ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14i23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476668.1| Oryza sativa (japonica cultivar-group), mRNA 230 5e-57
2dbj|AK065458.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 5e-57
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
4dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5gb|AY104586.1| Zea mays PCO074858 mRNA sequence 74 7e-10
6gb|BT017370.1| Zea mays clone EL01N0324H05.c mRNA sequence 52 0.002
7gb|AY108942.1| Zea mays PCO138129 mRNA sequence 52 0.002
8gb|DQ317318.1| Musa acuminata putative glycine-rich protein (GRP... 52 0.002
9gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complet... 46 0.15
10gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete... 46 0.15
11gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome... 46 0.15
12gb|AC100561.13| Mus musculus chromosome 1, clone RP23-154C4, com... 46 0.15
13gb|AC163216.10| Mus musculus chromosome 1, clone RP23-69G5, comp... 46 0.15
14emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chro... 46 0.15
15emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chro... 44 0.59
16gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, co... 44 0.59
17gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, comple... 44 0.59
18gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, comp... 42 2.3
19gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, compl... 42 2.3
20gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, co... 42 2.3
21gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosom... 42 2.3
22gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosom... 42 2.3
23gb|AC117214.3| Mus musculus BAC clone RP23-307B15 from chromosom... 42 2.3
24gb|AC109364.6| Mus musculus BAC clone RP23-127N24 from chromosom... 42 2.3
25gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, co... 42 2.3
26gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete... 42 2.3
27gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, comple... 42 2.3
28ref|XM_728829.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.3
29ref|XM_738506.1| Plasmodium chabaudi chabaudi hypothetical prote... 42 2.3
30ref|XM_674757.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.3
31emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in... 42 2.3
32emb|AL606661.23| Mouse DNA sequence from clone RP23-355P23 on ch... 42 2.3
33gb|AC154306.3| Mus musculus BAC clone RP23-376G3 from 17, comple... 42 2.3
34emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chr... 42 2.3
35emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chro... 42 2.3
36gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome ... 40 9.3
37ref|XM_516456.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 9.3
38gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
39gb|AC122773.8| Mus musculus chromosome 1, clone RP24-160N7, comp... 40 9.3
40gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, comp... 40 9.3
41gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, c... 40 9.3
42gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, comp... 40 9.3
43gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome... 40 9.3
44gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosom... 40 9.3
45gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosom... 40 9.3
46gb|AC121919.3| Mus musculus BAC clone RP24-195I15 from chromosom... 40 9.3
47gb|AC146123.2| Pan troglodytes BAC clone RP43-38F11 from 7, comp... 40 9.3
48gb|AC008163.2| Homo sapiens BAC clone RP11-5B9 from 7, complete ... 40 9.3
49emb|CR684362.2|CNS0FR06 Tetraodon nigroviridis full-length cDNA 40 9.3
50emb|CR680666.2|CNS0FO5I Tetraodon nigroviridis full-length cDNA 40 9.3
51emb|CR656466.2|CNS0F5I0 Tetraodon nigroviridis full-length cDNA 40 9.3
52gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's ... 40 9.3
53gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mR... 40 9.3
54gb|BC071960.1| Homo sapiens coiled-coil domain containing 71, mR... 40 9.3
55emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chr... 40 9.3
56gb|U56248.1|CBRG01D9 Caenorhabditis briggsae cosmid G01D9 40 9.3
57emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3 40 9.3
58gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, com... 40 9.3
59gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Canc... 40 9.3
60gb|BC079900.1| Mus musculus RIKEN cDNA 2610039C10 gene, mRNA (cD... 40 9.3
61emb|AJ632307.1| Cotesia congregata virus complete genome, segmen... 40 9.3
62gb|AC160139.2| Mus musculus BAC clone RP23-93P8 from chromosome ... 40 9.3
63gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosom... 40 9.3
64emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in ... 40 9.3
65emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in... 40 9.3
66emb|CR617305.1| full-length cDNA clone CS0DC015YD15 of Neuroblas... 40 9.3
67emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta ... 40 9.3
68emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (... 40 9.3
69emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (... 40 9.3
70dbj|AK023691.1| Homo sapiens cDNA FLJ13629 fis, clone PLACE10110... 40 9.3
71dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP20020... 40 9.3
72gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cance... 40 9.3
73gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromoso... 40 9.3
74dbj|AK163310.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 40 9.3
75gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, co... 40 9.3
76ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (... 40 9.3
77dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 40 9.3
78dbj|AK014084.1| Mus musculus 13 days embryo head cDNA, RIKEN ful... 40 9.3
79emb|CR391700.1| Gallus gallus finished cDNA, clone ChEST180c17 40 9.3
80gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosom... 40 9.3
81gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosom... 40 9.3
82gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome... 40 9.3
83gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, comp... 40 9.3
84dbj|AK012762.2| Mus musculus 10, 11 days embryo whole body cDNA,... 40 9.3
85dbj|AK012533.1| Mus musculus 11 days embryo whole body cDNA, RIK... 40 9.3
86dbj|AK011719.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 9.3
87gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, com... 40 9.3
88gb|AC160249.6| Mus musculus 10 BAC RP24-363B22 (Roswell Park Can... 40 9.3
89dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
90gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosom... 40 9.3
91gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome... 40 9.3
92gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone ... 40 9.3
93emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chrom... 40 9.3
94dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958 40 9.3
95gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosom... 40 9.3
96gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.3
97ref|NM_025642.1| Mus musculus RIKEN cDNA 2610039C10 gene (261003... 40 9.3
98emb|AL928959.9| Mouse DNA sequence from clone RP23-73I19 on chro... 40 9.3
99gb|AC136457.3| Mus musculus BAC clone RP23-76G19 from chromosome... 40 9.3
100gb|AC169519.4| Mus musculus chromosome 5, clone wi1-2285D16, com... 40 9.3
101gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, com... 40 9.3
102emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chro... 40 9.3
103emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on ch... 40 9.3 
>ref|XM_476668.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1435

