ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14j01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474115.1| Oryza sativa (japonica cultivar-group), predic... 230 4e-57
2dbj|AK071891.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 4e-57
3dbj|AK064227.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 1e-54
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
5emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 96 2e-16
6emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4,... 96 2e-16
7gb|AC133583.13| Mus musculus chromosome 12, clone RP24-444A9, co... 44 0.50
8gb|AC119810.8| Mus musculus chromosome 7, clone RP23-54G21, comp... 44 0.50
9ref|XM_949815.1| Theileria annulata strain Ankara splicing facto... 44 0.50
10gb|AC015528.14| Homo sapiens chromosome 8, clone RP11-179A23, co... 44 0.50
11gb|AC112909.4| Homo sapiens 3 BAC RP11-814O5 (Roswell Park Cance... 44 0.50
12gb|AC160946.6| Mus musculus 10 BAC RP23-175G6 (Roswell Park Canc... 44 0.50
13gb|AC153917.6| Mus musculus 10 BAC RP23-283D8 (Roswell Park Canc... 44 0.50
14gb|AC133866.14| Mus musculus chromosome 12, clone RP24-478O24, c... 44 0.50
15ref|NM_120702.1| Arabidopsis thaliana unknown protein AT5G06200 ... 42 2.0
16gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosom... 42 2.0
17emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC... 42 2.0
18dbj|AP002544.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.0
19emb|BX649543.6| Zebrafish DNA sequence from clone DKEY-238K23 in... 42 2.0
20gb|BC073584.1| Xenopus laevis MGC82865 protein, mRNA (cDNA clone... 40 7.8
21gb|BC073572.1| Xenopus laevis MGC82865 protein, mRNA (cDNA clone... 40 7.8
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.8
23gb|AC133176.2| Mus musculus BAC clone RP24-111D1 from chromosome... 40 7.8
24ref|XM_758137.1| Theileria parva strain Muguga chromosome 3 spli... 40 7.8
25gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genom... 40 7.8
26emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on ch... 40 7.8
27gb|AC010297.5| Homo sapiens chromosome 5 clone CTB-162J7, comple... 40 7.8
28gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Ro... 40 7.8
29emb|BX005126.10| Zebrafish DNA sequence from clone CH211-129O9 i... 40 7.8
30gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, co... 40 7.8
31gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, comple... 40 7.8
32ref|XM_688936.1| PREDICTED: Danio rerio similar to phospholipase... 40 7.8
33gb|DQ056244.1| Sinojackia xylocarpa clone Sx9 microsatellite seq... 40 7.8
34gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosom... 40 7.8
35emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in... 40 7.8
36gb|AY150271.1| Enterobacteria phage epsilon15, complete genome 40 7.8
37gb|AC161265.2| Mus musculus BAC clone RP23-271F18 from chromosom... 40 7.8
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
39dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
40dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
41dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
42emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 ... 40 7.8
43gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, comple... 40 7.8
44emb|BX548072.14| Zebrafish DNA sequence from clone DKEYP-84A8 in... 40 7.8
45gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36... 40 7.8
46gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome... 40 7.8
47gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
48emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8
49emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb... 40 7.8
50gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosom... 40 7.8
51gb|AC132356.3| Mus musculus BAC clone RP24-119I6 from 1, complet... 40 7.8
52gb|AF064456.1|AF064456 Oryza sativa subsp. indica calmodulin-lik... 40 7.8
53gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosom... 40 7.8
54emb|AL683890.7| Mouse DNA sequence from clone RP23-120N11 on chr... 40 7.8
55emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chr... 40 7.8
56emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chro... 40 7.8
57emb|AL732477.10| Mouse DNA sequence from clone RP23-393E8 on chr... 40 7.8
58emb|AL646006.17| Mouse DNA sequence from clone RP23-168C23 on ch... 40 7.8 
>ref|XM_474115.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1635

 Score =  230 bits (116), Expect = 4e-57
 Identities = 330/402 (82%), Gaps = 3/402 (0%)
 Strand = Plus / Minus

