + V LG AGL Sbjct: 38 KSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAGL-------- 89 Query: 258 ARKVVGCSCIVVKDYGE 208 VG + V D GE Sbjct: 90 ---EVGSAAAAVTDAGE 103
>SNU13_YEAST (P39990) 13 kDa ribonucleoprotein-associated protein| Length = 126 Score = 33.5 bits (75), Expect = 0.24 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCK 277 K++ + ++ ++A DC+ + + + LC + NV V VPS LG G+ + Sbjct: 42 KTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSR 95
>RL7A_HALSA (Q9HQH8) 50S ribosomal protein L7Ae| Length = 120 Score = 32.0 bits (71), Expect = 0.70 Identities = 23/82 (28%), Positives = 39/82 (47%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K+IE+ A + +AED + V + L AE + +V V + LG AGL ++ + Sbjct: 39 KAIERGNADIVFVAEDVSPEEIVMHLPELAAEKGIEVVFVETQDELGNAAGL-EVGSAAA 97 Query: 258 ARKVVGCSCIVVKDYGEETEGL 193 A G + ++D + E L Sbjct: 98 AVVAAGDAEDEIEDISTKVEDL 119
>NHPX_DROME (Q9U3Z7) NHP2-like protein (Hoi-polloi protein)| Length = 127 Score = 32.0 bits (71), Expect = 0.70 Identities = 22/90 (24%), Positives = 42/90 (46%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K++ + A + VLA D + + + + LC + NV V V S + LG G+ Sbjct: 43 KTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRACGV-------- 94 Query: 258 ARKVVGCSCIVVKDYGEETEGLNIVQQYVK 169 +R +V CS + + + + +QQ ++ Sbjct: 95 SRPIVACS-VTTNEGSQLKSQITSIQQEIE 123
>NOLA2_CAEBR (Q60YI3) Putative H/ACA ribonucleoprotein complex subunit 2-like| protein Length = 163 Score = 32.0 bits (71), Expect = 0.70 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 K + K+ +C+LA + D + A+C E + V +PS + LG Sbjct: 78 KELRKNEKGICILAGNVSPIDVYSHIPAICEEKEIPYVYIPSREQLG 124
>NOLA2_ARATH (Q9LEY9) H/ACA ribonucleoprotein complex subunit 2-like protein| (Nhp2-like protein) Length = 156 Score = 31.2 bits (69), Expect = 1.2 Identities = 21/57 (36%), Positives = 28/57 (49%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDT 268 KSI + LCV+A + D + + LC E V V VPS + L + AG K T Sbjct: 60 KSIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQ-AGATKRPT 115
>NHP2_SCHPO (Q9P7H0) H/ACA ribonucleoprotein complex subunit 2 (H/ACA snoRNP| protein NHP2) (High mobility group-like nuclear protein 2) (P17-nhp2) Length = 154 Score = 30.8 bits (68), Expect = 1.6 Identities = 24/91 (26%), Positives = 44/91 (48%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGK 259 K++ K L +LA D D + + LC ++NV + S + LGE A K T Sbjct: 63 KAVRKGEKGLVILAGDISPMDVISHIPVLCEDNNVPYLYTVSKELLGE-ASNTKRPT--- 118 Query: 258 ARKVVGCSCIVVKDYGEETEGLNIVQQYVKS 166 SC+++ G++ + ++ V++Y +S Sbjct: 119 -------SCVMIVPGGKKKD-MSKVEEYKES 141
>Y3524_METAC (Q8TK90) Putative HTH-type transcriptional regulatory protein| MA3524 Length = 328 Score = 30.8 bits (68), Expect = 1.6 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%) Frame = +1 Query: 61 LETCNSXSPRNKSIIKPRHQNAQHKFCMMKHSQLLRLDILLHDVKALGFFTIVLDNNAXA 240 L++C S PR K+ +P ++ Q +KH+ LL D++L+ + LG+ + Sbjct: 190 LKSCGSRKPRKKA--EPEKEDPQ-----VKHNALLPEDLILNTISMLGY-------DVLP 235 Query: 241 AYNLPCLALSVDLAKPCPLSES-FSTWHSNQVNIVLSA*CLNKLHVIRLVTILSQHTKLS 417 P A+S D + S F+T + +++ S C+ + + V I++ +KL Sbjct: 236 TAQAPFKAISRDKSSVILTGVSEFNTTVVKRAHLMSSISCITE---TQSVFIINGRSKLK 292 Query: 418 SM 423 S+ Sbjct: 293 SV 294
>ANM1_RAT (Q63009) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| Length = 353 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -3 Query: 342 HNVHLVTVPSAKTLGEWAG-LCKIDTEGKARKVVGCSCIVVKDY 214 HN HL +G G LC + ARKV+G C + DY Sbjct: 64 HNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDY 107
>HYM1_YEAST (P32464) Protein HYM1| Length = 399 Score = 30.4 bits (67), Expect = 2.0 Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Frame = +1 Query: 145 MKHSQLLRLDILLHDVKALGFFTIV-LDNNAXAAYNLPCLALSVDLAKPCPLSESFSTWH 321 +K+ QL R I+L D + FF L N + +L L+ + A P +S+ F Sbjct: 169 IKYEQLCR--IILKDPQLWKFFEFAKLGNFEISTESLQILSAAFT-AHPKLVSKEF---F 222 Query: 322 SNQVNIVLSA*CLNKLHVIRLVTILSQHTKLSSMLL 429 SN++NI+ C+NKL Q TKL + L+ Sbjct: 223 SNEINIIRFIKCINKLMAHGSYVTKRQSTKLLASLI 258
>RL7A_DROME (P46223) 60S ribosomal protein L7a| Length = 271 Score = 30.4 bits (67), Expect = 2.0 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 K IE+ AQL V+A D D + V + ALC + V V LG Sbjct: 150 KLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>ANM1_MOUSE (Q9JIF0) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| Length = 371 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -3 Query: 342 HNVHLVTVPSAKTLGEWAG-LCKIDTEGKARKVVGCSCIVVKDY 214 HN HL +G G LC + ARKV+G C + DY Sbjct: 82 HNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDY 125
