ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14j15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete... 456 e-125
2dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
3dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 2e-22
4gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 111 3e-21
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 111 3e-21
7dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 4e-17
8gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 84 6e-13
9gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full... 84 6e-13
10gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 68 4e-08
11gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 68 4e-08
12gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 64 6e-07
13gb|AY107519.1| Zea mays PCO078033 mRNA sequence 50 0.009
14gb|DQ428476.1| Sorghum propinquum locus PRC1113 genomic sequence 44 0.55
15gb|DQ428475.1| Sorghum bicolor voucher PI585454 locus PRC1113 ge... 44 0.55
16gb|DQ428474.1| Sorghum bicolor voucher PI267539 locus PRC1113 ge... 44 0.55
17gb|DQ428473.1| Sorghum bicolor voucher PI267408 locus PRC1113 ge... 44 0.55
18gb|DQ428472.1| Sorghum bicolor voucher PI221607 locus PRC1113 ge... 44 0.55
19gb|DQ428471.1| Sorghum bicolor voucher PI152702 locus PRC1113 ge... 44 0.55
20gb|DQ428470.1| Sorghum bicolor voucher NSL92371 locus PRC1113 ge... 44 0.55
21gb|DQ428469.1| Sorghum bicolor voucher NSL87902b locus PRC1113 g... 44 0.55
22gb|DQ428468.1| Sorghum bicolor voucher NSL87902a locus PRC1113 g... 44 0.55
23gb|DQ428467.1| Sorghum bicolor voucher NSL87666 locus PRC1113 ge... 44 0.55
24gb|DQ428466.1| Sorghum bicolor voucher NSL77217 locus PRC1113 ge... 44 0.55
25gb|DQ428465.1| Sorghum bicolor voucher NSL77034 locus PRC1113 ge... 44 0.55
26gb|DQ428464.1| Sorghum bicolor voucher NSL56174 locus PRC1113 ge... 44 0.55
27gb|DQ428463.1| Sorghum bicolor voucher NSL56003 locus PRC1113 ge... 44 0.55
28gb|DQ428462.1| Sorghum bicolor voucher NSL55243 locus PRC1113 ge... 44 0.55
29gb|DQ428461.1| Sorghum bicolor voucher NSL51365 locus PRC1113 ge... 44 0.55
30gb|DQ428460.1| Sorghum bicolor voucher NSL51030b locus PRC1113 g... 44 0.55
31gb|DQ428459.1| Sorghum bicolor voucher NSL51030a locus PRC1113 g... 44 0.55
32gb|DQ428458.1| Sorghum bicolor voucher NSL50875 locus PRC1113 ge... 44 0.55
33ref|XM_670200.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.2
34gb|AC094963.9| Rattus norvegicus X BAC CH230-6L20 (Children's Ho... 42 2.2
35gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 8.5
36gb|AC091397.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 8.5
37emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chr... 40 8.5
38emb|CR933001.12| Zebrafish DNA sequence from clone DKEY-158B11 i... 40 8.5
39gb|AC015795.20| Homo sapiens chromosome 17, clone RP11-613C6, co... 40 8.5
40gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Can... 40 8.5
41gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y,... 40 8.5
42emb|BX294113.7| Zebrafish DNA sequence from clone DKEYP-73G8 in ... 40 8.5
43gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y,... 40 8.5
44dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
45dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 8.5
46ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5... 40 8.5
47gb|AC149314.2| Phakopsora pachyrhizi clone JGIAFNA-101K12, compl... 40 8.5
48emb|BX950199.14| Zebrafish DNA sequence from clone CH211-215A11 ... 40 8.5
49gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, comple... 40 8.5
50dbj|AP006401.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 8.5 
>gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete cds
          Length = 1373

 Score =  456 bits (230), Expect = e-125
 Identities = 491/576 (85%), Gaps = 4/576 (0%)
 Strand = Plus / Minus

                                                                        
Query: 47   aattacaagcttgtcgctgaagctgttacatgataatatccttgcaaacataaggaaccc 106
            ||||||||||||||| || | ||||||||||||||||||||||||||||||| || |   
Sbjct: 1297 aattacaagcttgtcact-aggctgttacatgataatatccttgcaaacatagggcagtg 1239