                                                                        
Query: 172  tccttctcttgcttgttcttgacgacctttnaccctt---tccagaatctgattccatgg 228
            |||| |||||||||||||||||||| |||| ||| ||   |||||||||||   |||| |
Sbjct: 1627 tcctcctcttgcttgttcttgacgatcttttacctttggttccagaatctggcaccattg 1568

                                                                        
Query: 229  ccagtggcaccagcatacctcctttgagatcatcagcatgtgaactcttcgccatagact 288
              ||||||||||||| ||||||||||||||||||||||| |  | ||||| | || || |
Sbjct: 1567 ggagtggcaccagcaaacctcctttgagatcatcagcatttttattcttctcgatcgatt 1508

                                                                        
Query: 289  ttngtaacttaatggaatatctgaagtcttttatctgttcttccaggtcaagaatcatat 348
            |  ||||||| |||||| || |||| ||||||||||||||||| || ||| ||||  |||
Sbjct: 1507 tctgtaacttgatggaaaatttgaaatcttttatctgttcttctagatcacgaattgtat 1448

                                                                        
Query: 349  catccttcagcttnaactgtgctctctccctttcctctattcctttcactgtctggcgcc 408
            |||| |||| ||| |  || || |||||||||||||| ||| |||| | |||  | ||||
Sbjct: 1447 catctttcaacttcagttgagccctctccctttcctcaatttcttttagtgttcgacgcc 1388

                                                                        
Query: 409  atatatcctggcttttcgagagtttttcattcattncagcaactttctttttctccaaca 468
            ||||||||||| | |||| |||||||||||||||  | |||| |||||||||||||||||
Sbjct: 1387 atatatcctggttcttcgtgagtttttcattcatatctgcaagtttctttttctccaaca 1328

                                                                        
Query: 469  ttgtattttcaaacttaagttgcagctcttgaagcttatcatttatagttttatccacag 528
            ||| ||| |||| |||  |||| |  |||| |  ||||||||||| || ||||||||| |
Sbjct: 1327 ttgcattctcaatcttttgttggatttctttactcttatcatttacagctttatccactg 1268

                                                      
Query: 529  caacagaaatgtggtgttccctttctttcttagcctctgaca 570
            || |||||||||| |||||| ||||||||||||| |||||||
Sbjct: 1267 catcagaaatgtgttgttccttttctttcttagcttctgaca 1226
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>dbj|AK071891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057F24, full
            insert sequence
          Length = 1858

 Score =  230 bits (116), Expect = 4e-57
 Identities = 330/402 (82%), Gaps = 3/402 (0%)
 Strand = Plus / Minus

                                                                        
Query: 172  tccttctcttgcttgttcttgacgacctttnaccctt---tccagaatctgattccatgg 228
            |||| |||||||||||||||||||| |||| ||| ||   |||||||||||   |||| |
Sbjct: 1657 tcctcctcttgcttgttcttgacgatcttttacctttggttccagaatctggcaccattg 1598

                                                                        
Query: 229  ccagtggcaccagcatacctcctttgagatcatcagcatgtgaactcttcgccatagact 288
              ||||||||||||| ||||||||||||||||||||||| |  | ||||| | || || |
Sbjct: 1597 ggagtggcaccagcaaacctcctttgagatcatcagcatttttattcttctcgatcgatt 1538

                                                                        
Query: 289  ttngtaacttaatggaatatctgaagtcttttatctgttcttccaggtcaagaatcatat 348
            |  ||||||| |||||| || |||| ||||||||||||||||| || ||| ||||  |||
Sbjct: 1537 tctgtaacttgatggaaaatttgaaatcttttatctgttcttctagatcacgaattgtat 1478

                                                                        
Query: 349  catccttcagcttnaactgtgctctctccctttcctctattcctttcactgtctggcgcc 408
            |||| |||| ||| |  || || |||||||||||||| ||| |||| | |||  | ||||
Sbjct: 1477 catctttcaacttcagttgagccctctccctttcctcaatttcttttagtgttcgacgcc 1418

