>NPS12_ARATH (Q9LNH6) Novel plant SNARE 12 (AtNPSN12)|
          Length = 265

 Score =  172 bits (435), Expect(2) = 2e-43
 Identities = 92/134 (68%), Positives = 108/134 (80%)
 Frame = -2

Query: 655 QMASEMSNQQLIDSGVRQMDQTDQAIERSKMVVAQTVEVGXXXXXXXXXXXXQMKRIGNE 476
           QMAS MSNQ+L+D+G+++MD+TDQAIERSK VV QT+EVG            QM R+ N+
Sbjct: 131 QMASTMSNQELVDAGMKRMDETDQAIERSKQVVHQTLEVGTQTASNLKGQTDQMGRVVND 190

Query: 475 LDSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNKSIPDIPG 296
           LD++ FSLKKASQ+VKEIGRQVATDKCIMAFLFLIVCGVIAII+VKIVNP+NK I DIPG
Sbjct: 191 LDTIQFSLKKASQLVKEIGRQVATDKCIMAFLFLIVCGVIAIIIVKIVNPNNKDIRDIPG 250

Query: 295 LXXXXXXAQNRKLL 254
           L      AQ+RKLL
Sbjct: 251 L---APPAQSRKLL 261



 Score = 23.9 bits (50), Expect(2) = 2e-43
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 4/23 (17%)
 Frame = -1

Query: 713 NKRIELFDAG----NDQVAEDNV 657
           NK++ELFD G     +  AE+NV
Sbjct: 108 NKKVELFDTGAGVSGEPTAEENV 130

>NPS13_ARATH (Q9LRP1) Novel plant SNARE 13 (AtNPSN13)|
          Length = 269

 Score =  167 bits (424), Expect(2) = 5e-42
 Identities = 88/134 (65%), Positives = 106/134 (79%)
 Frame = -2

Query: 655 QMASEMSNQQLIDSGVRQMDQTDQAIERSKMVVAQTVEVGXXXXXXXXXXXXQMKRIGNE 476
           Q+AS MSNQ+L+D+G+++MD+TDQAIERSK VV QT+EVG            QM R+ N 
Sbjct: 131 QVASSMSNQELVDAGMKRMDETDQAIERSKQVVEQTLEVGTQTAANLKGQTDQMGRVVNH 190

Query: 475 LDSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNKSIPDIPG 296
           LD++ FS+KKASQ+VKEIGRQVATDKCIM FLFLIVCGV+AII+VKIVNP+NK I DIPG
Sbjct: 191 LDTIQFSIKKASQLVKEIGRQVATDKCIMGFLFLIVCGVVAIIIVKIVNPNNKDIRDIPG 250

Query: 295 LXXXXXXAQNRKLL 254
           L      AQ+RKLL
Sbjct: 251 L---APPAQSRKLL 261



 Score = 23.5 bits (49), Expect(2) = 5e-42
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 4/23 (17%)
 Frame = -1

Query: 713 NKRIELFDAG----NDQVAEDNV 657
           NK++ELFD G     +  AE+NV
Sbjct: 108 NKKVELFDMGAGVSGEPTAEENV 130

>NPS11_ARATH (Q944A9) Novel plant SNARE 11 (AtNPSN11)|
          Length = 265

 Score =  158 bits (400), Expect(2) = 1e-39
 Identities = 85/133 (63%), Positives = 99/133 (74%)
 Frame = -2

Query: 652 MASEMSNQQLIDSGVRQMDQTDQAIERSKMVVAQTVEVGXXXXXXXXXXXXQMKRIGNEL 473
           +AS MSNQ+L+D G   MD TDQAIER K +V +T+ VG            QM R+ NEL
Sbjct: 130 LASNMSNQELMDKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKPQTEQMSRVVNEL 189

Query: 472 DSVHFSLKKASQMVKEIGRQVATDKCIMAFLFLIVCGVIAIIVVKIVNPHNKSIPDIPGL 293
           DS+HFSLKKAS++VKEIGRQVATDKCIMAFLFLIV GVIAII+VKIVNP+NK I DIPG+
Sbjct: 190 DSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNKDIRDIPGV 249

