| Clone Name | rbasd15m24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MATK_CHEBH (Q5J2X4) Maturase K (Intron maturase) | 30 | 2.2 |
|---|
>MATK_CHEBH (Q5J2X4) Maturase K (Intron maturase)| Length = 505 Score = 29.6 bits (65), Expect = 2.2 Identities = 16/71 (22%), Positives = 32/71 (45%) Frame = +2 Query: 5 ILFEVHNHFNSQQKRLMTSHALFSHKLLMFPRSINQTNQVNKVCAPNGIVAVIKTKQCKP 184 I + H Q R A H L F + + +N + PN +++ +K + + Sbjct: 151 ITYPAHLEILVQTLRYWVKDASSLHLLRFF---LYEYRNLNSLITPNQLISFLKKRNQRL 207 Query: 185 FIF*FHWHRCD 217 F+F +++H C+ Sbjct: 208 FLFLYNFHVCE 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,979,036 Number of Sequences: 219361 Number of extensions: 461231 Number of successful extensions: 825 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 820 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 825 length of database: 80,573,946 effective HSP length: 53 effective length of database: 68,947,813 effective search space used: 1654747512 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)