ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15f17 |
|---|---|
| Clone Library Name | barley_pub |
>NU2M_MUNMN (Q85PS1) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 30.0 bits (66), Expect = 1.7 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + TF+++ Y +TTT L L WN+ P Sbjct: 205 LTIYIIMTTTTFMLFMYNSTTTTLSLSQTWNKAP 238
>NU2M_POTFL (Q2TGY5) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 29.6 bits (65), Expect = 2.2 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 46 TAALALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 T L + + + TF+++ Y ++TT L L + WN+ P Sbjct: 202 TLNLMMYIVMTLSTFMLFMYSSSTTTLSLSHAWNKFP 238
>NU2M_PARHE (Q85PQ0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 29.3 bits (64), Expect = 2.9 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + + TF+++ + +TTT L L WN++P Sbjct: 205 LIIYIMMTLSTFMLFMHNSTTTTLALSQTWNKMP 238
>NU2M_VULVU (Q534D9) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L+L + + TF+++ +TT L L + WN++P Sbjct: 205 LSLYILMTLSTFMLFMLSASTTTLSLSHTWNKIP 238
>NU2M_AILME (Q534B1) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.9 bits (63), Expect = 3.8 Identities = 11/34 (32%), Positives = 21/34 (61%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + + TF+++ + ++TT L L Y WN+ P Sbjct: 205 LTIYIMMTLGTFMLFMHSSSTTTLSLSYTWNKFP 238
>NU2M_MYOKI (Q2TQ13) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVPRCSV 168 L L + F+++ Y +TTT L L WN+ P +V Sbjct: 205 LLLYILMTTSMFMMFMYNSTTTTLSLSLTWNKTPLMTV 242
>NU2M_GENSE (Q85PP8) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.5 bits (62), Expect = 5.0 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + + TF+++ +TTT L L WN++P Sbjct: 205 LTIYIIMTLTTFMLFMLNSTTTTLSLSQTWNKMP 238
>NU2M_CYNPE (Q85PQ7) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.5 bits (62), Expect = 5.0 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + TF+++ Y ++TT L L WN+ P Sbjct: 205 LTIYIIMTSTTFMLFMYNSSTTTLSLSQTWNKAP 238
>NU2M_AILFU (Q534E0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.5 bits (62), Expect = 5.0 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + + TF+++ Y ++ T L L Y WN+ P Sbjct: 205 LVMYIMMTLGTFMLFMYNSSLTTLSLSYSWNKFP 238
>NU2M_MARZI (Q2TGY2) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 LA+ + + TF+++ ++TT L L + WN++P Sbjct: 205 LAIYIMMTLGTFMLFMLNSSTTTLSLSHVWNKLP 238
>NU2M_MARFA (Q2TGY3) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/34 (32%), Positives = 22/34 (64%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 LA+ + + TF+++ ++TT L L + WN++P Sbjct: 205 LAIYIMMTLGTFMLFMLNSSTTTLSLSHVWNKLP 238
>NU2M_CANRF (Q2TGY6) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L L + + TF+++ ++TT L L + WN+ P Sbjct: 205 LVLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFP 238
>NU2M_CANFA (Q9ZZ65) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 28.1 bits (61), Expect = 6.5 Identities = 11/34 (32%), Positives = 20/34 (58%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L L + + TF+++ ++TT L L + WN+ P Sbjct: 205 LTLYILMTLSTFMLFMLNSSTTTLSLSHMWNKFP 238
>NU2M_NASNA (Q2TGY4) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 27.7 bits (60), Expect = 8.4 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L + + +TF ++ Y +TT L L + WN+ P Sbjct: 205 LMIYILMTFVTFTLFAYSKSTTTLSLSHTWNKSP 238
>NU2M_MUSKA (Q2TGY1) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 347 Score = 27.7 bits (60), Expect = 8.4 Identities = 10/34 (29%), Positives = 22/34 (64%) Frame = +1 Query: 55 LALQVCTRMLTFIVYHYRTTTTPLCLIYWWNEVP 156 L++ + + TF+++ + ++TT L L WN++P Sbjct: 205 LSIYITMTLGTFMLFMFNSSTTTLSLSLTWNKLP 238
>MIAA_CLOAB (Q97I21) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 309 Score = 27.7 bits (60), Expect = 8.4 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +3 Query: 33 LYRFNGGTCSASLHQNVDIYCIPLQNYYYTTMLD 134 +Y+ G T S L+ NVD+Y IP +Y+ +D Sbjct: 167 VYKITGKTIS-ELNSNVDLYDIPYNIHYFILNMD 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,494,688 Number of Sequences: 219361 Number of extensions: 489609 Number of successful extensions: 1097 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1082 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1096 length of database: 80,573,946 effective HSP length: 48 effective length of database: 70,044,618 effective search space used: 1681070832 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