 Score =  230 bits (116), Expect = 5e-57
 Identities = 250/294 (85%), Gaps = 3/294 (1%)
 Strand = Plus / Minus

                                                                       
Query: 306 aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 365
           ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 985 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 929

                                                                       
Query: 366 aaaagctgctggccaggtccctctaatgcaggggcctcagtgccctgaacacggcctttc 425
           |  | ||||||  |||||||||| || || ||||  || | |||||||||   ||| |||
Sbjct: 928 atgaactgctgcgcaggtccctcgaaagctggggtatctgggccctgaaccttgcccttc 869

                                                                       
Query: 426 tttgactttgttcgcactcctagcaggcgcaagacaaatctcgcaagctcaccgtaaagc 485
           |||||||||||||| | ||||| || ||||||||||||||| ||||| || || ||||||
Sbjct: 868 tttgactttgttcggattcctaacatgcgcaagacaaatctggcaagttcgccataaagc 809

                                                                       
Query: 486 atcccagaccgatcaaaaagctgcaacatagctgtaatgaataaatagaaggcttgtgtg 545
           ||||||||||||||||| ||||||||||||||||| || || |||||||| |||||||||
Sbjct: 808 atcccagaccgatcaaagagctgcaacatagctgtgataaacaaatagaatgcttgtgtg 749

                                                                 
Query: 546 ttttgttcaacgagaaatgcaactcgcccaaagaaactgacggcaccatgcatc 599
           || || ||||| || ||||||||||||||||||||| ||||  |||||||||||
Sbjct: 748 ttctgctcaacaaggaatgcaactcgcccaaagaaattgacaacaccatgcatc 695
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>dbj|AK065458.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023D18, full
           insert sequence
          Length = 1435

 Score =  230 bits (116), Expect = 5e-57
 Identities = 250/294 (85%), Gaps = 3/294 (1%)
 Strand = Plus / Minus

                                                                       
Query: 306 aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 365
           ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 985 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 929

                                                                       
Query: 366 aaaagctgctggccaggtccctctaatgcaggggcctcagtgccctgaacacggcctttc 425
           |  | ||||||  |||||||||| || || ||||  || | |||||||||   ||| |||
Sbjct: 928 atgaactgctgcgcaggtccctcgaaagctggggtatctgggccctgaaccttgcccttc 869

                                                                       
Query: 426 tttgactttgttcgcactcctagcaggcgcaagacaaatctcgcaagctcaccgtaaagc 485
           |||||||||||||| | ||||| || ||||||||||||||| ||||| || || ||||||
Sbjct: 868 tttgactttgttcggattcctaacatgcgcaagacaaatctggcaagttcgccataaagc 809

                                                                       
Query: 486 atcccagaccgatcaaaaagctgcaacatagctgtaatgaataaatagaaggcttgtgtg 545
           ||||||||||||||||| ||||||||||||||||| || || |||||||| |||||||||
Sbjct: 808 atcccagaccgatcaaagagctgcaacatagctgtgataaacaaatagaatgcttgtgtg 749

                                                                 
Query: 546 ttttgttcaacgagaaatgcaactcgcccaaagaaactgacggcaccatgcatc 599
           || || ||||| || ||||||||||||||||||||| ||||  |||||||||||
Sbjct: 748 ttctgctcaacaaggaatgcaactcgcccaaagaaattgacaacaccatgcatc 695
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  137 bits (69), Expect = 5e-29
 Identities = 170/203 (83%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                           
Query: 306     aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 365
               ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 2828985 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 2828929

                                                                           
Query: 366     aaaagctgctggccaggtccctctaatgcaggggcctcagtgccctgaacacggcctttc 425
               |  | ||||||  |||||||||| || || ||||  || | |||||||||   ||| |||
Sbjct: 2828928 atgaactgctgcgcaggtccctcgaaagctggggtatctgggccctgaaccttgcccttc 2828869

                                                                           
Query: 426     tttgactttgttcgcactcctagcaggcgcaagacaaatctcgcaagctcaccgtaaagc 485
               |||||||||||||| | ||||| || ||||||||||||||| ||||| || || ||||||
Sbjct: 2828868 tttgactttgttcggattcctaacatgcgcaagacaaatctggcaagttcgccataaagc 2828809