>T4BB_BACCO (Q07606) Restriction enzyme BgcI beta subunit (EC 3.1.21.-)| (S.BcgI) Length = 341 Score = 30.0 bits (66), Expect = 2.7 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%) Frame = +1 Query: 208 FTIVLDNNAXAAYN--LPCLALSVDLAKPCPLSESFSTWHSNQVNIVLSA*CLNKLHVIR 381 F ++D Y+ LP + + + +KP + F + +VNI + LN+ H++ Sbjct: 48 FEFMIDGEKEKLYSGKLPVITIGNETSKP--FVQEFHFFTGTKVNICIPKLDLNRNHLLY 105 Query: 382 LVTILSQHTKLSS 420 + T++ TK+ S Sbjct: 106 ITTMIENATKMFS 118
>RL7A_CHICK (P32429) 60S ribosomal protein L7a| Length = 265 Score = 30.0 bits (66), Expect = 2.7 Identities = 22/79 (27%), Positives = 31/79 (39%) Frame = -3 Query: 432 IEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKAR 253 +E AQL V+A D D + V + ALC + V + S LG R Sbjct: 146 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKSKARLGRLV----------HR 195 Query: 252 KVVGCSCIVVKDYGEETEG 196 K C+C+ E +G Sbjct: 196 KT--CTCVAFTQVNPEDKG 212
>ANM1_HUMAN (Q99873) Protein arginine N-methyltransferase 1 (EC 2.1.1.-)| (Interferon receptor 1-bound protein 4) Length = 361 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = -3 Query: 342 HNVHLVTVPSAKTLGEWAG-LCKIDTEGKARKVVGCSCIVVKDY 214 HN HL +G G LC + ARKV+G C + DY Sbjct: 72 HNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIVCSSISDY 115
>RL7A_ARATH (P49692) 60S ribosomal protein L7a| Length = 257 Score = 29.6 bits (65), Expect = 3.5 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 432 IEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 IE++ AQL V+A D D + V + ALC + V V LG Sbjct: 138 IEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLG 182
>Y080_PYRFU (Q8U4K5) UPF0100 protein PF0080| Length = 345 Score = 29.6 bits (65), Expect = 3.5 Identities = 10/30 (33%), Positives = 21/30 (70%) Frame = -3 Query: 378 DYVKLVKALCAEHNVHLVTVPSAKTLGEWA 289 DY+ + K++ +HN+ +T+PS LG+++ Sbjct: 231 DYIFIYKSVAKQHNLSYITLPSEINLGDFS 260
>RL7A_ANOGA (O76732) 60S ribosomal protein L7a| Length = 271 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/47 (31%), Positives = 23/47 (48%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 K +E+ AQL ++A D D + V + ALC + V + LG Sbjct: 151 KMVEQKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLG 197
>NOLA2_CAEEL (Q9XXD4) Putative H/ACA ribonucleoprotein complex subunit 2-like| protein Length = 163 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/47 (25%), Positives = 23/47 (48%) Frame = -3 Query: 438 KSIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 K + ++ +C+LA + D + +C E + V +PS + LG Sbjct: 78 KELRRNEKGICILAGNVSPIDVYSHIPGICEEKEIPYVYIPSREQLG 124
>RL7A_CAEEL (Q966C6) 60S ribosomal protein L7a| Length = 264 Score = 28.9 bits (63), Expect = 5.9 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -3 Query: 432 IEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 +E AQL ++A D + + V + ALC ++NV + +LG Sbjct: 147 VETRRAQLVLIAHDVNPLEIVLHLPALCRKYNVPYAIIKGKASLG 191
>YGK9_YEAST (P53138) Hypothetical 12.4 kDa protein in TAF60-MLC1 intergenic| region Length = 107 Score = 28.9 bits (63), Expect = 5.9 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +1 Query: 280 AKPCPLSESFSTWHSNQVNIVLS 348 ++P PLSES+ TWH+ ++ L+ Sbjct: 61 SRPLPLSESYETWHALELAFCLT 83
>RL7A_ORYSA (P35685) 60S ribosomal protein L7a| Length = 258 Score = 28.5 bits (62), Expect = 7.7 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 Query: 432 IEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 IE+ AQL V+A D D + V + ALC + V V LG Sbjct: 139 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLG 183
>RL7A_ICTPU (Q90YW2) 60S ribosomal protein L7a| Length = 265 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = -3 Query: 432 IEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLG 298 +E AQL V+A D D + V + ALC + V V LG Sbjct: 146 VESKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKARLG 190 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,036,823 Number of Sequences: 219361 Number of extensions: 1057423 Number of successful extensions: 2517 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 2481 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2515 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)