                                                                        
Query: 107  cctttatttttctttatcggagcacaccatccatacataaacaaagcacactgcaagggt 166
            |||||||||||||| | |  |||| |||||||||||||||| ||||||||||| ||||||
Sbjct: 1238 cctttatttttcttcagcaaagcaaaccatccatacataaataaagcacactgaaagggt 1179

                                                                        
Query: 167  acttcagagtatcccttgttagataaacttttgagaaaggctttacttgtagacctcgat 226
            |||  ||||||   ||||   |||||||||||  ||||   || ||||||||||||||||
Sbjct: 1178 actaaagagtacaacttg---gataaacttttatgaaaccgttcacttgtagacctcgat 1122

                                                                        
Query: 227  gacacctcgtgcacccattttcttgataattttgtagtcggtgaaccctgctttcatgaa 286
             |||||||||||||||| |||||||| ||||||||||||| | |||||||||||| ||||
Sbjct: 1121 aacacctcgtgcacccagtttcttgacaattttgtagtcgctaaaccctgctttcgtgaa 1062

                                                                        
Query: 287  gaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacacaagcatgagcat 346
            ||| ||  |||||| |||||| || ||||||||||| |||||||||||||||||||| ||
Sbjct: 1061 gagctcatgccagttattttcacttcgttgacggcctctcgtgaacacaagcatgaggat 1002

                                                                        
Query: 347  gtccatgagagtctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatc 406
            |||||| ||||| ||  ||| |||||||||  | || ||||| ||  ||||||| || ||
Sbjct: 1001 gtccatcagagtttgttccttaaacatgacttggcccaatgagggggcgaccacaatgtc 942

                                                                        
Query: 407  aatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttag 466
             || ||||||||||| ||||||||||| || ||||||||||||| |||||| ||||||||
Sbjct: 941  tattacaatcacctttcctccctcctcgcgtgaaggaatggcatccttacattgggttag 882

                                                                        
Query: 467  gatcttcacacaatcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcctg 526
            |||||| | |||||| |||| |||| |||||||||  ||||||||||||||||| |||||
Sbjct: 881  gatcttaaaacaatcctcgtaactcaagtggtgcaaaacaagcttgagcatcaccgcctg 822

                                                                        
Query: 527  agcctttgggacagtgtggaacaggtcaccagcgacatagttgactacacagtcggatgg 586
            |||||||||||| |||||||| ||||| || || | ||||||||||| || ||| || ||
Sbjct: 821  agcctttgggacggtgtggaagaggtcgccggcaaaatagttgactataccgtcagaagg 762

                                                
Query: 587  agttttttctatgaccttggggagatccagcacggt 622
            |||||| || || |||||||||||||||||||||||
Sbjct: 761  agttttgtcgatcaccttggggagatccagcacggt 726
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
            insert sequence
          Length = 1362

 Score =  115 bits (58), Expect = 2e-22
 Identities = 172/210 (81%)
 Strand = Plus / Minus

                                                                        
Query: 359  ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 418
            |||||| |||||||| || ||||||| ||| ||| | ||||  || || ||||  || ||
Sbjct: 1007 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 948

                                                                        
Query: 419  cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 478
            ||||||||||||||| || || |||||||| ||  | ||||| || | ||||||||| ||
Sbjct: 947  cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 888

                                                                        
Query: 479  atcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcctgagcctttgggac 538
            ||| || || |||||||||||||  |||||||||||||||||||| ||||||  ||| ||
Sbjct: 887  atcatcatcgctccagtggtgcaatacaagcttgagcatcacggcttgagccggtggcac 828

                                          
Query: 539  agtgtggaacaggtcaccagcgacatagtt 568
             |||||||||| |||||| || ||||||||
Sbjct: 827  ggtgtggaacaagtcacctgcaacatagtt 798
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
            insert sequence
          Length = 1264

 Score =  115 bits (58), Expect = 2e-22
 Identities = 172/210 (81%)
 Strand = Plus / Minus

                                                                        
Query: 359  ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 418
            |||||| |||||||| || ||||||| ||| ||| | ||||  || || ||||  || ||
Sbjct: 1012 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 953

