ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd14o21 |
|---|---|
| Clone Library Name | barley_pub |
>GLXR_ECOLI (P77161) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 292 Score = 75.5 bits (184), Expect = 2e-13 Identities = 43/152 (28%), Positives = 77/152 (50%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 I+ GD+A+++ + P F++LGK +G G+G K+ +I+ + A SE L A K Sbjct: 133 IMVGGDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASK 192 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 372 +G P + L G ++ + ++ G M++ ++NP F + QKD+ LAL A++ Sbjct: 193 AGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLALQSAKALALN 252 Query: 371 MPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 +P + G LD SA+ + L+ Sbjct: 253 LPNTATCQELFNTCAANGGSQLDHSALVQALE 284
>YKWC_BACSU (O34948) Hypothetical oxidoreductase ykwC (EC 1.1.-.-)| Length = 288 Score = 71.6 bits (174), Expect = 2e-12 Identities = 37/122 (30%), Positives = 62/122 (50%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 I+ G+K ++ +P F ++G+ + G G+G K+ + + + M +E + A K Sbjct: 136 IMVGGEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQK 195 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 372 SGL P+ +L + GA + P MLQG++ P F +KH KDM +AL + Sbjct: 196 SGLEPENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEEAELMGEE 255 Query: 371 MP 366 MP Sbjct: 256 MP 257
>GARR_ECOLI (P0ABQ2) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 64.7 bits (156), Expect = 3e-10 Identities = 38/147 (25%), Positives = 64/147 (43%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 ++ GDKA++D + GE+G G KL +I+ + A SE L LA K Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 372 +G++P + + G + + K P ++ ++ P F + KD+ AL Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253 Query: 371 MPVXXXXXXXXXXARSLGLGDLDFSAV 291 +P+ R+ GLG D SA+ Sbjct: 254 LPLTAAVMEMMQALRADGLGTADHSAL 280
>GARR_ECOL6 (P0ABQ3) 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)| (Tartronate semialdehyde reductase) (TSAR) Length = 294 Score = 64.7 bits (156), Expect = 3e-10 Identities = 38/147 (25%), Positives = 64/147 (43%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 ++ GDKA++D + GE+G G KL +I+ + A SE L LA K Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 372 +G++P + + G + + K P ++ ++ P F + KD+ AL Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253 Query: 371 MPVXXXXXXXXXXARSLGLGDLDFSAV 291 +P+ R+ GLG D SA+ Sbjct: 254 LPLTAAVMEMMQALRADGLGTADHSAL 280
>YFJR_BACSU (O34969) Hypothetical oxidoreductase yfjR (EC 1.1.-.-)| Length = 261 Score = 60.1 bits (144), Expect = 7e-09 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 2/154 (1%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKM-KLVVNMIMGSMMNAFSEGLCLAD 555 I+ AG P D L ++ F +GE A K+ +N ++ SM+ A SE + + Sbjct: 109 IITAGPAEAKQAAKPLLDSLSQQIFDVGEESKTANAAKISINFLLVSMLEALSESFLMME 168 Query: 554 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPA-FPLKHQQKDMRLALSLGDENA 378 K GL + L++ +P+++ G M + + PA F + KD LAL+ + Sbjct: 169 KYGLEQKQFLEIAS-ALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAAKRVS 227 Query: 377 VSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 ++P+ G GDLD++A+ + +K Sbjct: 228 ANLPLAELAKSHFESGIEKGFGDLDWAALIKCIK 261
