>SCYBG_MOUSE (Q8BSU2) Small inducible cytokine B16 precursor (Transmembrane|
           chemokine CXCL16) (SR-PSOX) (Scavenger receptor for
           phosphatidylserine and oxidized low density lipoprotein)
          Length = 246

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = +1

Query: 292 PTPTIVHVRSILDLTN-CPSYLLYLFDSPSFCLSRVFQWHVSVLFPIT*KK*ATGSGTRY 468
           P  T+ H+R  L   + CP ++ +   S S C     QW   ++     K+  TG G  +
Sbjct: 48  PQGTLDHIRKYLKAFHRCPFFIRFQLQSKSVCGGSQDQWVRELVDCFERKECGTGHGKSF 107

Query: 469 YHYR 480
           +H +
Sbjct: 108 HHQK 111

>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular|
           protein of testis) (Proliferation potential-related
           protein) (Protein P2P-R)
          Length = 1790

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -3

Query: 192 RNVAKGRKIHGPTPLSPPRRNYEITPRTPSASRGHGPT 79
           R+ ++    H     SPP R Y    R+P A RG  PT
Sbjct: 746 RSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSPT 783

>RLUE_XANCP (Q8PDR2) Ribosomal large subunit pseudouridine synthase E (EC|
           5.4.99.-) (rRNA-uridine isomerase E) (rRNA
           pseudouridylate synthase E)
          Length = 187

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 422 SPLLRKSEPPVQVQDTIITAWTIRQPTRNRNDPIAR 529
           +P L   +PPV+V+ T+  AW   Q T  RN  + R
Sbjct: 110 APTLWPRDPPVRVRKTVPDAWLEVQITEGRNRQVRR 145

>RLUE_XANAC (Q8PQN3) Ribosomal large subunit pseudouridine synthase E (EC|
           5.4.99.-) (rRNA-uridine isomerase E) (rRNA
           pseudouridylate synthase E)
          Length = 190

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 422 SPLLRKSEPPVQVQDTIITAWTIRQPTRNRNDPIAR 529
           +P L   +PPV+V+ T+  AW   Q T  RN  + R
Sbjct: 110 APQLWPRDPPVRVRKTVPDAWLELQITEGRNRQVRR 145

>FLNC_MOUSE (Q8VHX6) Filamin-C (Gamma-filamin) (Filamin-2) (FLN-C)|
           (Actin-binding-like protein) (ABP-L) (ABP-280-like
           protein) (Fragment)
          Length = 1144

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
 Frame = -1

Query: 251 EDQVGPCE*LDA-LSPFNPLSEM*QKEGKSMDRPHCLHPVGTTRSPQGRLRRPGVTDRP* 75
           E+ V P E L++ L PFN +     ++G+           G  R P G+  RP +TD   
Sbjct: 188 EEPVVPVEPLESMLRPFNLVIPFTVQKGEL---------TGEVRMPSGKTARPNITD--- 235

Query: 74  TLFNKWNTLAVRSPVGSKG 18
              NK  T+ VR     KG
Sbjct: 236 ---NKDGTITVRYAPTEKG 251

>Y4142_BRAJA (Q89MQ0) UPF0061 protein bll4142|
          Length = 491

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
 Frame = -1

Query: 311 WTIVG-VGGSPRLPSSGIPGEEDQVGPCE*LDALSP---FNPLSEM 186
           W +VG + G     +S I GE    GPC  +DA +P   F+ + EM
Sbjct: 237 WLLVGFIHGVMNTDNSSISGETIDYGPCAFMDAYNPAQVFSSIDEM 282


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,435,367
Number of Sequences: 219361
Number of extensions: 2608951
Number of successful extensions: 6941
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6941
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)