                                                                        
Query: 409  atatatcctggcttttcgagagtttttcattcattncagcaactttctttttctccaaca 468
            ||||||||||| | |||| |||||||||||||||  | |||| |||||||||||||||||
Sbjct: 1417 atatatcctggttcttcgtgagtttttcattcatatctgcaagtttctttttctccaaca 1358

                                                                        
Query: 469  ttgtattttcaaacttaagttgcagctcttgaagcttatcatttatagttttatccacag 528
            ||| ||| |||| |||  |||| |  |||| |  ||||||||||| || ||||||||| |
Sbjct: 1357 ttgcattctcaatcttttgttggatttctttactcttatcatttacagctttatccactg 1298

                                                      
Query: 529  caacagaaatgtggtgttccctttctttcttagcctctgaca 570
            || |||||||||| |||||| ||||||||||||| |||||||
Sbjct: 1297 catcagaaatgtgttgttccttttctttcttagcttctgaca 1256
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>dbj|AK064227.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-G10, full
            insert sequence
          Length = 1751

 Score =  222 bits (112), Expect = 1e-54
 Identities = 329/402 (81%), Gaps = 3/402 (0%)
 Strand = Plus / Minus

                                                                        
Query: 172  tccttctcttgcttgttcttgacgacctttnaccctt---tccagaatctgattccatgg 228
            |||| |||||||||||||||||||| |||| ||| ||   |||||||||||   |||| |
Sbjct: 1637 tcctcctcttgcttgttcttgacgatcttttacctttggttccagaatctggcaccattg 1578

                                                                        
Query: 229  ccagtggcaccagcatacctcctttgagatcatcagcatgtgaactcttcgccatagact 288
              ||||||||||||| ||||||||||||||||||||||| |  | ||||| | || || |
Sbjct: 1577 ggagtggcaccagcaaacctcctttgagatcatcagcatttttattcttctcgatcgatt 1518

                                                                        
Query: 289  ttngtaacttaatggaatatctgaagtcttttatctgttcttccaggtcaagaatcatat 348
            |  ||||||| |||||| || |||| ||||||||||||||||| || ||| ||||  |||
Sbjct: 1517 tctgtaacttgatggaaaatttgaaatcttttatctgttcttctagatcacgaattgtat 1458

                                                                        
Query: 349  catccttcagcttnaactgtgctctctccctttcctctattcctttcactgtctggcgcc 408
            |||| |||| ||| |  || || |||||||||||||| ||| |||| | |||  | ||||
Sbjct: 1457 catctttcaacttcagttgagccctctccctttcctcaatttcttttagtgttcgacgcc 1398

                                                                        
Query: 409  atatatcctggcttttcgagagtttttcattcattncagcaactttctttttctccaaca 468
            ||||||||||| | |||| |||||||||||||||  | |||| |||||||||||||||||
Sbjct: 1397 atatatcctggttcttcgtgagtttttcattcatatctgcaagtttctttttctccaaca 1338

                                                                        
Query: 469  ttgtattttcaaacttaagttgcagctcttgaagcttatcatttatagttttatccacag 528
            ||| | | |||| |||  |||| |  |||| |  ||||||||||| || ||||||||| |
Sbjct: 1337 ttgcactctcaatcttttgttggatttctttactcttatcatttacagctttatccactg 1278

                                                      
Query: 529  caacagaaatgtggtgttccctttctttcttagcctctgaca 570
            || |||||||||| |||||| ||||||||||||| |||||||
Sbjct: 1277 catcagaaatgtgttgttccttttctttcttagcttctgaca 1236
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 105/124 (84%)
 Strand = Plus / Plus

                                                                            
Query: 447      gcaactttctttttctccaacattgtattttcaaacttaagttgcagctcttgaagctta 506
                |||| |||||||||||||||||||| ||| |||| |||  |||| |  |||| |  ||||
Sbjct: 33029562 gcaagtttctttttctccaacattgcattctcaatcttttgttggatttctttactctta 33029621