                                      
Query: 486     atcccagaccgatcaaaaagctg 508
               ||||||||||||||||| |||||
Sbjct: 2828808 atcccagaccgatcaaagagctg 2828786



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                           
Query: 506     ctgcaacatagctgtaatgaataaatagaaggcttgtgtgttttgttcaacgagaaatgc 565
               ||||||||||||||| || || |||||||| ||||||||||| || ||||| || |||||
Sbjct: 2828696 ctgcaacatagctgtgataaacaaatagaatgcttgtgtgttctgctcaacaaggaatgc 2828637

                                                         
Query: 566     aactcgcccaaagaaactgacggcaccatgcatctgtagcaa 607
               |||||||||||||||| ||||  ||||||||||||| |||||
Sbjct: 2828636 aactcgcccaaagaaattgacaacaccatgcatctgcagcaa 2828595
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>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1364A02
          Length = 137933

 Score =  137 bits (69), Expect = 5e-29
 Identities = 170/203 (83%), Gaps = 3/203 (1%)
 Strand = Plus / Minus

                                                                          
Query: 306    aaggcgtcttagtttccccaaacattgtcccatgagttgttgttggcttttggtgtctca 365
              ||||||||| ||||||||||||| |||||||||||||||||     ||||||||| ||||
Sbjct: 132546 aaggcgtctcagtttccccaaacgttgtcccatgagttgttcc---cttttggtgcctca 132490

                                                                          
Query: 366    aaaagctgctggccaggtccctctaatgcaggggcctcagtgccctgaacacggcctttc 425
              |  | ||||||  |||||||||| || || ||||  || | |||||||||   ||| |||
Sbjct: 132489 atgaactgctgcgcaggtccctcgaaagctggggtatctgggccctgaaccttgcccttc 132430

                                                                          
Query: 426    tttgactttgttcgcactcctagcaggcgcaagacaaatctcgcaagctcaccgtaaagc 485
              |||||||||||||| | ||||| || ||||||||||||||| ||||| || || ||||||
Sbjct: 132429 tttgactttgttcggattcctaacatgcgcaagacaaatctggcaagttcgccataaagc 132370

                                     
Query: 486    atcccagaccgatcaaaaagctg 508
              ||||||||||||||||| |||||
Sbjct: 132369 atcccagaccgatcaaagagctg 132347



 Score =  107 bits (54), Expect = 5e-20
 Identities = 90/102 (88%)
 Strand = Plus / Minus

                                                                          
Query: 506    ctgcaacatagctgtaatgaataaatagaaggcttgtgtgttttgttcaacgagaaatgc 565
              ||||||||||||||| || || |||||||| ||||||||||| || ||||| || |||||
Sbjct: 132257 ctgcaacatagctgtgataaacaaatagaatgcttgtgtgttctgctcaacaaggaatgc 132198

                                                        
Query: 566    aactcgcccaaagaaactgacggcaccatgcatctgtagcaa 607
              |||||||||||||||| ||||  ||||||||||||| |||||
Sbjct: 132197 aactcgcccaaagaaattgacaacaccatgcatctgcagcaa 132156
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>gb|AY104586.1| Zea mays PCO074858 mRNA sequence
          Length = 1303

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 142/177 (80%)
 Strand = Plus / Minus

                                                                       
Query: 423 ttctttgactttgttcgcactcctagcaggcgcaagacaaatctcgcaagctcaccgtaa 482
           ||||||| |||| ||| |||||||||||  ||||  ||||| |  |||||||||||||| 
Sbjct: 766 ttctttggctttcttctcactcctagcaaacgcagcacaaaccgtgcaagctcaccgtag 707

                                                                       
Query: 483 agcatcccagaccgatcaaaaagctgcaacatagctgtaatgaataaatagaaggcttgt 542
           ||||| || ||||| || || ||||||| ||| ||||| ||||| |||||| | || || 
Sbjct: 706 agcataccggaccggtcgaagagctgcagcattgctgtcatgaagaaataggatgcctga 647

                                                                    
Query: 543 gtgttttgttcaacgagaaatgcaactcgcccaaagaaactgacggcaccatgcatc 599
           ||||| |||||||| || ||||  | ||| || |||||| ||||  |||||||||||
Sbjct: 646 gtgttctgttcaacaaggaatgagattcgtccgaagaaattgacaacaccatgcatc 590
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>gb|BT017370.1| Zea mays clone EL01N0324H05.c mRNA sequence
          Length = 1450

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 459 acaaatctcgcaagctcaccgtaaagcatcccagaccgatca 500
           |||||||| ||||||||||| |||||||| |||| |||||||
Sbjct: 907 acaaatcttgcaagctcaccataaagcattccagcccgatca 866
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>gb|AY108942.1| Zea mays PCO138129 mRNA sequence
          Length = 1086

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 459 acaaatctcgcaagctcaccgtaaagcatcccagaccgatca 500
           |||||||| ||||||||||| |||||||| |||| |||||||
Sbjct: 573 acaaatcttgcaagctcaccataaagcattccagcccgatca 532
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>gb|DQ317318.1| Musa acuminata putative glycine-rich protein (GRP1) mRNA, partial
           cds
          Length = 658

