ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd15d20 |
|---|---|
| Clone Library Name | barley_pub |
>DDR48_YEAST (P18899) Stress protein DDR48 (DNA damage-responsive protein 48)| (DDRP 48) (YP 75) (Flocculent-specific protein) Length = 429 Score = 42.7 bits (99), Expect = 0.001 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 2/98 (2%) Frame = -2 Query: 610 SNDTFG--RFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQGGS 437 +ND++G DS+ SN D GSS + S SN D G++N+ Y S+N D GS Sbjct: 99 NNDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYG--SNNNDSYGS 156 Query: 436 NNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHD 323 NNN +++ ++S+ + D +++ D Sbjct: 157 NNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDD 194 Score = 38.1 bits (87), Expect = 0.022 Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 8/118 (6%) Frame = -2 Query: 613 GSN--DTFG--RFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQ 446 GSN D++G DS+ SN D GSS + S SN D G++N+ DS SN D Sbjct: 215 GSNNDDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNN---NDSYGSNNDD 271 Query: 445 --GGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKST--DSHDRGYSFXXXDPFGT 284 G SN N S + +++ + KS+ ++D Y D +G+ Sbjct: 272 SYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNNDDSYGSNNDDSYGS 329 Score = 37.7 bits (86), Expect = 0.029 Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = -2 Query: 610 SNDTFG--RFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQGGS 437 +ND++G DS+ SN D GSS S SN D G+NN S + G S Sbjct: 150 NNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSS 209 Query: 436 NNN 428 NN+ Sbjct: 210 NND 212 Score = 36.6 bits (83), Expect = 0.065 Identities = 32/91 (35%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Frame = -2 Query: 637 FGSS----AELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYD 470 +GSS + G SN+ DS+ SN D GSS + S SN D G++N+ D Sbjct: 327 YGSSNKKKSSYGSSNN-----DSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNN---ND 378 Query: 469 SMSSNADQ--GGSNNNXXXXXXXXXXXSNAD 383 S SN D G SN N SN D Sbjct: 379 SYGSNNDDSYGSSNRNKNSYGSSNYGSSNND 409 Score = 36.2 bits (82), Expect = 0.085 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 1/119 (0%) Frame = -2 Query: 637 FGSSAELGGSNDTFGRFDSF-RSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMS 461 +GSS + S + DS+ SN D GSS + S SN D G+NN Y S + Sbjct: 273 YGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNNDDSYGSNNDDS-YGSSN 331 Query: 460 SNADQGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYSFXXXDPFGT 284 GS+NN +++ +S+ + D + +++ Y D +G+ Sbjct: 332 KKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGS 390 Score = 34.7 bits (78), Expect = 0.25 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 7/117 (5%) Frame = -2 Query: 613 GSN--DTFG----RFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNA 452 GSN D++G + S+ SN D GSS S+N D G +N + Y S S++ Sbjct: 231 GSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDD 290 Query: 451 DQGGSNN-NXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYSFXXXDPFGT 284 G SNN + +++D S DS S++ Y D +G+ Sbjct: 291 SYGSSNNDDSYGSSNKKKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGS 347 Score = 34.7 bits (78), Expect = 0.25 Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 6/76 (7%) Frame = -2 Query: 637 FGSS----AELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSM-SSNADQGGGNNNSFMRY 473 +GSS + G +ND DS+ SN D GSS + S SSN D G NN+ Sbjct: 170 YGSSNKNKSSYGSNND-----DSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNND----- 219 Query: 472 DSM-SSNADQGGSNNN 428 DS S+N D GSNN+ Sbjct: 220 DSYGSNNNDSYGSNND 235 Score = 33.5 bits (75), Expect = 0.55 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 