>Y229_SYNY3 (Q55702) Hypothetical oxidoreductase slr0229 (EC 1.1.-.-)| Length = 290 Score = 60.1 bits (144), Expect = 7e-09 Identities = 30/109 (27%), Positives = 57/109 (52%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 I+ GD + +++ +P +G+K G G+G +KL ++ G A +E + L+++ Sbjct: 139 IMVGGDISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQ 198 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRL 405 G++P+ ++D GA + P M + + P F +KH KD+RL Sbjct: 199 LGIAPELVIDTCGSGAAGSWALTNLAPKMSEADFAPGFMVKHLLKDLRL 247
>YIHU_SALTY (Q9L7S0) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 56.2 bits (134), Expect = 1e-07 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 2/155 (1%) Frame = -3 Query: 734 VILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLA 558 ++LA G + P +G + G G G ++KL+ N M +NA S E L Sbjct: 134 LLLAGGTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLI-NNYMSIALNALSAEAAVLC 192 Query: 557 DKSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDEN 381 + GLS L V+ A F P+ +++G +PAF + KD+ +AL + ++ Sbjct: 193 EALGLSFDVALKVMSGTAAGKGHFTTTWPNKVMKGDLSPAFMIDLAHKDLGIALDVANQL 252 Query: 380 AVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 V MP+ AR+ G G D+SA+ E ++ Sbjct: 253 HVPMPLGAASREVYNLARAAGRGREDWSAILEQVR 287
>Y1010_HAEIN (P44979) Hypothetical oxidoreductase HI1010 (EC 1.1.-.-)| Length = 301 Score = 54.7 bits (130), Expect = 3e-07 Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGE-MGNGAKMKLVVNMIMGSMMNAFSEGLCLAD 555 ++A+G K ++ + P D K + +GE +G GA +K+V ++ G + A +E + LA Sbjct: 140 VMASGSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALAS 199 Query: 554 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAV 375 K+G+ + DV+ A + MF+ + +++G Y P + KD+ L Sbjct: 200 KAGIPLDVMYDVVTNAAGNSWMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLHF 259 Query: 374 SMPVXXXXXXXXXXARSLGLGDLDFSAVHEV 282 + + A + G G D SAV ++ Sbjct: 260 PLHLASTAYSMFTEASNAGYGKEDDSAVIKI 290
>YCY3_SHEFR (O33730) Hypothetical oxidoreductase in cytochrome c3 5'region| (Fragment) Length = 194 Score = 52.8 bits (125), Expect = 1e-06 Identities = 31/123 (25%), Positives = 58/123 (47%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 ++ GD+A +D + P LG +G G K+V + + ++ +EGL A Sbjct: 40 VMMGGDQAHFDTVKPVISAYSCAEL-LGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKS 98 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVS 372 +GL +++V+ G + + + +M QG Y+ F + +KD+ +AL N Sbjct: 99 AGLDGLKVIEVISKGRAQSWQMENRYKTMWQGQYDFGFAIDWMRKDLGIALDEARRNGSH 158 Query: 371 MPV 363 +PV Sbjct: 159 LPV 161
>YIHU_SHIFL (P0A9V9) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 52.4 bits (124), Expect = 1e-06 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%) Frame = -3 Query: 734 VILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLA 558 ++LA G + P +G + G G G ++KL+ N M +NA S E L Sbjct: 134 LLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLI-NNYMSIALNALSAEAAVLC 192 Query: 557 DKSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDEN 381 + L + V+ A F P+ +L G +PAF + KD+ +AL + ++ Sbjct: 193 EALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQL 252 Query: 380 AVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 V MP+ AR+ G G D+SA+ E ++ Sbjct: 253 HVPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287