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 459 acaaatctcgcaagctcaccgtaaagcatcccagaccgatcaaaaagctg 508
           |||||||| ||||||||||| || ||||| || || ||||||||||||||
Sbjct: 573 acaaatcttgcaagctcaccatatagcattcccgaacgatcaaaaagctg 524
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>gb|AC124185.3| Mus musculus BAC clone RP23-230F5 from 1, complete sequence
          Length = 195372

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 46     catacatacaaacaacaaaaata 68
              |||||||||||||||||||||||
Sbjct: 153427 catacatacaaacaacaaaaata 153449
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>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence
          Length = 256751

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 46    catacatacaaacaacaaaaata 68
             |||||||||||||||||||||||
Sbjct: 15816 catacatacaaacaacaaaaata 15794
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>gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome 1, complete sequence
          Length = 223534

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 46     catacatacaaacaacaaaaata 68
              |||||||||||||||||||||||
Sbjct: 185786 catacatacaaacaacaaaaata 185764
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>gb|AC100561.13| Mus musculus chromosome 1, clone RP23-154C4, complete sequence
          Length = 207939

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 46     catacatacaaacaacaaaaata 68
              |||||||||||||||||||||||
Sbjct: 171746 catacatacaaacaacaaaaata 171724
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>gb|AC163216.10| Mus musculus chromosome 1, clone RP23-69G5, complete sequence
          Length = 260188

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 46     catacatacaaacaacaaaaata 68
              |||||||||||||||||||||||
Sbjct: 253992 catacatacaaacaacaaaaata 253970
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>emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chromosome X, complete
             sequence
          Length = 148507

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 43    ccacatacatacaaacaacaaaa 65
             |||||||||||||||||||||||
Sbjct: 16481 ccacatacatacaaacaacaaaa 16459
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>emb|CT010426.3| Mouse DNA sequence from clone RP23-17A17 on chromosome 17, complete
              sequence
          Length = 221525

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 46     catacatacaaacaacaaaaat 67
              ||||||||||||||||||||||
Sbjct: 165889 catacatacaaacaacaaaaat 165868
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>gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, complete sequence
          Length = 196566

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 46    catacatacaaacaacaaaaat 67
             ||||||||||||||||||||||
Sbjct: 90702 catacatacaaacaacaaaaat 90681
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>gb|AC098818.3| Homo sapiens BAC clone RP11-109G23 from 4, complete sequence
          Length = 216451

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 639    aaaagattaagcatgtgttaaa 660
              ||||||||||||||||||||||
Sbjct: 105854 aaaagattaagcatgtgttaaa 105875
to top
>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence
          Length = 172348

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 43     ccacatacatacaaacaacaaaaat 67
              ||||||||||||||| |||||||||
Sbjct: 166660 ccacatacatacaaataacaaaaat 166684
to top
>gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, complete sequence
          Length = 167352

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 521   aatgaataaatagaaggcttg 541
             |||||||||||||||||||||
Sbjct: 42297 aatgaataaatagaaggcttg 42317
to top
>gb|AC119894.5| Mus musculus chromosome 10, clone RP24-225G11, complete sequence
          Length = 227319

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 43     ccacatacatacaaacaacaaaaat 67
              ||||||||||||||| |||||||||
Sbjct: 102136 ccacatacatacaaataacaaaaat 102160
to top
>gb|AC163903.4| Mus musculus BAC clone RP24-314J18 from chromosome 17, complete sequence
          Length = 197522

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 47     atacatacaaacaacaaaaat 67
              |||||||||||||||||||||
Sbjct: 124292 atacatacaaacaacaaaaat 124312
to top
>gb|AC139240.4| Mus musculus BAC clone RP24-128J14 from chromosome 18, complete
             sequence
          Length = 173054

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    atacatacaaacaacaaaaat 67
             |||||||||||||||||||||
Sbjct: 48012 atacatacaaacaacaaaaat 47992
to top
>gb|AC117214.3| Mus musculus BAC clone RP23-307B15 from chromosome 9, complete sequence
          Length = 219833

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 343    tgttgttggcttttggtgtct 363
              |||||||||||||||||||||
Sbjct: 148813 tgttgttggcttttggtgtct 148793
to top
>gb|AC109364.6| Mus musculus BAC clone RP23-127N24 from chromosome 17, complete sequence
          Length = 198838

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 47     atacatacaaacaacaaaaat 67
              |||||||||||||||||||||
Sbjct: 196341 atacatacaaacaacaaaaat 196321
to top
>gb|AC113598.8| Mus musculus chromosome 14, clone RP23-476N23, complete sequence
          Length = 214461

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 45     acatacatacaaacaacaaaa 65
              |||||||||||||||||||||
Sbjct: 112998 acatacatacaaacaacaaaa 112978
to top
>gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete sequence
          Length = 127836

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 3     ctccgttcttttcaagataac 23
             |||||||||||||||||||||
Sbjct: 79918 ctccgttcttttcaagataac 79898
to top
>gb|AC015983.7| Homo sapiens BAC clone RP11-560I19 from 7, complete sequence
          Length = 177476