3/106 (2%) Frame = -2 Query: 592 RFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSF--MRYDSM-SSNADQGGSNNNXX 422 RFD S Q ++ + + ++N G NN+S+ DS S+N D GSNNN Sbjct: 51 RFDKMESKVRQQFSNTSINDNDSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNNDS 110 Query: 421 XXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYSFXXXDPFGT 284 +++ +S+ + D + +++ Y D +G+ Sbjct: 111 YGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGS 156 Score = 33.1 bits (74), Expect = 0.72 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 15/119 (12%) Frame = -2 Query: 637 FGSS----AELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSM---------SSNADQGGG 497 +GSS + G +ND DS+ SN D GSS + S S+N D G Sbjct: 301 YGSSNKKKSSYGSNND-----DSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGS 355 Query: 496 NNNSFMRYDSMSSNADQGGSNNNXXXXXXXXXXXSNADHDRSNTF--ARFDSMKSTDSH 326 +N Y S+N D GS+NN + + N++ + + S + DS+ Sbjct: 356 SNKKKSSYG--SNNDDSYGSSNNNDSYGSNNDDSYGSSNRNKNSYGSSNYGSSNNDDSY 412 Score = 33.1 bits (74), Expect = 0.72 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 2/111 (1%) Frame = -2 Query: 610 SNDTFG--RFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQGGS 437 +ND++G DS+ SN + GS+ DS SN + G+NN Y S + GS Sbjct: 75 NNDSYGSNNNDSYGSNNNDSYGSN--NNDSYGSNNNDSYGSNND-DSYGSSNKKKSSYGS 131 Query: 436 NNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYSFXXXDPFGT 284 NN+ ++++ S DS S + G S +G+ Sbjct: 132 NNDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGS 182 Score = 32.0 bits (71), Expect = 1.6 Identities = 32/117 (27%), Positives = 50/117 (42%), Gaps = 7/117 (5%) Frame = -2 Query: 613 GSN--DTFGRF---DSFRSNADQGGGSSFMRYDSM-SSNADQGGGNNNSFMRYDSMSSNA 452 GSN D++G DS+ SN D GSS S SS+ D G++N+ Y S + Sbjct: 249 GSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKK 308 Query: 451 DQGGSNNNXXXXXXXXXXXSNADHDRSN-TFARFDSMKSTDSHDRGYSFXXXDPFGT 284 GSNN+ +++ +S+ + DS S + G S +G+ Sbjct: 309 SSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGS 365
>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) (Omnipotent suppressor protein 2) Length = 741 Score = 38.1 bits (87), Expect = 0.022 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = -2 Query: 616 GGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNS----FMRYDSMSSNAD 449 G FG++ + N +QGG + Y++ ++ GG NNS + Y+S ++N++ Sbjct: 55 GQQEQQFGQYGQQQQNYNQGG---YNNYNNRGGYSNNRGGYNNSNRGGYSNYNSYNTNSN 111 Query: 448 QGGSNN 431 QGG +N Sbjct: 112 QGGYSN 117 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 7/70 (10%) Frame = -2 Query: 616 GGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGN-------NNSFMRYDSMSS 458 GG ++ G ++ N+++GG S+ Y+S ++N++QGG + NNS+ ++ ++ Sbjct: 83 GGYSNNRGGYN----NSNRGGYSN---YNSYNTNSNQGGYSNYNNNYANNSYNNNNNYNN 135 Query: 457 NADQGGSNNN 428 N +QG +N N Sbjct: 136 NYNQGYNNYN 145 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 7/70 (10%) Frame = -2 Query: 634 GSSAELGGSNDT----FGRFDSFRSNADQGGGSSF---MRYDSMSSNADQGGGNNNSFMR 476 G S GG N++ + ++S+ +N++QGG S++ +S ++N + N + Sbjct: 84 GYSNNRGGYNNSNRGGYSNYNSYNTNSNQGGYSNYNNNYANNSYNNNNNYNNNYNQGYNN 143 Query: 475 YDSMSSNADQ 446 Y+S DQ Sbjct: 144 YNSQPQGQDQ 153
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 35.8 bits (81), Expect = 0.11 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 1/108 (0%) Frame = -2 Query: 631 SSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNA 452 SS SN + S SN+ SS + SSN+ ++NS S SSN+ Sbjct: 855 SSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNS 914 Query: 451 DQGGSNNNXXXXXXXXXXXSNAD-HDRSNTFARFDSMKSTDSHDRGYS 311 ++N N++ D SN+ DS S++S D S Sbjct: 915 SDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNS 962 Score = 35.4 bits (80), Expect = 0.14 Identities = 29/107 (27%), Positives = 