>YIHU_ECOLI (P0A9V8) Hypothetical oxidoreductase yihU (EC 1.1.-.-)| Length = 298 Score = 52.4 bits (124), Expect = 1e-06 Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 2/155 (1%) Frame = -3 Query: 734 VILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFS-EGLCLA 558 ++LA G + P +G + G G G ++KL+ N M +NA S E L Sbjct: 134 LLLAGGTAEQVERATPILMAMGSELINAGGPGMGIRVKLI-NNYMSIALNALSAEAAVLC 192 Query: 557 DKSGLSPQTLLDVLDLGAIANPMFKMKGPS-MLQGSYNPAFPLKHQQKDMRLALSLGDEN 381 + L + V+ A F P+ +L G +PAF + KD+ +AL + ++ Sbjct: 193 EALNLPFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQL 252 Query: 380 AVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 V MP+ AR+ G G D+SA+ E ++ Sbjct: 253 HVPMPLGAASREVYSQARAAGRGRQDWSAILEQVR 287
>3HIDH_ARATH (Q9SUC0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 347 Score = 51.2 bits (121), Expect = 3e-06 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 12/158 (7%) Frame = -3 Query: 728 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 549 + G + Y P +G+ S + G GNG+ K+ N+ M M SE L L Sbjct: 184 MVGGPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSL 243 Query: 548 GLSPQTLLDVLDLGA-------IANPMFKMKGPSMLQG-----SYNPAFPLKHQQKDMRL 405 G+S TL +VL+ + NP+ P +++G YN F K KD+ L Sbjct: 244 GISASTLTEVLNTSSGRCWSSDAYNPV-----PGVMKGVPSSRDYNGGFASKLMAKDLNL 298 Query: 404 ALSLGDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAV 291 A + +E P+ G DFS V Sbjct: 299 AAASAEEVGHKSPLISKAQEIYKKMCEEGHETKDFSCV 336
>YGBJ_ECOLI (Q46888) Hypothetical oxidoreductase ygbJ (EC 1.1.-.-)| Length = 302 Score = 50.8 bits (120), Expect = 4e-06 Identities = 34/151 (22%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLG-EMGNGAKMKLVVNMIMGSMMNAFSEGLCLAD 555 ++A+G ++ + P + + K + +G E G G+ +K++ ++ G + A +E + LA Sbjct: 141 VMASGSDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAA 200 Query: 554 KSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAV 375 ++G+ + DV+ A + MF+ + ++ G Y P + KD+ L Sbjct: 201 RAGIPLDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHF 260 Query: 374 SMPVXXXXXXXXXXARSLGLGDLDFSAVHEV 282 +P+ A + G G D SAV ++ Sbjct: 261 PLPLASTALNMFTSASNAGYGKEDDSAVIKI 291
>MMSB_MYCTU (P63935) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 50.8 bits (120), Expect = 4e-06 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 8/159 (5%) Frame = -3 Query: 728 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 549 + GD++ P + + K G G G K+ NM++ A +E LA+K Sbjct: 133 MVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKL 192 Query: 548 GLSPQTLLDVLDLGAIAN-----PMFKMKGP---SMLQGSYNPAFPLKHQQKDMRLALSL 393 GLS Q+L DV+ GA N + GP S + P F KD+ LA+ Sbjct: 193 GLSAQSLFDVI-TGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDA 251 Query: 392 GDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 + P+ + DLDFSAV L+ Sbjct: 252 VAATGATAPLGSHAADIYAKF-AADHADLDFSAVIHTLR 289
>MMSB_MYCBO (P63936) Probable 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)| (HIBADH) Length = 294 Score = 50.8 bits (120), Expect = 4e-06 Identities = 43/159 (27%), Positives = 63/159 (39%), Gaps = 8/159 (5%) Frame = -3 Query: 728 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 549 + GD++ P + + K G G G K+ NM++ A +E LA+K Sbjct: 133 MVGGDESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKL 192 Query: 548 GLSPQTLLDVLDLGAIAN-----PMFKMKGP---SMLQGSYNPAFPLKHQQKDMRLALSL 393 GLS Q+L DV+ GA N + GP S + P F KD+ LA+ Sbjct: 193 GLSAQSLFDVI-TGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDA 251 Query: 392 GDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 + P+ + DLDFSAV L+ Sbjct: 252 VAATGATAPLGSHAADIYAKF-AADHADLDFSAVIHTLR 289