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 521    aatgaataaatagaaggcttg 541
              |||||||||||||||||||||
Sbjct: 171964 aatgaataaatagaaggcttg 171984
to top
>ref|XM_728829.1| Plasmodium chabaudi chabaudi hypothetical protein (PC402742.00.0)
           partial mRNA
          Length = 634

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 618 tagttatgaagaattgttttcaaaa 642
           ||||||||||||||| |||||||||
Sbjct: 183 tagttatgaagaatttttttcaaaa 207
to top
>ref|XM_738506.1| Plasmodium chabaudi chabaudi hypothetical protein (PC103209.00.0)
           partial mRNA
          Length = 2018

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 618 tagttatgaagaattgttttcaaaa 642
           ||||||||||||||| |||||||||
Sbjct: 72  tagttatgaagaatttttttcaaaa 96
to top
>ref|XM_674757.1| Plasmodium berghei strain ANKA hypothetical protein (PB104901.00.0)
           partial mRNA
          Length = 1842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 618 tagttatgaagaattgttttcaaaa 642
           ||||||||||||||| |||||||||
Sbjct: 798 tagttatgaagaatttttttcaaaa 822
to top
>emb|BX855598.22| Zebrafish DNA sequence from clone DKEY-52J13 in linkage group 13,
             complete sequence
          Length = 209449

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 622   tatgaagaattgttttcaaaa 642
             |||||||||||||||||||||
Sbjct: 19595 tatgaagaattgttttcaaaa 19575
to top
>emb|AL606661.23| Mouse DNA sequence from clone RP23-355P23 on chromosome 11 Contains a
            ubiquitin C (Ubc) pseudogene, complete sequence
          Length = 91585

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 47   atacatacaaacaacaaaaat 67
            |||||||||||||||||||||
Sbjct: 4073 atacatacaaacaacaaaaat 4093
to top
>gb|AC154306.3| Mus musculus BAC clone RP23-376G3 from 17, complete sequence
          Length = 139522

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 43    ccacatacatacaaacaacaaaaat 67
             ||||| |||||||||||||||||||
Sbjct: 29530 ccacaaacatacaaacaacaaaaat 29506
to top
>emb|AL928574.7| Mouse DNA sequence from clone RP23-332L19 on chromosome 4, complete
              sequence
          Length = 114436

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 45     acatacatacaaacaacaaaaatac 69
              ||||||||||| |||||||||||||
Sbjct: 101214 acatacatacatacaacaaaaatac 101238
to top
>emb|AL807758.5| Mouse DNA sequence from clone RP23-469A1 on chromosome X, complete
             sequence
          Length = 169053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    atacatacaaacaacaaaaat 67
             |||||||||||||||||||||
Sbjct: 22721 atacatacaaacaacaaaaat 22741
to top
>gb|AC132350.4| Mus musculus BAC clone RP24-95A6 from chromosome 6, complete sequence
          Length = 177167

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 42    tccacatacatacaaacaacaaaa 65
             |||| |||||||||||||||||||
Sbjct: 33487 tccatatacatacaaacaacaaaa 33464
to top
>ref|XM_516456.1| PREDICTED: Pan troglodytes similar to hypothetical protein FLJ12800
            (LOC460366), mRNA
          Length = 1460

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1212 cttagtttccccaaacattg 1193
to top
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 127    attaagccatgaaaatcagaaaga 150
              |||||||||||| |||||||||||
Sbjct: 144965 attaagccatgagaatcagaaaga 144942
to top
>gb|AC122773.8| Mus musculus chromosome 1, clone RP24-160N7, complete sequence
          Length = 142124

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     ccacatacatacaaacaacaaaaa 66
              ||||||||| ||||||||||||||
Sbjct: 100791 ccacatacacacaaacaacaaaaa 100768
to top
>gb|AC111067.9| Mus musculus chromosome 1, clone RP24-483O2, complete sequence
          Length = 130269

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 43     ccacatacatacaaacaacaaaaa 66
              ||||||||| ||||||||||||||
Sbjct: 127501 ccacatacacacaaacaacaaaaa 127524
to top
>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence
          Length = 213736

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     atacatacaaacaacaaaaa 66
              ||||||||||||||||||||
Sbjct: 163338 atacatacaaacaacaaaaa 163357
to top
>gb|AC159993.10| Mus musculus chromosome 8, clone RP23-39P7, complete sequence
          Length = 211785

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     atacatacaaacaacaaaaa 66
              ||||||||||||||||||||
Sbjct: 155960 atacatacaaacaacaaaaa 155979
to top
>gb|AC126671.3| Mus musculus BAC clone RP24-472G2 from chromosome 16, complete sequence
          Length = 172980

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    acatacatacaaacaacaaa 64
             ||||||||||||||||||||
Sbjct: 84331 acatacatacaaacaacaaa 84312
to top
>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 40    cctccacatacatacaaacaacaaaaat 67
             |||||||||||| ||||||| |||||||
Sbjct: 23209 cctccacatacacacaaacagcaaaaat 23182
to top
>gb|AC108950.4| Mus musculus BAC clone RP23-458E21 from chromosome 9, complete sequence
          Length = 181083