                                                                            
Query: 507      tcatttatagttttatccacagcaacagaaatgtggtgttccctttctttcttagcctct 566
                ||||||| || ||||||||| ||| |||||||||| |||||| ||||||||||||| |||
Sbjct: 33029622 tcatttacagctttatccactgcatcagaaatgtgttgttccttttctttcttagcttct 33029681

                    
Query: 567      gaca 570
                ||||
Sbjct: 33029682 gaca 33029685



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 129/157 (82%), Gaps = 3/157 (1%)
 Strand = Plus / Plus

                                                                            
Query: 172      tccttctcttgcttgttcttgacgacctttnaccctt---tccagaatctgattccatgg 228
                |||| |||||||||||||||||||| |||| ||| ||   |||||||||||   |||| |
Sbjct: 33028798 tcctcctcttgcttgttcttgacgatcttttacctttggttccagaatctggcaccattg 33028857

                                                                            
Query: 229      ccagtggcaccagcatacctcctttgagatcatcagcatgtgaactcttcgccatagact 288
                  ||||||||||||| ||||||||||||||||||||||| |  | ||||| | || || |
Sbjct: 33028858 ggagtggcaccagcaaacctcctttgagatcatcagcatttttattcttctcgatcgatt 33028917

                                                     
Query: 289      ttngtaacttaatggaatatctgaagtcttttatctg 325
                |  ||||||| |||||| || |||| |||||||||||
Sbjct: 33028918 tctgtaacttgatggaaaatttgaaatcttttatctg 33028954



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 405      cgccatatatcctggcttttcgagagtttttcattcat 442
                ||||||||||||||| | |||| |||||||||||||||
Sbjct: 33029429 cgccatatatcctggttcttcgtgagtttttcattcat 33029466
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>emb|AL732337.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0821G03, complete
             sequence
          Length = 75285

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 105/124 (84%)
 Strand = Plus / Plus

                                                                         
Query: 447   gcaactttctttttctccaacattgtattttcaaacttaagttgcagctcttgaagctta 506
             |||| |||||||||||||||||||| ||| |||| |||  |||| |  |||| |  ||||
Sbjct: 59702 gcaagtttctttttctccaacattgcattctcaatcttttgttggatttctttactctta 59761

                                                                         
Query: 507   tcatttatagttttatccacagcaacagaaatgtggtgttccctttctttcttagcctct 566
             ||||||| || ||||||||| ||| |||||||||| |||||| ||||||||||||| |||
Sbjct: 59762 tcatttacagctttatccactgcatcagaaatgtgttgttccttttctttcttagcttct 59821

                 
Query: 567   gaca 570
             ||||
Sbjct: 59822 gaca 59825



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 129/157 (82%), Gaps = 3/157 (1%)
 Strand = Plus / Plus

                                                                         
Query: 172   tccttctcttgcttgttcttgacgacctttnaccctt---tccagaatctgattccatgg 228
             |||| |||||||||||||||||||| |||| ||| ||   |||||||||||   |||| |
Sbjct: 59086 tcctcctcttgcttgttcttgacgatcttttacctttggttccagaatctggcaccattg 59145

                                                                         
Query: 229   ccagtggcaccagcatacctcctttgagatcatcagcatgtgaactcttcgccatagact 288
               ||||||||||||| ||||||||||||||||||||||| |  | ||||| | || || |
Sbjct: 59146 ggagtggcaccagcaaacctcctttgagatcatcagcatttttattcttctcgattgatt 59205

                                                  
Query: 289   ttngtaacttaatggaatatctgaagtcttttatctg 325
             |  ||||||| |||||| || |||| |||||||||||
Sbjct: 59206 tctgtaacttgatggaaaatttgaaatcttttatctg 59242



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 377   cctttcctctattcctttcactgtctggcgccatatatcctggcttttcgagagtttttc 436
             ||||||||||||| |||| | |||  | ||||||||||||||| | |||| |||||||||
Sbjct: 59541 cctttcctctatttcttttagtgttcgacgccatatatcctggttcttcgtgagtttttc 59600