                                                                        
Query: 419  cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 478
            ||||||||||||||| || || |||||||| ||  | ||||| || | ||||||||| ||
Sbjct: 952  cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 893

                                                                        
Query: 479  atcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcctgagcctttgggac 538
            ||| || || |||||||||||||  |||||||||||||||||||| ||||||  ||| ||
Sbjct: 892  atcatcatcgctccagtggtgcaatacaagcttgagcatcacggcttgagccggtggcac 833

                                          
Query: 539  agtgtggaacaggtcaccagcgacatagtt 568
             |||||||||| |||||| || ||||||||
Sbjct: 832  ggtgtggaacaagtcacctgcaacatagtt 803
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score =  111 bits (56), Expect = 3e-21
 Identities = 238/296 (80%), Gaps = 2/296 (0%)
 Strand = Plus / Minus

                                                                         
Query: 216   tagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcggtgaaccct 275
             |||||||||| |||| |||| ||||| | |||||| | ||| || |||||  |||| |||
Sbjct: 64471 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 64412

                                                                         
Query: 276   gctttcatgaagaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacaca 335
             ||| ||||||| |||||  |||| ||||||||| | |||||||| || || ||   ||| 
Sbjct: 64411 gctgtcatgaacaggtcatgccaatcattttcgttccgttgacgacctctagtattcacc 64352

                                                                         
Query: 336   agcatgagcatgtccatga-gagtctgggcctcaaacatgacaggtcctaatgatggttc 394
             | ||||||||||||||| | ||| ||| || || ||||| ||||| || || ||||||||
Sbjct: 64351 atcatgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttc 64293

                                                                         
Query: 395   gaccacgatatcaatgacaatcaccttccctccctcctcacgggaaggaatggcattctt 454
              |||| |||||| |||||||||| |||||| |||||||  || |||||||| || || ||
Sbjct: 64292 aaccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagccttttt 64233

                                                                     
Query: 455   acactgggttaggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
              ||||| | |||||||||||| || || ||||| ||| |||| ||||| |||||||
Sbjct: 64232 gcactgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 64177



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                          
Query: 359    ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 418
              |||||| |||||||| || ||||||| ||| ||| | ||||  || || ||||  || ||
Sbjct: 123014 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 122955

                                                                          
Query: 419    cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 478
              ||||||||||||||| || || |||||||| ||  | ||||| || | ||||||||| ||
Sbjct: 122954 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 122895

                                              
Query: 479    atcgtcgtcactccagtggtgcagcacaagct 510
              ||| || || |||||||||||||  |||||||
Sbjct: 122894 atcatcatcgctccagtggtgcaatacaagct 122863



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                          
Query: 509    cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 568
              ||||||||||||||| ||||||  ||| || |||||||||| |||||| || ||||||||
Sbjct: 119697 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 119638



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                          
Query: 438    gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 497
              ||||||||||| ||||| || || |  ||||| |||||||| ||||| || |||||||||
Sbjct: 128503 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 128562
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  111 bits (56), Expect = 3e-21
 Identities = 238/296 (80%), Gaps = 2/296 (0%)
 Strand = Plus / Plus

                                                                            
Query: 216      tagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcggtgaaccct 275
                |||||||||| |||| |||| ||||| | |||||| | ||| || |||||  |||| |||
Sbjct: 11549317 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11549376

                                                                            
Query: 276      gctttcatgaagaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacaca 335
                ||| ||||||| |||||  |||| ||||||||| | |||||||| || || ||   ||| 
Sbjct: 11549377 gctgtcatgaacaggtcatgccaatcattttcgttccgttgacgacctctagtattcacc 11549436

                                                                            
Query: 336      agcatgagcatgtccatga-gagtctgggcctcaaacatgacaggtcctaatgatggttc 394
                | ||||||||||||||| | ||| ||| || || ||||| ||||| || || ||||||||
Sbjct: 11549437 atcatgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttc 11549495

                                                                            
Query: 395      gaccacgatatcaatgacaatcaccttccctccctcctcacgggaaggaatggcattctt 454
                 |||| |||||| |||||||||| |||||| |||||||  || |||||||| || || ||
Sbjct: 11549496 aaccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagccttttt 11549555

