| Clone Name | rbasd14k03 |
|---|---|
| Clone Library Name | barley_pub |
>J1L_HCMVA (P17143) Hypothetical protein J1L| Length = 309 Score = 32.7 bits (73), Expect = 0.85 Identities = 30/103 (29%), Positives = 36/103 (34%), Gaps = 5/103 (4%) Frame = -3 Query: 400 TEEEPPSHLYIPRHSMRRLHWIWAYRPCEADDTWFASSHDNTAPRRDLGP*VRPSPACRR 221 T P PRH R R D ++ T R P RP CR+ Sbjct: 39 TPSRTPPVSATPRHRRR------PERSKTPDKRSAETTQARTVERTGSAPKHRPEARCRQ 92 Query: 220 SASPWE----HCFISWSPPTLFVTNESGK-HNAHPQASCFGCV 107 PW+ C S TL N + H+A P CFGCV Sbjct: 93 QI-PWDDTHRQCAGSVGHNTLTALNTPSRTHHAAPHRRCFGCV 134
>KR103_HUMAN (P60369) Keratin-associated protein 10-3 (Keratin-associated| protein 10.3) (High sulfur keratin-associated protein 10.3) (Keratin-associated protein 18-3) (Keratin-associated protein 18.3) Length = 221 Score = 31.2 bits (69), Expect = 2.5 Identities = 16/46 (34%), Positives = 19/46 (41%) Frame = +1 Query: 295 QTMCHPPHKACRPKSNEAAACCALVCTGG*VAPLRCS*GACCDFWC 432 ++ C PP C P A C LVCT P+ C CC C Sbjct: 24 ESCCEPP--CCAPSCCAPAPCLTLVCT-----PVSCVSSPCCQAAC 62
>Y1679_GLUOX (Q5FQC7) UPF0082 protein GOX1679| Length = 249 Score = 30.8 bits (68), Expect = 3.2 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -1 Query: 525 LYDTQSVALLFL-IGVVSVTPALLSKDEAQEKAPEIAAGAS*TPKRSHLATCTYQ 364 L +T SV+ +F +GV+S + S+DE E A E A + T + H TC + Sbjct: 124 LGETNSVSFMFQRLGVISYPLDVASEDEMLEAAIEAGADNAETTEEGHEVTCAME 178
>ATP4A_XENLA (Q92126) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1030 Score = 30.0 bits (66), Expect = 5.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN +KPP P Y++ AR L G+ Sbjct: 82 GPNELKPPKGTPEYIKFARQLAGGL 106
>ATP4A_PIG (P19156) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN ++PP P YV+ AR L G+ Sbjct: 85 GPNALRPPRGTPEYVKFARQLAGGL 109
>ATP4A_CANFA (P50996) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN ++PP P YV+ AR L G+ Sbjct: 85 GPNALRPPRGTPEYVKFARQLAGGL 109
>ATP4A_RABIT (P27112) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1034 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN ++PP P YV+ AR L G+ Sbjct: 86 GPNALRPPRGTPEYVKFARQLAGGL 110
>ATP4A_HUMAN (P20648) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1034 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN ++PP P YV+ AR L G+ Sbjct: 86 GPNALRPPRGTPEYVKFARQLAGGL 110
>SELU_BORBR (Q7WE96) tRNA 2-selenouridine synthase (EC 2.9.1.-)| (Selenophosphate-dependent tRNA 2-selenouridine synthase) Length = 368 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/51 (27%), Positives = 23/51 (45%) Frame = -1 Query: 384 LATCTYQGTACGGFIGFGPTGLVRRMTHGLLVHMTTQHHGGTLDPESAHHP 232 +A C + GG G G T ++R++ HGL + H G + + P Sbjct: 139 IAECGF--VVLGGMTGTGKTDVLRQLDHGLDLEAHAHHRGSSFGKHATGQP 187
>GMIP_HUMAN (Q9P107) GEM-interacting protein (GMIP)| Length = 970 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = -3 Query: 529 RPVRHPVSSSAVLDRRRLGHTSIAEQGRGSRKGTRNRSRRLMNTEEEPPSHLYIPRH 359 RPV H +SS A++ + T I RGS +G R S + E P +P+H Sbjct: 878 RPVTHQLSSLALVASKLCEETPITSVPRGSLRG-RGPSPAAASPEGSPLRRTPLPKH 933
>ATP4A_RAT (P09626) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1032 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN ++PP P YV+ AR L G+ Sbjct: 84 GPNALRPPRGTPEYVKFARQLAGGL 108
>ATP4A_MOUSE (Q64436) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1032 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +2 Query: 329 GPNPMKPPHAVPWYVQVARWLLFGV 403 GPN ++PP P YV+ AR L G+ Sbjct: 84 GPNALRPPRGTPEYVKFARQLAGGL 108 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 97,365,183 Number of Sequences: 219361 Number of extensions: 2250975 Number of successful extensions: 6335 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6318 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)