48/107 (44%) Frame = -2 Query: 631 SSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNA 452 +S++ S+D+ DS S++ SS S SSN+ +++S DS SSN Sbjct: 799 NSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDSSDSDSSN- 857 Query: 451 DQGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYS 311 + S+N+ S+ D S++ +S S+DS D S Sbjct: 858 -RSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSNESSNSSDSSDSSNS 903 Score = 34.3 bits (77), Expect = 0.32 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 9/113 (7%) Frame = -2 Query: 634 GSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSN 455 G+ ++ G+ D S +N+D G + D+ S D G G ++S S SSN Sbjct: 502 GNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKS--DSGKGKSDSSDSDSSDSSN 559 Query: 454 ---------ADQGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHD 323 +D SN++ ++D D S++ DS S+DS D Sbjct: 560 SSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSD 612 Score = 30.8 bits (68), Expect = 3.6 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%) Frame = -2 Query: 631 SSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNA-------DQGGGNNNSFMRY 473 SS S+D+ + DS SN+ +S S SSN+ D +++S Sbjct: 626 SSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSS 685 Query: 472 DSMSSNADQGGSNNNXXXXXXXXXXXSNADHDRSNT-------FARFDSMKSTDSHD 323 S SSN+ +++ ++D D S++ + DS S+DS D Sbjct: 686 SSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSD 742
>K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)| (Keratin-10) (K10) (56 kDa cytokeratin) (Keratin, type I cytoskeletal 59 kDa) Length = 569 Score = 35.8 bits (81), Expect = 0.11 Identities = 23/66 (34%), Positives = 28/66 (42%) Frame = -2 Query: 634 GSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSN 455 G GGS+ G + S GGSS Y SS+ GG +S Y SS+ Sbjct: 486 GGGGSYGGSSGGGGSYGGGSSGGGSHGGSSGGGYGGGSSSGGAGGHGGSSGGGYGGGSSS 545 Query: 454 ADQGGS 437 QGGS Sbjct: 546 GGQGGS 551
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 35.4 bits (80), Expect = 0.14 Identities = 22/70 (31%), Positives = 29/70 (41%) Frame = -2 Query: 637 FGSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSS 458 + GG ++G+ S+ N QG G +Y+S S GGG N SMSS Sbjct: 130 YSQQPSYGGQQQSYGQQQSY--NPPQGYGQQ-NQYNSSSGGGGGGGGGGNYGQDQSSMSS 186 Query: 457 NADQGGSNNN 428 GG N Sbjct: 187 GGGSGGGYGN 196
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 34.7 bits (78), Expect = 0.25 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = -2 Query: 634 GSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSF 482 G SA GG N+ GR FR+N D+GG R N GGN F Sbjct: 33 GDSAPRGGFNNGGGRGGFFRNNGDRGGFGFGGRGGGFGGNRGGFGGNRGGF 83
>RTOA_DICDI (P54681) Protein rtoA (Ratio-A)| Length = 400 Score = 34.3 bits (77), Expect = 0.32 Identities = 25/105 (23%), Positives = 44/105 (41%) Frame = -2 Query: 631 SSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNA 452 +S+E S+ + S ++ + GSS S S++ + G++NS + + SSN+ Sbjct: 82 ASSEGSVSSSSNSGSQSTSNSGSEASGSSNSGSQSTSNSGSEASGSSNSGSQSSTDSSNS 141 Query: 451 DQGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRG 317 GS + SN+ S + S ST S + G Sbjct: 142 GSQGSTGSSNSGSQSSTDSSNSGSQSSTDSSNSGSQGSTGSSNSG 186
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 33.5 bits (75), Expect = 0.55 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 9/62 (14%) Frame = -2 Query: 613 GSNDTFGRFDSFRSNADQGG-------GSSFMRYDSMSSNADQ--GGGNNNSFMRYDSMS 461 G ND FGR +F GG G S Y+ ++ GGG+ N F Y++ S Sbjct: 210 GGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQS 269 Query: 460 SN 455 SN Sbjct: 270 SN 271
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 33.5 bits (75), Expect = 0.55 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 9/62 (14%) Frame = -2 Query: 613 GSNDTFGRFDSFRSNADQGG-------GSSFMRYDSMSSNADQ--GGGNNNSFMRYDSMS 461 G ND FGR +F GG G S Y+ ++ GGG+ N F Y++ S Sbjct: 210 GGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQS 269 Query: 460 SN 455 SN Sbjct: 270 SN 271