                                                                        
Query: 455      acactgggttaggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
                 ||||| | |||||||||||| || || ||||| ||| |||| ||||| |||||||
Sbjct: 11549556 gcactgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 11549611



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                            
Query: 405      tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 464
                |||||||  |||||||||||||| || |  ||||  ||||| || |||||||| || |||
Sbjct: 11329787 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 11329846

                                                              
Query: 465      aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
                || || ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 11329847 agtattttcacacaatcctcgtcactccagtggtgaagcacaagct 11329892



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                            
Query: 414      atcaccttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttc 473
                |||||||||||||| || || ||||  ||||| || ||||| || |  | ||||||||||
Sbjct: 11354087 atcaccttccctccatcttctcgggttggaatagctttcttgcaattagctaggatcttc 11354146

                                                     
Query: 474      acacaatcgtcgtcactccagtggtgcagcacaagct 510
                |||||||| |||||| |||||||||| ||||||||||
Sbjct: 11354147 acacaatcctcgtcattccagtggtgaagcacaagct 11354183



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                           
Query: 408     atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 467
               ||||| |||||||||||||||||||  || ||||| ||||| ||||| |||||||  |||
Sbjct: 7137724 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 7137783

                                         
Query: 468     atcttcacacaatcgtcgtcactcca 493
               |||||||| || ||||| || |||||
Sbjct: 7137784 atcttcacgcagtcgtcatcgctcca 7137809



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                            
Query: 359      ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 418
                |||||| |||||||| || ||||||| ||| ||| | ||||  || || ||||  || ||
Sbjct: 11490774 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 11490833

                                                                            
Query: 419      cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 478
                ||||||||||||||| || || |||||||| ||  | ||||| || | ||||||||| ||
Sbjct: 11490834 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 11490893

                                                
Query: 479      atcgtcgtcactccagtggtgcagcacaagct 510
                ||| || || |||||||||||||  |||||||
Sbjct: 11490894 atcatcatcgctccagtggtgcaatacaagct 11490925



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                            
Query: 509      cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 568
                ||||||||||||||| ||||||  ||| || |||||||||| |||||| || ||||||||
Sbjct: 11494091 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 11494150



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 268      tgaaccctgctttcatgaagaggtctcgccagtcattttcg 308
                |||| ||||||||| ||||||| || |||||||||||||||
Sbjct: 11329653 tgaagcctgctttcttgaagagatcacgccagtcattttcg 11329693



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 240      cccattttcttgataattttgtagtcggtgaaccctgctttcatgaagaggtctcgccag 299
                |||| |||||| | ||| ||||||||  |||| ||| ||||||||||||| |||||||| 
Sbjct: 11294558 cccaatttcttcacaatcttgtagtccctgaagcctactttcatgaagagatctcgccaa 11294617

                     
Query: 300      tcatt 304
                |||||
Sbjct: 11294618 tcatt 11294622



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 438      gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 497
                ||||||||||| ||||| || || |  ||||| |||||||| ||||| || |||||||||
Sbjct: 11485285 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 11485226
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  111 bits (56), Expect = 3e-21
 Identities = 238/296 (80%), Gaps = 2/296 (0%)
 Strand = Plus / Plus

                                                                            
Query: 216      tagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcggtgaaccct 275
                |||||||||| |||| |||| ||||| | |||||| | ||| || |||||  |||| |||
Sbjct: 11628506 tagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaatcct 11628565

                                                                            
Query: 276      gctttcatgaagaggtctcgccagtcattttcgctacgttgacggcccctcgtgaacaca 335
                ||| ||||||| |||||  |||| ||||||||| | |||||||| || || ||   ||| 
Sbjct: 11628566 gctgtcatgaacaggtcatgccaatcattttcgttccgttgacgacctctagtattcacc 11628625

                                                                            
Query: 336      agcatgagcatgtccatga-gagtctgggcctcaaacatgacaggtcctaatgatggttc 394
                | ||||||||||||||| | ||| ||| || || ||||| ||||| || || ||||||||
Sbjct: 11628626 atcatgagcatgtccatcatgag-ctgcgcttcgaacattacaggccccaaagatggttc 11628684