>3HIDH_DROME (Q9V8M5) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 324 Score = 50.8 bits (120), Expect = 4e-06 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 7/158 (4%) Frame = -3 Query: 728 LAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKS 549 + G +A Y+ + + +GKK G G G KL NM++ M SE + LA + Sbjct: 161 MVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQ 220 Query: 548 GLSPQTLLDVLD-------LGAIANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLG 390 GL ++++ I NP+ + + Y F KD+ LA + Sbjct: 221 GLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYAGGFSSALITKDLGLASGVA 280 Query: 389 DENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 + + +P+ GLG+ DFS V++++K Sbjct: 281 NASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMK 318
>MMSB_PSEAE (P28811) 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (HIBADH)| Length = 298 Score = 48.9 bits (115), Expect = 2e-05 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Frame = -3 Query: 689 PAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDL 510 P + +G+ F G+ G G K+ NM++G +M +E L L K+GL P L +V+ Sbjct: 149 PVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKNGLDPAVLSEVMKQ 208 Query: 509 GAIANPMFKMKGP-------SMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPV 363 + N + P + Y F ++ KD+ LAL+ S P+ Sbjct: 209 SSGGNWALNLYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANAQAVQASTPL 264
>3HIDH_RAT (P29266) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 40.8 bits (94), Expect = 0.004 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 7/140 (5%) Frame = -3 Query: 674 LGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA--- 504 +G + G +G+G K+ NM++ M +E + L +SGL P+ L +L++ + Sbjct: 191 MGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSGRC 250 Query: 503 ----IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXX 336 NP+ + +Y F KD+ LA + + Sbjct: 251 WSSDTYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSVAHQIYR 310 Query: 335 XARSLGLGDLDFSAVHEVLK 276 S G DFS+V + L+ Sbjct: 311 MMCSKGYSKKDFSSVFQYLR 330
>3HIDH_CAEEL (Q9XTI0) Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial| (EC 1.1.1.31) (HIBADH) Length = 299 Score = 40.4 bits (93), Expect = 0.006 Identities = 21/73 (28%), Positives = 37/73 (50%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 ++ AG+ A + ++GK LG +GNG K+ NM++G M A +E + L Sbjct: 136 MVGAGNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGIS 195 Query: 551 SGLSPQTLLDVLD 513 GL + L +++ Sbjct: 196 MGLDAKALAGIVN 208
>3HIDH_MOUSE (Q99L13) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 335 Score = 40.0 bits (92), Expect = 0.007 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 7/142 (4%) Frame = -3 Query: 680 DILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA- 504 + +G + G +G G K+ NM++ M +E + L +SGL P+ L +L++ + Sbjct: 189 ECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLDPKLLAKILNMSSG 248 Query: 503 ------IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXX 342 NP+ + +Y F KD+ LA + + Sbjct: 249 RCWSSDTYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQDSATSTKTPILLGSLAHQI 308 Query: 341 XXXARSLGLGDLDFSAVHEVLK 276 S G DFS+V + L+ Sbjct: 309 YRMMCSKGYSKKDFSSVFQYLR 330