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 33.5 bits (75), Expect = 0.55 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 9/62 (14%) Frame = -2 Query: 613 GSNDTFGRFDSFRSNADQGG-------GSSFMRYDSMSSNADQ--GGGNNNSFMRYDSMS 461 G ND FGR +F GG G S Y+ ++ GGG+ N F Y++ S Sbjct: 210 GGNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGNYNNQS 269 Query: 460 SN 455 SN Sbjct: 270 SN 271
>K2CB_BOVIN (P04262) Keratin, type II cytoskeletal 68 kDa, component IB| (Fragment) Length = 166 Score = 32.3 bits (72), Expect = 1.2 Identities = 23/66 (34%), Positives = 29/66 (43%) Frame = -2 Query: 634 GSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSN 455 GSS GGS FG F ++ GGGSS S + GGG +SS Sbjct: 99 GSSGFGGGSGSGFGGGSGFSGSSGFGGGSSGFGSGSGGRSGVSGGG----------LSSG 148 Query: 454 ADQGGS 437 + +GGS Sbjct: 149 SSRGGS 154
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/61 (32%), Positives = 32/61 (52%) Frame = -2 Query: 613 GSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQGGSN 434 G++ G +S +++ GG+S Y + +SN GG NNN + S S +Q GSN Sbjct: 611 GNSGNSGWGNSGNASSSGWGGNSSSSYSNTNSNYG-GGYNNNQRSNFSSGGSYGNQTGSN 669 Query: 433 N 431 + Sbjct: 670 S 670
>SEPT3_MOUSE (Q9Z1S5) Neuronal-specific septin-3| Length = 465 Score = 32.3 bits (72), Expect = 1.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -1 Query: 209 LLTGTCII*RSCCVCLCTLLHIYIHVQGRARHFCLGGEGACLCVC 75 +L+ C+ CVC+C +++ + V A + E AC+CVC Sbjct: 368 ILSSVCV-----CVCVCVCMYVCMCVMESACVYVCVMESACVCVC 407
>NUPL_BOVIN (Q2TA45) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 562 Score = 32.0 bits (71), Expect = 1.6 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 10/153 (6%) Frame = -2 Query: 637 FGSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQ-------GGGNNNSFM 479 F S A +N F FD+F G S+F + + S ++ Q G N +F Sbjct: 227 FNSHAAQNSANADFANFDAF---GQSSGSSNFGGFPTASHSSFQPQTTGGSAGSVNANFA 283 Query: 478 RYDSM--SSNADQGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDS-HDRGYSF 308 +D+ SS+AD G N + +A+ T ++ ++ + D+ G Sbjct: 284 HFDNFPKSSSADFGTFNTSQSHQTASAVSKVSANKAGLQTTDKYAALANLDNIFSAGQGG 343 Query: 307 XXXDPFGTGXXXXXXXXXXXXXXTRHGTDKWSA 209 FGT + +DK++A Sbjct: 344 DQGSGFGTTGKAPVGSVVSVPSQSSASSDKYAA 376
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 31.6 bits (70), Expect = 2.1 Identities = 22/70 (31%), Positives = 27/70 (38%) Frame = -2 Query: 637 FGSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSS 458 +G GG G + +QGGG YD+ GGGN N F Y+ SS Sbjct: 244 YGGGPSYGGGRG--GGYGGGAGYGNQGGGYGG-GYDNYGGGNYGGGGNYNDFGNYNQQSS 300 Query: 457 NADQGGSNNN 428 N S N Sbjct: 301 NYGPMKSGGN 310
>RO31_XENLA (P51968) Heterogeneous nuclear ribonucleoprotein A3 homolog 1| (hnRNP A3(A)) Length = 373 Score = 31.6 bits (70), Expect = 2.1 Identities = 18/63 (28%), Positives = 23/63 (36%) Frame = -2 Query: 616 GGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQGGS 437 GG D + F N G G Y +QGGG YD + + + GG Sbjct: 256 GGGGDGYNGFGGDGGNYGGGPGYGGRGYGGSPGYGNQGGGYGGGGGGYDGYNESGNFGGG 315 Query: 436 NNN 428 N N Sbjct: 316 NYN 318
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 31.2 bits (69), Expect = 2.7 Identities = 23/69 (33%), Positives = 29/69 (42%) Frame = -2 Query: 634 GSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSN 455 G S GG +G S+ +QGGG YD+ GGGN N F Y+ SS+ Sbjct: 258 GPSYGAGGGRGGYGGGPSY---GNQGGGYGG-GYDNYGGGNYGGGGNYNDFGNYNQQSSS 313 Query: 454 ADQGGSNNN 428 S N Sbjct: 314 YGPMKSGGN 322