                   
Query: 437   attcat 442
             ||||||
Sbjct: 59601 attcat 59606
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>emb|AL606635.3|OSJN00057 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010D21,
             complete sequence
          Length = 140626

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 105/124 (84%)
 Strand = Plus / Plus

                                                                         
Query: 447   gcaactttctttttctccaacattgtattttcaaacttaagttgcagctcttgaagctta 506
             |||| |||||||||||||||||||| ||| |||| |||  |||| |  |||| |  ||||
Sbjct: 39143 gcaagtttctttttctccaacattgcattctcaatcttttgttggatttctttactctta 39202

                                                                         
Query: 507   tcatttatagttttatccacagcaacagaaatgtggtgttccctttctttcttagcctct 566
             ||||||| || ||||||||| ||| |||||||||| |||||| ||||||||||||| |||
Sbjct: 39203 tcatttacagctttatccactgcatcagaaatgtgttgttccttttctttcttagcttct 39262

                 
Query: 567   gaca 570
             ||||
Sbjct: 39263 gaca 39266



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 129/157 (82%), Gaps = 3/157 (1%)
 Strand = Plus / Plus

                                                                         
Query: 172   tccttctcttgcttgttcttgacgacctttnaccctt---tccagaatctgattccatgg 228
             |||| |||||||||||||||||||| |||| ||| ||   |||||||||||   |||| |
Sbjct: 38379 tcctcctcttgcttgttcttgacgatcttttacctttggttccagaatctggcaccattg 38438

                                                                         
Query: 229   ccagtggcaccagcatacctcctttgagatcatcagcatgtgaactcttcgccatagact 288
               ||||||||||||| ||||||||||||||||||||||| |  | ||||| | || || |
Sbjct: 38439 ggagtggcaccagcaaacctcctttgagatcatcagcatttttattcttctcgatcgatt 38498

                                                  
Query: 289   ttngtaacttaatggaatatctgaagtcttttatctg 325
             |  ||||||| |||||| || |||| |||||||||||
Sbjct: 38499 tctgtaacttgatggaaaatttgaaatcttttatctg 38535



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 405   cgccatatatcctggcttttcgagagtttttcattcat 442
             ||||||||||||||| | |||| |||||||||||||||
Sbjct: 39010 cgccatatatcctggttcttcgtgagtttttcattcat 39047
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>gb|AC133583.13| Mus musculus chromosome 12, clone RP24-444A9, complete sequence
          Length = 123042

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 379  tttcctctattcctttcactgt 400
            ||||||||||||||||||||||
Sbjct: 1070 tttcctctattcctttcactgt 1091
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>gb|AC119810.8| Mus musculus chromosome 7, clone RP23-54G21, complete sequence
          Length = 185939

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 222   tccatggccagtggcaccagca 243
             ||||||||||||||||||||||
Sbjct: 77433 tccatggccagtggcaccagca 77454
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>ref|XM_949815.1| Theileria annulata strain Ankara splicing factor subunit (TA03380)
           partial mRNA
          Length = 3327

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 449 aactttctttttctccaacatt 470
           ||||||||||||||||||||||
Sbjct: 423 aactttctttttctccaacatt 402
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>gb|AC015528.14| Homo sapiens chromosome 8, clone RP11-179A23, complete sequence
          Length = 155518

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 456   tttttctccaacattgtatttt 477
             ||||||||||||||||||||||
Sbjct: 52345 tttttctccaacattgtatttt 52324
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>gb|AC112909.4| Homo sapiens 3 BAC RP11-814O5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114411

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 371   tctctccctttcctctattcct 392
             ||||||||||||||||||||||
Sbjct: 34134 tctctccctttcctctattcct 34155
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>gb|AC160946.6| Mus musculus 10 BAC RP23-175G6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 192628

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 380   ttcctctattcctttcactgtc 401
             ||||||||||||||||||||||
Sbjct: 14066 ttcctctattcctttcactgtc 14087
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>gb|AC153917.6| Mus musculus 10 BAC RP23-283D8 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 182207