>Y770_MYCTU (P71825) Hypothetical oxidoreductase Rv0770/MT0794 (EC 1.1.-.-)| Length = 295 Score = 36.6 bits (83), Expect = 0.083 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 14/137 (10%) Frame = -3 Query: 731 ILAAGDKALYDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADK 552 ++ D + + F GE G G +MKL NM+ A +E LA+ Sbjct: 140 VMVGADDEAFQRIKEPFSRWASLLIHAGEPGAGTRMKLARNMLTFVSYAAAAEAQRLAEA 199 Query: 551 SGLSPQTLLDVLDLGAIANPMFKMKGPS---MLQGSYNPAFP-------LKHQ----QKD 414 G LD++ LG + G + M + + P P L+H +KD Sbjct: 200 CG------LDLVALGKVVRHSDSFTGGAGAIMFRNTTAPMEPADPLRPLLEHTRGLGEKD 253 Query: 413 MRLALSLGDENAVSMPV 363 + LAL+LG+ +V +P+ Sbjct: 254 LSLALALGEVVSVDLPL 270
>3HIDH_HUMAN (P31937) 3-hydroxyisobutyrate dehydrogenase, mitochondrial| precursor (EC 1.1.1.31) (HIBADH) Length = 336 Score = 35.0 bits (79), Expect = 0.24 Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 7/140 (5%) Frame = -3 Query: 674 LGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLLDVLDLGA--- 504 +G + G +G G K+ NM++ M +E + L + GL P+ L +L++ + Sbjct: 192 MGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRC 251 Query: 503 ----IANPMFKMKGPSMLQGSYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXX 336 NP+ + +Y F KD+ LA + + Sbjct: 252 WSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATSTKSPILLGSLAHQIYR 311 Query: 335 XARSLGLGDLDFSAVHEVLK 276 + G DFS+V + L+ Sbjct: 312 MMCAKGYSKKDFSSVFQFLR 331
>GATB_ANASP (Q8YX22) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B| (EC 6.3.5.-) (Asp/Glu-ADT subunit B) Length = 491 Score = 32.3 bits (72), Expect = 1.6 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%) Frame = -3 Query: 704 YDDMVPAFDILGKKSFFLGEMGNGAKMKLVVNMIMGSMMNAFSEGLCLADKSGLSPQTLL 525 YD V D++ + F + + +GA K N I + ++ + GL+P L Sbjct: 332 YDTRVLTEDVIVSQYFEVA-IASGANPKAAANWITQDIAAYLNKQKLSITEIGLTPANLA 390 Query: 524 DV---LDLGAIANPMFKMKGPSMLQG 456 DV ++ G I+N K K P +L G Sbjct: 391 DVITRIETGKISNAQAKQKLPELLTG 416
>RP1_BOVIN (Q8MJ05) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1| protein homolog) Length = 2105 Score = 31.2 bits (69), Expect = 3.5 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +3 Query: 537 GAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLL------PKYVKCRDHV 698 G T S+G S T D + H+F C ++ LP+ E+ + K +K + HV Sbjct: 620 GTDKTISKTPASVGNSTVTTRIDQLIHEFSHCGLTKLPENEKQISSSVASKKKMKSQQHV 679 Query: 699 I 701 I Sbjct: 680 I 680
>YR765_MIMIV (Q5UPQ3) Putative BTB/POZ domain-containing protein R765| Length = 473 Score = 30.8 bits (68), Expect = 4.5 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%) Frame = -3 Query: 227 ITCHGHADILVVPPTHVAYHRTIDVYVHSNYW-LGHEGIC 111 I CH H ++++ V +R I++Y HSNY+ + + IC Sbjct: 271 IFCHNHKHVVIID---VESYRVINMYTHSNYFDVNIDNIC 307
>PANX1_HUMAN (Q96RD7) Pannexin-1| Length = 426 Score = 30.8 bits (68), Expect = 4.5 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +3 Query: 564 TESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDHVII*CLVAC 722 TE+LG+S+ S H + + L+ KY+ CR +I L+AC Sbjct: 176 TENLGQSLWEVSESHFKYPIVEQYLKTKKNSNNLIIKYISCRLLTLIIILLAC 228