>SER1_GALME (O96614) Sericin-1 (Silk gum protein 1) (Fragment)| Length = 115 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -2 Query: 634 GSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSN 455 GSS G S + S S + GSS S SS + +N S S S+ Sbjct: 43 GSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSGSSSSSSSNGSGSSSGSSQSS 102 Query: 454 ADQGGSNN 431 QGGS++ Sbjct: 103 GSQGGSSS 110
>DSPP_RAT (Q62598) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 687 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/106 (23%), Positives = 44/106 (41%) Frame = -2 Query: 628 SAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNAD 449 S++ S+DT DS ++ G S DS SSN+ +++S DS SS++ Sbjct: 585 SSDSSNSSDTSDSSDSSDGDSSDGDSSDSDSSDSDSSNSSDSDSSDSS----DSSSSDSS 640 Query: 448 QGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYS 311 S++ N+ N+ + DS ++ D +S Sbjct: 641 DSDSDSK---DSTSDSSDDNSKSGNGNSDSDSDSDSDSEGSDSNHS 683
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 30.4 bits (67), Expect = 4.6 Identities = 22/69 (31%), Positives = 31/69 (44%) Frame = -2 Query: 637 FGSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSS 458 +G + GG ++G+ S+ N QG G +Y+S S GGG + SMSS Sbjct: 130 YGQQSGYGGQQQSYGQQQSY--NPPQGYGQQ-SQYNS--SGGGGGGGGGSYGQDQPSMSS 184 Query: 457 NADQGGSNN 431 GG N Sbjct: 185 GGGGGGYGN 193
>LAC1_TRAHI (Q02497) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) (Ligninolytic phenoloxidase) Length = 520 Score = 30.4 bits (67), Expect = 4.6 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -2 Query: 583 SFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYD 470 SF NADQ G+ ++R + N GG N++ +RYD Sbjct: 266 SFVLNADQDVGNYWIRANPNFGNVGFAGGINSAILRYD 303
>ROA2_HUMAN (P22626) Heterogeneous nuclear ribonucleoproteins A2/B1 (hnRNP A2 /| hnRNP B1) Length = 353 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 6/75 (8%) Frame = -2 Query: 637 FGSSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSS 458 FG S GG +G N G G + Y + G GN N F Y+ S Sbjct: 256 FGGSPGYGGGRGGYGGGGPGYGNQGGGYGGGYDNY----GGGNYGSGNYNDFGNYNQQPS 311 Query: 457 N------ADQGGSNN 431 N + GGS N Sbjct: 312 NYGPMKSGNFGGSRN 326
>HYR1_CANAL (P46591) Hyphally-regulated protein precursor| Length = 937 Score = 30.0 bits (66), Expect = 6.1 Identities = 26/113 (23%), Positives = 41/113 (36%) Frame = -2 Query: 631 SSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNA 452 ++ GG N T G SN G GS+ S N G N S ++ S + Sbjct: 572 TTTSTGGDNSTGGNESG--SNHGPGNGST-----EGSGNGSGAGSNEGSQSGPNNGSGSG 624 Query: 451 DQGGSNNNXXXXXXXXXXXSNADHDRSNTFARFDSMKSTDSHDRGYSFXXXDP 293 +GGSNN + ++ S + + S + S++ S P Sbjct: 625 SEGGSNNGSGSDSGSNNGSGSGSNNGSGSGSTEGSEGGSGSNEGSQSGSGSQP 677
>SER2_GALME (O96615) Sericin-2 (Silk gum protein 2) (Fragment)| Length = 220 Score = 30.0 bits (66), Expect = 6.1 Identities = 22/68 (32%), Positives = 28/68 (41%) Frame = -2 Query: 631 SSAELGGSNDTFGRFDSFRSNADQGGGSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNA 452 S+ GS+ T S +N G S+ S SSN G NNS S S+N+ Sbjct: 3 STNNSSGSSSTNNSSGSSSTNNSSGSSSTNNASGSSSSNNTSGSSRNNS--SGSSSSNNS 60 Query: 451 DQGGSNNN 428 G S N Sbjct: 61 SSGSSAGN 68
>RNA15_YEAST (P25299) mRNA 3'-end-processing protein RNA15| Length = 296 Score = 29.6 bits (65), Expect = 7.9 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -2 Query: 553 GSSFMRYDSMSSNADQGGGNNNSFMRYDSMSSNADQGGSNNN 428 GS F++ SSN+D G + +Y++++ N + G+NNN Sbjct: 85 GSRFLKC-GYSSNSDISGVSQQQQQQYNNINGNNNNNGNNNN 125 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,606,897 Number of Sequences: 219361 Number of extensions: 1299496 Number of successful extensions: 4349 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3516 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4035 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5995743495 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