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 380   ttcctctattcctttcactgtc 401
             ||||||||||||||||||||||
Sbjct: 79941 ttcctctattcctttcactgtc 79920
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>gb|AC133866.14| Mus musculus chromosome 12, clone RP24-478O24, complete sequence
          Length = 187626

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 379   tttcctctattcctttcactgt 400
             ||||||||||||||||||||||
Sbjct: 42050 tttcctctattcctttcactgt 42029
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>ref|NM_120702.1| Arabidopsis thaliana unknown protein AT5G06200 mRNA, complete cds
          Length = 609

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 cttctcttgcttgttcttgac 194
           |||||||||||||||||||||
Sbjct: 370 cttctcttgcttgttcttgac 390
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>gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosome 15, complete
             sequence
          Length = 194622

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 462   tccaacattgtattttcaaac 482
             |||||||||||||||||||||
Sbjct: 52477 tccaacattgtattttcaaac 52497
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>emb|AL132955.1|ATF1P2 Arabidopsis thaliana DNA chromosome 3, BAC clone F1P2
          Length = 101154

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 448   caactttctttttctccaacattgt 472
             |||||||||||||| ||||||||||
Sbjct: 33400 caactttctttttcaccaacattgt 33376
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>dbj|AP002544.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBL20
          Length = 35301

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 174   cttctcttgcttgttcttgac 194
             |||||||||||||||||||||
Sbjct: 21557 cttctcttgcttgttcttgac 21577
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>emb|BX649543.6| Zebrafish DNA sequence from clone DKEY-238K23 in linkage group 20,
             complete sequence
          Length = 42367

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 134   gcattcatagttcatactagcaaaa 158
             ||||||||| |||||||||||||||
Sbjct: 34171 gcattcataattcatactagcaaaa 34195
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>gb|BC073584.1| Xenopus laevis MGC82865 protein, mRNA (cDNA clone MGC:82881
            IMAGE:5512371), complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ttaacatgcagagcttagca 108
            ||||||||||||||||||||
Sbjct: 2136 ttaacatgcagagcttagca 2117
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>gb|BC073572.1| Xenopus laevis MGC82865 protein, mRNA (cDNA clone MGC:82865
            IMAGE:5511646), complete cds
          Length = 2396

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 89   ttaacatgcagagcttagca 108
            ||||||||||||||||||||
Sbjct: 2136 ttaacatgcagagcttagca 2117
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 467      cattgtattttcaaacttaa 486
                ||||||||||||||||||||
Sbjct: 36083583 cattgtattttcaaacttaa 36083564
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>gb|AC133176.2| Mus musculus BAC clone RP24-111D1 from chromosome 14, complete sequence
          Length = 171069

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 518   tttatccacagcaacagaaa 537
             ||||||||||||||||||||
Sbjct: 39635 tttatccacagcaacagaaa 39654
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>ref|XM_758137.1| Theileria parva strain Muguga chromosome 3 splicing factor 3B
           subunit 1 (TP03_0212) partial mRNA
          Length = 3324

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 450 actttctttttctccaacat 469
           ||||||||||||||||||||
Sbjct: 419 actttctttttctccaacat 400
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>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
              sequence
          Length = 164179

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 467    cattgtattttcaaacttaa 486
              ||||||||||||||||||||
Sbjct: 145094 cattgtattttcaaacttaa 145075
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>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete
             sequence
          Length = 192919

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 371   tctctccctttcctctattccttt 394
             |||||||||||||||| |||||||
Sbjct: 94667 tctctccctttcctctcttccttt 94690
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>gb|AC010297.5| Homo sapiens chromosome 5 clone CTB-162J7, complete sequence
          Length = 157580

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 458    tttctccaacattgtatttt 477
              ||||||||||||||||||||
Sbjct: 121350 tttctccaacattgtatttt 121369
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>gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 164831

