ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd15e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y4NK_RHISN (P55583) Hypothetical 72.8 kDa protein y4nK 30 1.2
2Y570_METJA (Q57990) Hypothetical protein MJ0570 28 6.1

>Y4NK_RHISN (P55583) Hypothetical 72.8 kDa protein y4nK|
          Length = 662

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 76  WACPQHQVRPLSSFDWXDFF*QWILTAPWVPGHIF 180
           W  P+H ++             WI+ APWVP H+F
Sbjct: 248 WMAPEHGLQT------------WIIQAPWVPQHVF 270



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>Y570_METJA (Q57990) Hypothetical protein MJ0570|
          Length = 223

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 146 YSLRRGFQVTYLYGVNSENRVXFPFFL 226
           ++L+ GF V YL  V SEN+  + F +
Sbjct: 19  WALKEGFDVKYLVNVESENKESYMFHI 45


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,742,453
Number of Sequences: 219361
Number of extensions: 439040
Number of successful extensions: 810
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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