>HBL1_CAEEL (Q9XYD3) Hunchback-like protein| Length = 982 Score = 30.4 bits (67), Expect = 5.9 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 559 AKQSPSEKAFIILPMIMLTTSFIFAPFPISPRKNDFFPS-MSNAGTMSSYSALSPAA 726 A SPS+ + P L +S I AP PI+P+ N+F S ++ A + A P+A Sbjct: 874 APHSPSDTTSV--PSPPLHSSSIVAPIPITPQPNEFLQSILAQASLLGPLLANRPSA 928
>CAPD_STAAU (P39853) Capsular polysaccharide biosynthesis protein capD| Length = 599 Score = 30.4 bits (67), Expect = 5.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 712 RHYMMTWSLHLTYLGRSRSFW 650 R Y +TW +HL +G SR FW Sbjct: 106 RLYFITWMMHLLLIGGSRLFW 126
>RPOB_STRT2 (Q5M2F5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1193 Score = 30.0 bits (66), Expect = 7.7 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 21/116 (18%) Frame = -3 Query: 701 DDMVPAF---DILGKKSFFLG------------EMGNG---AKMKLVVNMI---MGSMMN 585 DD V A DIL + S+FL +GN A +L+ N + M Sbjct: 374 DDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRVRAVGELLANQFRIGLARMER 433 Query: 584 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 417 E + + D L+PQ ++++ + A F S +NP L H+++ Sbjct: 434 NVRERMSVQDNEALTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRR 489
>RPOB_STRT1 (Q5LXV3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1193 Score = 30.0 bits (66), Expect = 7.7 Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 21/116 (18%) Frame = -3 Query: 701 DDMVPAF---DILGKKSFFLG------------EMGNG---AKMKLVVNMI---MGSMMN 585 DD V A DIL + S+FL +GN A +L+ N + M Sbjct: 374 DDKVRALTTADILAEMSYFLNLAEGIGKVDDIDHLGNRRVRAVGELLANQFRIGLARMER 433 Query: 584 AFSEGLCLADKSGLSPQTLLDVLDLGAIANPMFKMKGPSMLQGSYNPAFPLKHQQK 417 E + + D L+PQ ++++ + A F S +NP L H+++ Sbjct: 434 NVRERMSVQDNEALTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNPLSELSHKRR 489
>PIAS1_MOUSE (O88907) Protein inhibitor of activated STAT protein 1 (DEAD/H| box-binding protein 1) Length = 651 Score = 30.0 bits (66), Expect = 7.7 Identities = 18/48 (37%), Positives = 23/48 (47%) Frame = +3 Query: 12 LXPTKKRPQNGIARWT*PEQRSPVSRTPKDPNPTDTFMPKPIIRMYVH 155 L PT GI P Q SPVSRTP P +++ +I+ Y H Sbjct: 484 LSPTSPLSNKGILSL--PHQASPVSRTPSLPAVDTSYINTSLIQDYRH 529
>JSN1_YEAST (P47135) Protein JSN1 (Protein PUF1)| Length = 1091 Score = 30.0 bits (66), Expect = 7.7 Identities = 15/60 (25%), Positives = 29/60 (48%) Frame = -3 Query: 455 SYNPAFPLKHQQKDMRLALSLGDENAVSMPVXXXXXXXXXXARSLGLGDLDFSAVHEVLK 276 S + FPL+HQQ + A++L + ++ R+L + ++FS+V +K Sbjct: 343 SISNVFPLQHQQPQLNNAINLTSTSLATLCSKYGEVISARTLRNLNMALVEFSSVESAVK 402
>PANX1_MOUSE (Q9JIP4) Pannexin-1| Length = 426 Score = 30.0 bits (66), Expect = 7.7 Identities = 19/69 (27%), Positives = 31/69 (44%) Frame = +3 Query: 516 QDIKKRLGAQPTFVSQTESLGESIHHTSHDHVDHQFHLCSISHLPQKERLLPKYVKCRDH 695 +D+ R G P V TE++G+S+ S H + + L+ KY+ CR Sbjct: 161 RDLDLRDGPGPPGV--TENVGQSLWEISESHFKYPIVEQYLKTKKNSSHLIMKYISCRLV 218 Query: 696 VII*CLVAC 722 + L+AC Sbjct: 219 TFVVILLAC 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 113,695,200 Number of Sequences: 219361 Number of extensions: 2523922 Number of successful extensions: 6642 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 6273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6628 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7649585595 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