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  cctggcttttcgagagtttt 434
            ||||||||||||||||||||
Sbjct: 7946 cctggcttttcgagagtttt 7965
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>emb|BX005126.10| Zebrafish DNA sequence from clone CH211-129O9 in linkage group 5,
             complete sequence
          Length = 160487

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 459   ttctccaacattgtattttcaaacttaa 486
             ||||| ||| ||||||||||||||||||
Sbjct: 28883 ttctcaaaccttgtattttcaaacttaa 28910
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>gb|AC018953.11| Homo sapiens chromosome 8, clone RP11-573J24, complete sequence
          Length = 182712

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 447    gcaactttctttttctccaacatt 470
              ||||||||||||| ||||||||||
Sbjct: 108170 gcaactttcttttgctccaacatt 108193
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>gb|AC069133.6| Homo sapiens BAC clone RP11-579E24 from 8, complete sequence
          Length = 201146

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 447   gcaactttctttttctccaacatt 470
             ||||||||||||| ||||||||||
Sbjct: 26944 gcaactttcttttgctccaacatt 26967
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>ref|XM_688936.1| PREDICTED: Danio rerio similar to phospholipase C, delta 4
            (LOC565669), mRNA
          Length = 2271

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 233  tggcaccagcatacctcctt 252
            ||||||||||||||||||||
Sbjct: 2211 tggcaccagcatacctcctt 2230
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>gb|DQ056244.1| Sinojackia xylocarpa clone Sx9 microsatellite sequence
          Length = 518

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 370 ctctctccctttcctctatt 389
           ||||||||||||||||||||
Sbjct: 139 ctctctccctttcctctatt 120
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>gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosome 12, complete sequence
          Length = 202315

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 516    gttttatccacagcaacaga 535
              ||||||||||||||||||||
Sbjct: 118439 gttttatccacagcaacaga 118420
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>emb|BX510647.10| Zebrafish DNA sequence from clone CH211-87N9 in linkage group 5,
             complete sequence
          Length = 198695

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 459   ttctccaacattgtattttcaaacttaa 486
             ||||| ||| ||||||||||||||||||
Sbjct: 39179 ttctcaaaccttgtattttcaaacttaa 39152
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>gb|AY150271.1| Enterobacteria phage epsilon15, complete genome
          Length = 39671

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 533   agaaatgtggtgttccctttcttt 556
             |||||||||||||| |||||||||
Sbjct: 23333 agaaatgtggtgtttcctttcttt 23310
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>gb|AC161265.2| Mus musculus BAC clone RP23-271F18 from chromosome 9, complete sequence
          Length = 203839

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 518   tttatccacagcaacagaaa 537
             ||||||||||||||||||||
Sbjct: 58946 tttatccacagcaacagaaa 58965
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 458      tttctccaacattgtattttcaaa 481
                |||||||||||||||| |||||||
Sbjct: 21836894 tttctccaacattgtagtttcaaa 21836871



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 326      ttcttccaggtcaagaatcatatcatccttcagctt 361
                |||||||||||| | ||||| |||||||||| ||||
Sbjct: 13470248 ttcttccaggtctataatcaaatcatccttctgctt 13470283
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 467      cattgtattttcaaacttaa 486
                ||||||||||||||||||||
Sbjct: 36173657 cattgtattttcaaacttaa 36173638
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 212      agaatctgattccatggcca 231
                ||||||||||||||||||||
Sbjct: 34415486 agaatctgattccatggcca 34415467
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   agaatctgattccatggcca 231
             ||||||||||||||||||||
Sbjct: 97830 agaatctgattccatggcca 97811
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>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11,
              complete sequence
          Length = 158170

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    ttttctccaacattgtattt 476
              ||||||||||||||||||||
Sbjct: 148244 ttttctccaacattgtattt 148263
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>gb|AC155808.2| Mus musculus BAC clone RP24-267H3 from 12, complete sequence
          Length = 184888

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 516    gttttatccacagcaacaga 535
              ||||||||||||||||||||
Sbjct: 179637 gttttatccacagcaacaga 179656
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>emb|BX548072.14| Zebrafish DNA sequence from clone DKEYP-84A8 in linkage group 22,
              complete sequence
          Length = 188936

