>LIVF_SALTY (P0A191) High-affinity branched-chain amino acid transport|
           ATP-binding protein livF (LIV-I protein F)
          Length = 237

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
 Frame = +3

Query: 120 GKRIWGDNTKQKGTTVGWLLPQKDRPGAETRWVYTFALQLHASR-QGTGLGSRKHQERPR 296
           G+R++   T ++   +G    ++DR     +WVY    +LH  R Q  G  S   Q+   
Sbjct: 88  GRRVFSRMTVEENLAMGGFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLA 147

Query: 297 TGLSIMT------IKEPSSG 338
            G ++M+      + EPS G
Sbjct: 148 IGRALMSQPRLLLLDEPSLG 167

>LIVF_SALTI (P0A192) High-affinity branched-chain amino acid transport|
           ATP-binding protein livF (LIV-I protein F)
          Length = 237

 Score = 33.1 bits (74), Expect = 0.83
 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
 Frame = +3

Query: 120 GKRIWGDNTKQKGTTVGWLLPQKDRPGAETRWVYTFALQLHASR-QGTGLGSRKHQERPR 296
           G+R++   T ++   +G    ++DR     +WVY    +LH  R Q  G  S   Q+   
Sbjct: 88  GRRVFSRMTVEENLAMGGFFAERDRFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLA 147

Query: 297 TGLSIMT------IKEPSSG 338
            G ++M+      + EPS G
Sbjct: 148 IGRALMSQPRLLLLDEPSLG 167

>BRCC3_HUMAN (P46736) BRCA1/BRCA2-containing complex subunit 3|
          Length = 316

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 694 EEQSAYNQAMLQNICDGKMHPLTSMHHTSTYNASLCKLMEYCLSPAIGVLQDRVKENE 521
           EEQ AY +       D     +T +H+ S +  +LC  M     P +  L+DR+++N+
Sbjct: 242 EEQDAYRRIHSLTHLDS----VTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQ 295

>BRCC3_MOUSE (P46737) BRCA1/BRCA2-containing complex subunit 3|
          Length = 291

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -2

Query: 694 EEQSAYNQAMLQNICDGKMHPLTSMHHTSTYNASLCKLMEYCLSPAIGVLQDRVKENE 521
           EEQ AY +       D     +T +H+ S +  +LC  M     P +  L+DR+++N+
Sbjct: 217 EEQDAYRRIHSLTHLDS----VTKIHNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNQ 270

>LIVF_ECOLI (P22731) High-affinity branched-chain amino acid transport|
           ATP-binding protein livF (LIV-I protein F)
          Length = 237

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
 Frame = +3

Query: 120 GKRIWGDNTKQKGTTVGWLLPQKDRPGAETRWVYTFALQLHASR-QGTGLGSRKHQERPR 296
           G+R++   T ++   +G    ++D+     +WVY    +LH  R Q  G  S   Q+   
Sbjct: 88  GRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQRAGTMSGGEQQMLA 147

Query: 297 TGLSIMT------IKEPSSG 338
            G ++M+      + EPS G
Sbjct: 148 IGRALMSNPRLLLLDEPSLG 167

>O1052_MOUSE (Q8VGR8) Olfactory receptor 1052 (Olfactory receptor 172-1)|
          Length = 312

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 226 NVYTHLVSAPGLSFCGSNQPTVVPFCFVLSPQILLPGCAELVM 98
           N  TH +S   LSFCG   P +V   F   P +L+  C++  M
Sbjct: 155 NSLTHTISLSKLSFCG---PNIVGHFFCDIPSLLILSCSDTSM 194

>GLGB2_XANAC (Q8PQA2) 1,4-alpha-glucan branching enzyme 2 (EC 2.4.1.18)|
           (Glycogen branching enzyme 2) (BE 2)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase 2)
          Length = 719

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +1

Query: 193 GQALKRD-GYIHLHCSFMPHAKGQVWVPESIR 285
           GQAL+R  G  HLHC  +P  +  +W P + R
Sbjct: 110 GQALRRALGAQHLHCGDVPGVRFALWAPHAQR 141


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,888,548
Number of Sequences: 219361
Number of extensions: 2077526
Number of successful extensions: 4735
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4735
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6912958834
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)