Query: 292 XXXXXXAQNRKLL 254
                 A NR+LL
Sbjct: 250 -GLAPPAMNRRLL 261



 Score = 24.6 bits (52), Expect(2) = 1e-39
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 713 NKRIELFDAGNDQVAEDNV 657
           NKR++LFD   ++  E+NV
Sbjct: 110 NKRVDLFDGPGEEHMEENV 128

>VTI12_ARATH (Q9SEL5) Vesicle transport v-SNARE 12 (AtVTI12) (Vesicle transport|
           v-SNARE protein VTI1b) (Vesicle soluble NSF attachment
           protein receptor VTI1b) (AtVTI1b)
          Length = 222

 Score = 36.2 bits (82), Expect = 0.10
 Identities = 22/90 (24%), Positives = 46/90 (51%)
 Frame = -2

Query: 610 VRQMDQTDQAIERSKMVVAQTVEVGXXXXXXXXXXXXQMKRIGNELDSVHFSLKKASQMV 431
           V ++DQ+   I  S+ ++ +T EVG             +    N+L  V  ++ K+ +++
Sbjct: 128 VERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKLHGVDDAIDKSKKVL 187

Query: 430 KEIGRQVATDKCIMAFLFLIVCGVIAIIVV 341
             + R++  +K I+    +IV  V+AII++
Sbjct: 188 TAMSRRMTRNKWIIT--SVIVALVLAIILI 215

>LRC56_HUMAN (Q8IYG6) Leucine-rich repeat-containing protein 56|
          Length = 542

 Score = 33.5 bits (75), Expect = 0.66
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = -1

Query: 350 HCCQDRQPA*QKHTRHPGTGTSCTSCAEPETAFHRCFPNALNIRKWKSRAVQ 195
           H CQ R+P  Q     PG   + TS  EP+ A    F     +R W+   V+
Sbjct: 343 HQCQAREPPEQLPQHRPGDPAASTSTPEPDPADSSDFLALAGLRAWREHGVR 394

>LRP8_MOUSE (Q924X6) Low-density lipoprotein receptor-related protein 8|
           precursor (Apolipoprotein E receptor 2)
          Length = 996

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 25/101 (24%), Positives = 33/101 (32%), Gaps = 10/101 (9%)
 Frame = -1

Query: 389 GISILDSLWCDCHHCCQDRQPA*QKHTRHPGTGTSCTSCAEPETAFHRCFPNALNIRKW- 213
           G  I +   CD    C+DR     +     G GT+ T  A   TA   C         W 
Sbjct: 211 GTCIPERWVCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTCRSGECIHLGWR 270

Query: 212 ---------KSRAVQVSLAEAKTHDVNCSIGACLYIIPVCN 117
                    KS     S    + ++  C  G C+  I  CN
Sbjct: 271 CDGDRDCKDKSDEADCSPGPCRENEFQCGDGTCVLAIKRCN 311

>TPM_LEPSA (Q8T380) Tropomyosin|
          Length = 284

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -2

Query: 496 MKRIGNELDSVHFSLKKASQMVKEIGRQVAT 404
           +K +GN L S+  S +KA+Q V+E  RQ+ T
Sbjct: 197 LKVVGNSLKSLEVSEEKANQRVEEYKRQIKT 227

>NID2_MOUSE (O88322) Nidogen-2 precursor (NID-2) (Entactin-2)|
          Length = 1403

 Score = 30.0 bits (66), Expect = 7.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 299 GTGTSCTSCAEPETAFHRCFPNAL 228
           G G SC    E  T FHRC PN++
Sbjct: 817 GDGRSCVDVNECATGFHRCGPNSV 840


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,652,869
Number of Sequences: 219361
Number of extensions: 1749806
Number of successful extensions: 4049
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4048
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7252940416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)