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 344   gttgttggcttttggtgtct 363
             ||||||||||||||||||||
Sbjct: 27150 gttgttggcttttggtgtct 27131
to top
>gb|AC121919.3| Mus musculus BAC clone RP24-195I15 from chromosome 14, complete
             sequence
          Length = 146974

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    atacatacaaacaacaaaaa 66
             ||||||||||||||||||||
Sbjct: 31906 atacatacaaacaacaaaaa 31925
to top
>gb|AC146123.2| Pan troglodytes BAC clone RP43-38F11 from 7, complete sequence
          Length = 185971

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    ccatgagttgttgttggctt 354
              ||||||||||||||||||||
Sbjct: 101425 ccatgagttgttgttggctt 101406
to top
>gb|AC008163.2| Homo sapiens BAC clone RP11-5B9 from 7, complete sequence
          Length = 135300

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccatgagttgttgttggctt 354
             ||||||||||||||||||||
Sbjct: 27616 ccatgagttgttgttggctt 27597
to top
>emb|CR684362.2|CNS0FR06 Tetraodon nigroviridis full-length cDNA
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  ccagcaaagcaaactggcca 108
           ||||||||||||||||||||
Sbjct: 659 ccagcaaagcaaactggcca 678
to top
>emb|CR680666.2|CNS0FO5I Tetraodon nigroviridis full-length cDNA
          Length = 1178

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  ccagcaaagcaaactggcca 108
           ||||||||||||||||||||
Sbjct: 670 ccagcaaagcaaactggcca 689
to top
>emb|CR656466.2|CNS0F5I0 Tetraodon nigroviridis full-length cDNA
          Length = 1077

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  ccagcaaagcaaactggcca 108
           ||||||||||||||||||||
Sbjct: 605 ccagcaaagcaaactggcca 624
to top
>gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 186074

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     ccacatacatacaaacaacaaaaa 66
              ||||||||| ||||||||||||||
Sbjct: 179120 ccacatacacacaaacaacaaaaa 179097
to top
>gb|BC035516.1| Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
            MGC:34190 IMAGE:5229681), complete cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1544 cttagtttccccaaacattg 1525
to top
>gb|BC071960.1| Homo sapiens coiled-coil domain containing 71, mRNA (cDNA clone
           IMAGE:6598747), partial cds
          Length = 988

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 cttagtttccccaaacattg 332
           ||||||||||||||||||||
Sbjct: 734 cttagtttccccaaacattg 715
to top
>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an
             ADP-ribosylation factor pseudogene, complete sequence
          Length = 178914

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    tttcaagataacaggtacta 31
             ||||||||||||||||||||
Sbjct: 36380 tttcaagataacaggtacta 36399
to top
>gb|U56248.1|CBRG01D9 Caenorhabditis briggsae cosmid G01D9
          Length = 40031

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  tgaaaatcagaaagagcagc 155
            ||||||||||||||||||||
Sbjct: 9568 tgaaaatcagaaagagcagc 9549
to top
>emb|AL035476.7|PFMAL4P3 Plasmodium falciparum MAL4P3
          Length = 349751

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 11     ttttcaagataacaggtactattattta 38
              ||||||| |||||||||||||| |||||
Sbjct: 152249 ttttcaatataacaggtactataattta 152222
to top
>gb|AC113115.17| Mus musculus chromosome 7, clone RP23-338L5, complete sequence
          Length = 197397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    acatacaaacaacaaaaata 68
             ||||||||||||||||||||
Sbjct: 13734 acatacaaacaacaaaaata 13715
to top
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214578

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cctccacatacatacaaaca 59
             ||||||||||||||||||||
Sbjct: 99698 cctccacatacatacaaaca 99679
to top
>gb|BC079900.1| Mus musculus RIKEN cDNA 2610039C10 gene, mRNA (cDNA clone
           MGC:100039 IMAGE:30602551), complete cds
          Length = 1397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  acatacatacaaacaacaaa 64
           ||||||||||||||||||||
Sbjct: 927 acatacatacaaacaacaaa 908
to top
>emb|AJ632307.1| Cotesia congregata virus complete genome, segment Circle4
          Length = 15876

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   caacaaaaatacttcaataa 77
            ||||||||||||||||||||
Sbjct: 7863 caacaaaaatacttcaataa 7844
to top
>gb|AC160139.2| Mus musculus BAC clone RP23-93P8 from chromosome 9, complete sequence
          Length = 208009

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    acatacatacaaacaacaaaaata 68
             ||||||||||| ||||||||||||
Sbjct: 67973 acatacatacatacaacaaaaata 67950
to top
>gb|AC163712.3| Gallus gallus BAC clone CH261-29M9 from chromosome ul, complete sequence
          Length = 236367

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    gctttggcaatctttccttt 262
              ||||||||||||||||||||
Sbjct: 153433 gctttggcaatctttccttt 153414
to top
>emb|BX548074.9| Zebrafish DNA sequence from clone CH211-11F6 in linkage group 23,
             complete sequence
          Length = 167014