                                                                            
Query: 395      gaccacgatatcaatgacaatcaccttccctccctcctcacgggaaggaatggcattctt 454
                 |||| |||||| |||||||||| |||||| |||||||  || |||||||| || || ||
Sbjct: 11628685 aaccaagatatctatgacaatcaacttcccgccctcctttcgtgaaggaatagccttttt 11628744

                                                                        
Query: 455      acactgggttaggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
                 ||||| | |||||||||||| || || ||||| ||| |||| ||||| |||||||
Sbjct: 11628745 gcactgagctaggatcttcacgcagtcatcgtcgctcaagtgatgcagaacaagct 11628800



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                            
Query: 405      tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 464
                |||||||  |||||||||||||| || |  ||||  ||||| || |||||||| || |||
Sbjct: 11408976 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 11409035

                                                              
Query: 465      aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
                || || ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 11409036 agtattttcacacaatcctcgtcactccagtggtgaagcacaagct 11409081



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                            
Query: 414      atcaccttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttc 473
                |||||||||||||| || || ||||  ||||| || ||||| || |  | ||||||||||
Sbjct: 11433276 atcaccttccctccatcttctcgggttggaatagctttcttgcaattagctaggatcttc 11433335

                                                     
Query: 474      acacaatcgtcgtcactccagtggtgcagcacaagct 510
                |||||||| |||||| |||||||||| ||||||||||
Sbjct: 11433336 acacaatcctcgtcattccagtggtgaagcacaagct 11433372



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                           
Query: 408     atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 467
               ||||| |||||||||||||||||||  || ||||| ||||| ||||| |||||||  |||
Sbjct: 7203695 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 7203754

                                         
Query: 468     atcttcacacaatcgtcgtcactcca 493
               |||||||| || ||||| || |||||
Sbjct: 7203755 atcttcacgcagtcgtcatcgctcca 7203780



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Plus

                                                                            
Query: 359      ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 418
                |||||| |||||||| || ||||||| ||| ||| | ||||  || || ||||  || ||
Sbjct: 11569963 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 11570022

                                                                            
Query: 419      cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 478
                ||||||||||||||| || || |||||||| ||  | ||||| || | ||||||||| ||
Sbjct: 11570023 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 11570082

                                                
Query: 479      atcgtcgtcactccagtggtgcagcacaagct 510
                ||| || || |||||||||||||  |||||||
Sbjct: 11570083 atcatcatcgctccagtggtgcaatacaagct 11570114



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                            
Query: 509      cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 568
                ||||||||||||||| ||||||  ||| || |||||||||| |||||| || ||||||||
Sbjct: 11573280 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 11573339



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 268      tgaaccctgctttcatgaagaggtctcgccagtcattttcg 308
                |||| ||||||||| ||||||| || |||||||||||||||
Sbjct: 11408842 tgaagcctgctttcttgaagagatcacgccagtcattttcg 11408882



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 240      cccattttcttgataattttgtagtcggtgaaccctgctttcatgaagaggtctcgccag 299
                |||| |||||| | ||| ||||||||  |||| ||| ||||||||||||| |||||||| 
Sbjct: 11373747 cccaatttcttcacaatcttgtagtccctgaagcctactttcatgaagagatctcgccaa 11373806

                     
Query: 300      tcatt 304
                |||||
Sbjct: 11373807 tcatt 11373811



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                            
Query: 438      gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 497
                ||||||||||| ||||| || || |  ||||| |||||||| ||||| || |||||||||
Sbjct: 11564474 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 11564415
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>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
           insert sequence
          Length = 1262

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 97/113 (85%)
 Strand = Plus / Minus

                                                                       
Query: 405 tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 464
           |||||||  |||||||||||||| || |  ||||  ||||| || |||||||| || |||
Sbjct: 978 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 919

                                                                
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagcttgagcat 517
           || || ||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 918 agtattttcacacaatcctcgtcactccagtggtgaagcacaagcttgagcat 866



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 268  tgaaccctgctttcatgaagaggtctcgccagtcattttcg 308
            |||| ||||||||| ||||||| || |||||||||||||||
Sbjct: 1112 tgaagcctgctttcttgaagagatcacgccagtcattttcg 1072
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                          
Query: 405    tcaatgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggtt 464
              |||||||  |||||||||||||| || |  ||||  ||||| || |||||||| || |||
Sbjct: 116145 tcaatgatgatcaccttccctccatctttgcgggctggaatagctttcttacattgagtt 116204