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    tggcaccagcatacctcctt 252
              ||||||||||||||||||||
Sbjct: 175742 tggcaccagcatacctcctt 175761
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>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete
              sequence
          Length = 295143

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    cctggcttttcgagagtttt 434
              ||||||||||||||||||||
Sbjct: 224800 cctggcttttcgagagtttt 224781
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>gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome 15, complete sequence
          Length = 184996

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   actttctttttctccaacat 469
             ||||||||||||||||||||
Sbjct: 59121 actttctttttctccaacat 59102
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 458      tttctccaacattgtattttcaaa 481
                |||||||||||||||| |||||||
Sbjct: 21765239 tttctccaacattgtagtttcaaa 21765216



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 326      ttcttccaggtcaagaatcatatcatccttcagctt 361
                |||||||||||| | ||||| |||||||||| ||||
Sbjct: 13424522 ttcttccaggtctataatcaaatcatccttctgctt 13424557
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>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 154442

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 326    ttcttccaggtcaagaatcatatcatccttcagctt 361
              |||||||||||| | ||||| |||||||||| ||||
Sbjct: 114991 ttcttccaggtctataatcaaatcatccttctgctt 114956
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>emb|AL732647.4|CNS08C9M Oryza sativa chromosome 12, . BAC OSJNBb0087J18 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 121592

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 458   tttctccaacattgtattttcaaa 481
             |||||||||||||||| |||||||
Sbjct: 86438 tttctccaacattgtagtttcaaa 86461
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>gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosome 15, complete
             sequence
          Length = 203474

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   actttctttttctccaacat 469
             ||||||||||||||||||||
Sbjct: 23677 actttctttttctccaacat 23658
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>gb|AC132356.3| Mus musculus BAC clone RP24-119I6 from 1, complete sequence
          Length = 184142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 92    acatgcagagcttagcatat 111
             ||||||||||||||||||||
Sbjct: 48502 acatgcagagcttagcatat 48521
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>gb|AF064456.1|AF064456 Oryza sativa subsp. indica calmodulin-like protein gene, complete cds
          Length = 2408

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 212  agaatctgattccatggcca 231
            ||||||||||||||||||||
Sbjct: 1133 agaatctgattccatggcca 1114
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>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence
          Length = 198471

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    tcaagaatcatatcatcctt 355
              ||||||||||||||||||||
Sbjct: 144278 tcaagaatcatatcatcctt 144259
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>emb|AL683890.7| Mouse DNA sequence from clone RP23-120N11 on chromosome 4, complete
             sequence
          Length = 187392

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   tttctttcttagcctctgac 569
             ||||||||||||||||||||
Sbjct: 67989 tttctttcttagcctctgac 67970
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>emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chromosome 4, complete
            sequence
          Length = 199537

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 543  tgttccctttctttcttagc 562
            ||||||||||||||||||||
Sbjct: 7357 tgttccctttctttcttagc 7376
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>emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chromosome X, complete
              sequence
          Length = 169053

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 549    ctttctttcttagcctctga 568
              ||||||||||||||||||||
Sbjct: 162244 ctttctttcttagcctctga 162263
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>emb|AL732477.10| Mouse DNA sequence from clone RP23-393E8 on chromosome 2, complete
             sequence
          Length = 187993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 495   tcttgaagcttatcatttat 514
             ||||||||||||||||||||
Sbjct: 69558 tcttgaagcttatcatttat 69539
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>emb|AL646006.17| Mouse DNA sequence from clone RP23-168C23 on chromosome 4, complete
              sequence
          Length = 151509

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 370    ctctctccctttcctctattcctt 393
              |||||||||||||||||| |||||
Sbjct: 109134 ctctctccctttcctctagtcctt 109111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,482,857
Number of Sequences: 3902068
Number of extensions: 7482857
Number of successful extensions: 141077
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140668
Number of HSP's gapped (non-prelim): 392
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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