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    aaacaacaaaaatacttcaa 74
             ||||||||||||||||||||
Sbjct: 46160 aaacaacaaaaatacttcaa 46179
to top
>emb|BX324121.9| Zebrafish DNA sequence from clone DKEY-164J20 in linkage group 25,
              complete sequence
          Length = 181165

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 485    catcccagaccgatcaaaaagctg 508
              ||||||||| ||||||||||||||
Sbjct: 152503 catcccagatcgatcaaaaagctg 152480
to top
>emb|CR617305.1| full-length cDNA clone CS0DC015YD15 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 1462

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1271 cttagtttccccaaacattg 1252
to top
>emb|CR610877.1| full-length cDNA clone CS0DI041YC15 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1743

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1535 cttagtttccccaaacattg 1516
to top
>emb|CR608073.1| full-length cDNA clone CS0DL002YD03 of B cells (Ramos cell line) Cot
            25-normalized of Homo sapiens (human)
          Length = 1761

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1553 cttagtttccccaaacattg 1534
to top
>emb|CR608045.1| full-length cDNA clone CS0DJ001YB01 of T cells (Jurkat cell line) Cot
            10-normalized of Homo sapiens (human)
          Length = 1718

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1525 cttagtttccccaaacattg 1506
to top
>dbj|AK023691.1| Homo sapiens cDNA FLJ13629 fis, clone PLACE1011056, weakly similar
           to HISTONE H1, GONADAL
          Length = 2511

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 cttagtttccccaaacattg 332
           ||||||||||||||||||||
Sbjct: 830 cttagtttccccaaacattg 811
to top
>dbj|AK022862.1| Homo sapiens cDNA FLJ12800 fis, clone NT2RP2002079, weakly similar to
            HISTONE H1, GONADAL
          Length = 1782

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1546 cttagtttccccaaacattg 1527
to top
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 250218

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    cctccacatacatacaaaca 59
             ||||||||||||||||||||
Sbjct: 28353 cctccacatacatacaaaca 28334
to top
>gb|AC165369.3| Gallus gallus BAC clone CH261-58G18 from chromosome ul, complete
             sequence
          Length = 208903

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 243   gctttggcaatctttccttt 262
             ||||||||||||||||||||
Sbjct: 29729 gctttggcaatctttccttt 29710
to top
>dbj|AK163310.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020013B09 product:hypothetical protein, full
           insert sequence
          Length = 1326

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  acatacatacaaacaacaaa 64
           ||||||||||||||||||||
Sbjct: 949 acatacatacaaacaacaaa 930
to top
>gb|AC022916.11| Homo sapiens chromosome 17, clone RP11-799D4, complete sequence
          Length = 215786

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 364    caaaaagctgctggccaggt 383
              ||||||||||||||||||||
Sbjct: 132943 caaaaagctgctggccaggt 132962
to top
>ref|NM_022903.2| Homo sapiens coiled-coil domain containing 71 (CCDC71), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1544 cttagtttccccaaacattg 1525
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>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    tgtaatgaataaatagaagg 537
              ||||||||||||||||||||
Sbjct: 983309 tgtaatgaataaatagaagg 983328
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>dbj|AK014084.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched
           library, clone:3110025H23 product:hypothetical protein,
           full insert sequence
          Length = 1257

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  acatacatacaaacaacaaa 64
           ||||||||||||||||||||
Sbjct: 885 acatacatacaaacaacaaa 866
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>emb|CR391700.1| Gallus gallus finished cDNA, clone ChEST180c17
          Length = 835

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 gctttggcaatctttccttt 262
           ||||||||||||||||||||
Sbjct: 678 gctttggcaatctttccttt 697
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>gb|AC160759.4| Mus musculus BAC clone RP23-333K15 from chromosome 16, complete sequence
          Length = 190127

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 45     acatacatacaaacaacaaa 64
              ||||||||||||||||||||
Sbjct: 176930 acatacatacaaacaacaaa 176949
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>gb|AC158543.2| Mus musculus BAC clone RP23-425C23 from chromosome 13, complete
             sequence
          Length = 201777

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    atacatacaaacaacaaaaa 66
             ||||||||||||||||||||
Sbjct: 22500 atacatacaaacaacaaaaa 22519
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>gb|AC159193.2| Mus musculus BAC clone RP24-68E20 from chromosome 12, complete sequence
          Length = 243976

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 535   aggcttgtgtgttttgttca 554
             ||||||||||||||||||||
Sbjct: 59193 aggcttgtgtgttttgttca 59212
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>gb|AC135506.3| Homo sapiens chromosome 3 clone RP11-694I15, complete sequence
          Length = 174363

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   cttagtttccccaaacattg 332
             ||||||||||||||||||||
Sbjct: 93073 cttagtttccccaaacattg 93092
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>dbj|AK012762.2| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2810018N07 product:RIKEN cDNA
            2610039C10 gene, full insert sequence
          Length = 2609

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   acatacatacaaacaacaaa 64
            ||||||||||||||||||||
Sbjct: 2225 acatacatacaaacaacaaa 2206
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>dbj|AK012533.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2700078I24 product:RIKEN cDNA
           2610039C10 gene, full insert sequence
          Length = 1301