                                                            
Query: 465    aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
              || || ||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 116205 agtattttcacacaatcctcgtcactccagtggtgaagcacaagct 116250



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 82/97 (84%)
 Strand = Plus / Plus

                                                                          
Query: 414    atcaccttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttc 473
              |||||||||||||| || || ||||  ||||| || ||||| || |  | ||||||||||
Sbjct: 140445 atcaccttccctccatcttctcgggttggaatagctttcttgcaattagctaggatcttc 140504

                                                   
Query: 474    acacaatcgtcgtcactccagtggtgcagcacaagct 510
              |||||||| |||||| |||||||||| ||||||||||
Sbjct: 140505 acacaatcctcgtcattccagtggtgaagcacaagct 140541



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 268    tgaaccctgctttcatgaagaggtctcgccagtcattttcg 308
              |||| ||||||||| ||||||| || |||||||||||||||
Sbjct: 116011 tgaagcctgctttcttgaagagatcacgccagtcattttcg 116051



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                         
Query: 240   cccattttcttgataattttgtagtcggtgaaccctgctttcatgaagaggtctcgccag 299
             |||| |||||| | ||| ||||||||  |||| ||| ||||||||||||| |||||||| 
Sbjct: 80916 cccaatttcttcacaatcttgtagtccctgaagcctactttcatgaagagatctcgccaa 80975

                  
Query: 300   tcatt 304
             |||||
Sbjct: 80976 tcatt 80980
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>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 770

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 111/134 (82%)
 Strand = Plus / Minus

                                                                       
Query: 435 cgggaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccag 494
           |||||||| ||||| ||||| || || |  |||||||| |  ||||| ||||| ||||||
Sbjct: 289 cgggaaggtatggccttcttgcattgagcgaggatcttgatgcaatcctcgtcgctccag 230

                                                                       
Query: 495 tggtgcagcacaagcttgagcatcacggcctgagcctttgggacagtgtggaacaggtca 554
             ||| || |||||||||||||| |||||||||||   |||||| || ||||| ||||||
Sbjct: 229 aagtgtagaacaagcttgagcatgacggcctgagctggtgggacggtatggaagaggtca 170

                         
Query: 555 ccagcgacatagtt 568
           ||||||||||||||
Sbjct: 169 ccagcgacatagtt 156



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 216 tagacctcgatgacacctcg 235
           ||||||||||||||||||||
Sbjct: 505 tagacctcgatgacacctcg 486
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>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                         
Query: 408   atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 467
             ||||| |||||||||||||||||||  || ||||| ||||| ||||| |||||||  |||
Sbjct: 44831 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 44772

                                       
Query: 468   atcttcacacaatcgtcgtcactcca 493
             |||||||| || ||||| || |||||
Sbjct: 44771 atcttcacgcagtcgtcatcgctcca 44746
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                         
Query: 408   atgacaatcaccttccctccctcctcacgggaaggaatggcattcttacactgggttagg 467
             ||||| |||||||||||||||||||  || ||||| ||||| ||||| |||||||  |||
Sbjct: 50944 atgacgatcaccttccctccctcctttcgtgaagggatggctttcttgcactgggacagg 51003

                                       
Query: 468   atcttcacacaatcgtcgtcactcca 493
             |||||||| || ||||| || |||||
Sbjct: 51004 atcttcacgcagtcgtcatcgctcca 51029
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 122/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 359  ctgggcctcaaacatgacaggtcctaatgatggttcgaccacgatatcaatgacaatcac 418
            |||||| |||||||| || ||||||| ||| ||| | ||||  || || ||||  || ||
Sbjct: 8763 ctgggcttcaaacattactggtcctagtgaaggtccaaccagtatctctatgatgatgac 8704

                                                                        
Query: 419  cttccctccctcctcacgggaaggaatggcattcttacactgggttaggatcttcacaca 478
            ||||||||||||||| || || |||||||| ||  | ||||| || | ||||||||| ||
Sbjct: 8703 cttccctccctcctctcgtgatggaatggcctttctgcactgagtcaagatcttcacgca 8644

                                            
Query: 479  atcgtcgtcactccagtggtgcagcacaagct 510
            ||| || || |||||||||||||  |||||||
Sbjct: 8643 atcatcatcgctccagtggtgcaatacaagct 8612



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                        
Query: 509  cttgagcatcacggcctgagcctttgggacagtgtggaacaggtcaccagcgacatagtt 568
            ||||||||||||||| ||||||  ||| || |||||||||| |||||| || ||||||||
Sbjct: 5446 cttgagcatcacggcttgagccggtggcacggtgtggaacaagtcacctgcaacatagtt 5387



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                         
Query: 438   gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 497
             ||||||||||| ||||| || || |  ||||| |||||||| ||||| || |||||||||
Sbjct: 14252 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 14311
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>gb|AY107519.1| Zea mays PCO078033 mRNA sequence
          Length = 1299

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 215  gtagacctcgatgacacctcgtgcacccattttcttgataattttgtagtcgg 267
            |||||||||||||||||| || || || |||||||||| ||  ||||||||||
Sbjct: 1103 gtagacctcgatgacaccacgagctccgattttcttgacaaccttgtagtcgg 1051



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                       
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagcttgagcatcacggcc 524
           |||||||| || || |||||||| ||||||  |||||| || ||||||||||| || |||
Sbjct: 853 aggatcttgacgcagtcgtcgtcgctccagaagtgcaggacgagcttgagcatgacagcc 794

             
Query: 525 tg 526
           ||
Sbjct: 793 tg 792
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>gb|DQ428476.1| Sorghum propinquum locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428475.1| Sorghum bicolor voucher PI585454 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428474.1| Sorghum bicolor voucher PI267539 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428473.1| Sorghum bicolor voucher PI267408 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428472.1| Sorghum bicolor voucher PI221607 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428471.1| Sorghum bicolor voucher PI152702 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428470.1| Sorghum bicolor voucher NSL92371 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428469.1| Sorghum bicolor voucher NSL87902b locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428468.1| Sorghum bicolor voucher NSL87902a locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428467.1| Sorghum bicolor voucher NSL87666 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428466.1| Sorghum bicolor voucher NSL77217 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428465.1| Sorghum bicolor voucher NSL77034 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428464.1| Sorghum bicolor voucher NSL56174 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428463.1| Sorghum bicolor voucher NSL56003 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428462.1| Sorghum bicolor voucher NSL55243 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428461.1| Sorghum bicolor voucher NSL51365 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428460.1| Sorghum bicolor voucher NSL51030b locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
to top
>gb|DQ428459.1| Sorghum bicolor voucher NSL51030a locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>gb|DQ428458.1| Sorghum bicolor voucher NSL50875 locus PRC1113 genomic sequence
          Length = 666

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 465 aggatcttcacacaatcgtcgtcactccagtggtgcagcacaagct 510
           ||||| ||||| || || || ||| |||||||||||||||||||||
Sbjct: 649 aggatgttcacgcagtcctcatcagtccagtggtgcagcacaagct 604
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>ref|XM_670200.1| Plasmodium berghei strain ANKA hypothetical protein (PB104271.00.0)
            partial mRNA
          Length = 2088

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 241  ccattttcttgataattttgt 261
            |||||||||||||||||||||
Sbjct: 1345 ccattttcttgataattttgt 1325
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>gb|AC094963.9| Rattus norvegicus X BAC CH230-6L20 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 213440

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 242   cattttcttgataattttgta 262
             |||||||||||||||||||||
Sbjct: 76825 cattttcttgataattttgta 76805
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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    acaggtcctaatgatggttc 394
              ||||||||||||||||||||
Sbjct: 859378 acaggtcctaatgatggttc 859359
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>gb|AC091397.2| Rattus norvegicus strain Brown Norway clone RP31-246E3, complete
             sequence
          Length = 73920

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 592   tttctatgaccttggggaga 611
             ||||||||||||||||||||
Sbjct: 28070 tttctatgaccttggggaga 28089
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>emb|AL138711.13| Human DNA sequence from clone RP11-495J3 on chromosome 13q12.3-14.11
              Contains a ribosomal protein S12 (RPS12) pseudogene and a
              CpG island, complete sequence
          Length = 182178