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  acatacatacaaacaacaaa 64
           ||||||||||||||||||||
Sbjct: 916 acatacatacaaacaacaaa 897
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>dbj|AK011719.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2610039C10 product:RIKEN cDNA
           2610039C10 gene, full insert sequence
          Length = 1138

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  acatacatacaaacaacaaa 64
           ||||||||||||||||||||
Sbjct: 765 acatacatacaaacaacaaa 746
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>gb|AC116820.11| Mus musculus chromosome 7, clone RP24-358B4, complete sequence
          Length = 152733

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    acatacaaacaacaaaaata 68
             ||||||||||||||||||||
Sbjct: 26701 acatacaaacaacaaaaata 26720
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>gb|AC160249.6| Mus musculus 10 BAC RP24-363B22 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 156854

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    acatacatacaaacaacaaaaata 68
             ||||||| ||||||||||||||||
Sbjct: 64241 acatacacacaaacaacaaaaata 64218
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 127      attaagccatgaaaatcagaaaga 150
                |||||||||||| |||||||||||
Sbjct: 28186402 attaagccatgagaatcagaaaga 28186379
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>gb|AC154541.2| Mus musculus BAC clone RP23-458N20 from chromosome 13, complete sequence
          Length = 174991

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     atacatacaaacaacaaaaa 66
              ||||||||||||||||||||
Sbjct: 108665 atacatacaaacaacaaaaa 108646
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>gb|AC154702.2| Mus musculus BAC clone RP24-348D9 from chromosome 13, complete sequence
          Length = 157775

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    atacatacaaacaacaaaaa 66
             ||||||||||||||||||||
Sbjct: 96461 atacatacaaacaacaaaaa 96480
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>gb|AC079244.29| Mus musculus strain C57BL/6J chromosome 9 clone rp23-343k17, complete
              sequence
          Length = 223861

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    gttgttggcttttggtgtct 363
              ||||||||||||||||||||
Sbjct: 170977 gttgttggcttttggtgtct 170958
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>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
             sequence
          Length = 223392

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 43    ccacatacatacaaacaacaaaaa 66
             ||||||||| ||||||||||||||
Sbjct: 22122 ccacatacacacaaacaacaaaaa 22145
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>dbj|AK098658.1| Homo sapiens cDNA FLJ25792 fis, clone TST06958
          Length = 1657

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 313  cttagtttccccaaacattg 332
            ||||||||||||||||||||
Sbjct: 1410 cttagtttccccaaacattg 1391
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>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence
          Length = 190900

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 40     cctccacatacatacaaacaacaaaaat 67
              |||||||||||| ||||||| |||||||
Sbjct: 122345 cctccacatacacacaaacagcaaaaat 122372
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 127      attaagccatgaaaatcagaaaga 150
                |||||||||||| |||||||||||
Sbjct: 28171280 attaagccatgagaatcagaaaga 28171257
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>ref|NM_025642.1| Mus musculus RIKEN cDNA 2610039C10 gene (2610039C10Rik), mRNA
          Length = 1300

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 45  acatacatacaaacaacaaa 64
           ||||||||||||||||||||
Sbjct: 915 acatacatacaaacaacaaa 896
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>emb|AL928959.9| Mouse DNA sequence from clone RP23-73I19 on chromosome 2, complete
             sequence
          Length = 143937

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tacatacaaacaacaaaaat 67
             ||||||||||||||||||||
Sbjct: 90024 tacatacaaacaacaaaaat 90005
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>gb|AC136457.3| Mus musculus BAC clone RP23-76G19 from chromosome 13, complete sequence
          Length = 204369

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 52    tacaaacaacaaaaatacttcaataaca 79
             |||| ||||||||||||| |||||||||
Sbjct: 17870 tacatacaacaaaaatacctcaataaca 17843
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>gb|AC169519.4| Mus musculus chromosome 5, clone wi1-2285D16, complete sequence
          Length = 40386

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   ctccacatacatacaaacaa 60
            ||||||||||||||||||||
Sbjct: 2647 ctccacatacatacaaacaa 2666
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>gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, complete sequence
          Length = 140911

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   ctccacatacatacaaacaa 60
            ||||||||||||||||||||
Sbjct: 6481 ctccacatacatacaaacaa 6462
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>emb|AL645567.7| Mouse DNA sequence from clone RP23-181A7 on chromosome X, complete
            sequence
          Length = 111339

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 44   cacatacatacaaacaacaa 63
            ||||||||||||||||||||
Sbjct: 6380 cacatacatacaaacaacaa 6361
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>emb|AL669848.12| Mouse DNA sequence from clone RP23-209F17 on chromosome X, complete
             sequence
          Length = 114708

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    cacatacatacaaacaacaa 63
             ||||||||||||||||||||
Sbjct: 75012 cacatacatacaaacaacaa 74993


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,433,134
Number of Sequences: 3902068
Number of extensions: 8433134
Number of successful extensions: 155753
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 155370
Number of HSP's gapped (non-prelim): 379
length of query: 678
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 655
effective length of database: 17,143,297,704
effective search space: 11228859996120
effective search space used: 11228859996120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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