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 242    cattttcttgataattttgt 261
              ||||||||||||||||||||
Sbjct: 120367 cattttcttgataattttgt 120386
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>emb|CR933001.12| Zebrafish DNA sequence from clone DKEY-158B11 in linkage group 5,
             complete sequence
          Length = 158802

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   cattttcttgataattttgt 261
             ||||||||||||||||||||
Sbjct: 91007 cattttcttgataattttgt 90988
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>gb|AC015795.20| Homo sapiens chromosome 17, clone RP11-613C6, complete sequence
          Length = 170862

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   agttttttctatgaccttgg 606
             ||||||||||||||||||||
Sbjct: 89593 agttttttctatgaccttgg 89574
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>gb|AC061710.16| Homo sapiens 3 BAC RP11-395F21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 187657

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    ttagataaacttttgagaaa 204
              ||||||||||||||||||||
Sbjct: 100340 ttagataaacttttgagaaa 100321
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>gb|AC022486.4|AC022486 Homo sapiens BAC clone RP11-569J3 from Y, complete sequence
          Length = 156357

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    ataaacaaagcacactgcaa 162
              ||||||||||||||||||||
Sbjct: 116672 ataaacaaagcacactgcaa 116691
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>emb|BX294113.7| Zebrafish DNA sequence from clone DKEYP-73G8 in linkage group 24,
             complete sequence
          Length = 199820

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 331   acacaagcatgagcatgtccatga 354
             |||||||||| |||||||||||||
Sbjct: 68031 acacaagcattagcatgtccatga 68008
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>gb|AC007379.2|AC007379 Homo sapiens BAC clone RP11-143C1 from Y, complete sequence
          Length = 174082

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ataaacaaagcacactgcaa 162
             ||||||||||||||||||||
Sbjct: 21693 ataaacaaagcacactgcaa 21674
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
           insert sequence
          Length = 1300

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 438 gaaggaatggcattcttacactgggttaggatcttcacacaatcgtcgtcactccagtgg 497
           ||||||||||| ||||| || || |  ||||| |||||||| ||||| || |||||||||
Sbjct: 965 gaaggaatggctttcttgcattgtgcaaggattttcacacagtcgtcatcgctccagtgg 906
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>dbj|AP002039.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MCB22
          Length = 29694

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 586   gagttttttctatgaccttgggga 609
             ||||||||||||| ||||||||||
Sbjct: 26081 gagttttttctataaccttgggga 26058
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>ref|NG_004636.1| Homo sapiens chromosome Y palindromes P4 and P5 (P4-P5@) on chromosome Y
          Length = 1351786

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 143     ataaacaaagcacactgcaa 162
               ||||||||||||||||||||
Sbjct: 1174694 ataaacaaagcacactgcaa 1174675



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 143     ataaacaaagcacactgcaa 162
               ||||||||||||||||||||
Sbjct: 1113516 ataaacaaagcacactgcaa 1113535
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>gb|AC149314.2| Phakopsora pachyrhizi clone JGIAFNA-101K12, complete sequence
          Length = 35483

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 331   acacaagcatgagcatgtccatgagagt 358
             |||||| ||||||||||| |||||||||
Sbjct: 12685 acacaatcatgagcatgtgcatgagagt 12658
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>emb|BX950199.14| Zebrafish DNA sequence from clone CH211-215A11 in linkage group 24,
              complete sequence
          Length = 213091

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 331    acacaagcatgagcatgtccatga 354
              |||||||||| |||||||||||||
Sbjct: 207721 acacaagcattagcatgtccatga 207744
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>gb|AC125380.4| Mus musculus BAC clone RP23-204N23 from 1, complete sequence
          Length = 214005

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   tacataaacaaagcacactg 159
             ||||||||||||||||||||
Sbjct: 31022 tacataaacaaagcacactg 31003
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>dbj|AP006401.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT18E13, TM0283,
             complete sequence
          Length = 112721

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   tgagaaaggctttacttgta 217
             ||||||||||||||||||||
Sbjct: 91431 tgagaaaggctttacttgta 91412


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,183,631
Number of Sequences: 3902068
Number of extensions: 6183631
Number of successful extensions: 127809
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127509
Number of HSP's gapped (non-prelim): 292
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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