ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14f15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479609.1| Oryza sativa (japonica cultivar-group), mRNA 143 9e-31
2dbj|AK099674.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
3dbj|AK062111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 5e-26
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
5dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
6gb|AE013057.1| Thermoanaerobacter tengcongensis MB4, section 84 ... 42 2.4
7emb|AL953849.10| Mouse DNA sequence from clone RP23-384G9 on chr... 42 2.4
8gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome... 42 2.4
9ref|XM_420052.1| PREDICTED: Gallus gallus similar to MGC68696 pr... 40 9.6
10ref|XM_381885.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 9.6
11gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosom... 40 9.6
12gb|AC124389.4| Mus musculus BAC clone RP24-429G21 from chromosom... 40 9.6
13emb|AL589791.4| Human DNA sequence from clone RP11-505P2 on chro... 40 9.6
14gb|AC110761.3| Homo sapiens BAC clone RP11-45C13 from 4, complet... 40 9.6
15gb|AC112236.3| Homo sapiens BAC clone RP11-308D13 from 4, comple... 40 9.6
16gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, comple... 40 9.6
17gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 9.6
18gb|U84248.2|AAU84248 Aedes aegypti blood meal-induced protein (M... 40 9.6
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
20gb|AC009981.6|AC009981 Drosophila melanogaster, chromosome 3R, r... 40 9.6
21gb|AC008215.5|AC008215 Drosophila melanogaster, chromosome 3R, r... 40 9.6
22ref|XM_233761.3| PREDICTED: Rattus norvegicus IBR domain contain... 40 9.6
23dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.6
24gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95... 40 9.6
25gb|AC005691.1|AC005691 Homo sapiens chromosome 17, clone hRPK.2... 40 9.6
26gb|AF018435.1|ACADL3 Mus musculus long-chain acyl-CoA dehydrogen... 40 9.6
27gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complet... 40 9.6
28gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 40 9.6
29gb|M63543.1|HUMHDAD Human cosmid HDAD (8C10E13) DNA 40 9.6
30gb|M63544.1|HUMHDABCD Human DNA sequence of contig comprising 3 ... 40 9.6 
>ref|XM_479609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3465

 Score =  143 bits (72), Expect = 9e-31
 Identities = 303/380 (79%)
 Strand = Plus / Minus

                                                                        
Query: 308  atgtgactgacaacatcaccgacgaatgagttgaagcatgacgagcagatagttctcatg 367
            |||| |||||| ||| |||| || || |||||||||||||| ||||||   |||||||||
Sbjct: 3302 atgtaactgacgacaccaccaacaaaggagttgaagcatgatgagcagcaggttctcatg 3243

                                                                        
Query: 368  agaaacgctggctctcggccgtcacaggcatggcaacaatggctaggaaaaggaaaaggt 427
            ||||| ||||| ||  | || ||||||||||||  |||||||||||| | ||||  ||| 
Sbjct: 3242 agaaatgctggttcctgaccatcacaggcatggttacaatggctagggagaggatgaggc 3183

                                                                        
Query: 428  gttgcaacaaccctatccttgttgtgcgcaatcccggacaacgctaagatggtgtgtgtc 487
            ||    |||||   ||||| |||||| |||||||| ||||  |||||||| |||||||| 
Sbjct: 3182 gtactgacaacaaaatcctcgttgtgtgcaatcccagacagtgctaagatagtgtgtgtt 3123

                                                                        
Query: 488  gctcgccgtgctacgttcgtgaaagaagattgatccaatggggaccgggcacaaatgtgc 547
            |||| |||||| || ||| |||||  ||||||| ||||||||||| | ||||| ||  | 
Sbjct: 3122 gctctccgtgcaacattcttgaaatcagattgacccaatggggactgagcacacattagt 3063

                                                                        
Query: 548  ttgatgctcttcttgacaataggaatcagctggtccttggcatttgctacttctcggaaa 607
            |||| | || |||||||||||||||||||||| ||||| |||  | ||  || | |||||
Sbjct: 3062 ttgaggttcctcttgacaataggaatcagctgttccttagcaccttctgtttgttggaaa 3003

                                                                        
Query: 608  ttgcttccaccctcatcagtgcattgattaagattacttgcagactgaacaaattgtgag 667
            |||||||||||| |||  |||| || | |||||   ||||| | |||||||||   ||||
Sbjct: 3002 ttgcttccacccccataggtgcgttcaataagaccccttgctggctgaacaaaagatgag 2943

                                
Query: 668  ctactctgctggctctgcat 687
            |||||||||||| |||||||
Sbjct: 2942 ctactctgctggttctgcat 2923



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 199  gtataatctttccaactgtctataattgaaagaatgacaccaat 242
            |||||||||||  | |||| ||||||||||||||||||| ||||
Sbjct: 3404 gtataatcttttgatctgtttataattgaaagaatgacaacaat 3361
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>dbj|AK099674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069F21, full
            insert sequence
          Length = 3465

 Score =  127 bits (64), Expect = 5e-26
 Identities = 301/380 (79%)
 Strand = Plus / Minus

                                                                        
Query: 308  atgtgactgacaacatcaccgacgaatgagttgaagcatgacgagcagatagttctcatg 367
            |||| |||||| ||| |||| || || |||||||||||||| ||||||   |||||||||
Sbjct: 3302 atgtaactgacgacaccaccaacaaaggagttgaagcatgatgagcagcaggttctcatg 3243

                                                                        
Query: 368  agaaacgctggctctcggccgtcacaggcatggcaacaatggctaggaaaaggaaaaggt 427
            ||||| ||||| ||  | || ||||||||||||  |||||||||||| | ||||  ||| 
Sbjct: 3242 agaaatgctggttcctgaccatcacaggcatggttacaatggctagggagaggatgaggc 3183

                                                                        
Query: 428  gttgcaacaaccctatccttgttgtgcgcaatcccggacaacgctaagatggtgtgtgtc 487
            ||    |||||   ||||| |||||| |||||||| ||||  |||||||| |||||||| 
Sbjct: 3182 gtactgacaacaaaatcctcgttgtgtgcaatcccagacagtgctaagatagtgtgtgtt 3123

                                                                        
Query: 488  gctcgccgtgctacgttcgtgaaagaagattgatccaatggggaccgggcacaaatgtgc 547
            |||| |||||| || ||| |||||  ||||||| |||||| |||| | | ||| ||  | 
Sbjct: 3122 gctctccgtgcaacattcttgaaatcagattgacccaatgcggactgagtacacattagt 3063

                                                                        
Query: 548  ttgatgctcttcttgacaataggaatcagctggtccttggcatttgctacttctcggaaa 607
            |||| | || |||||||||||||||||||||| ||||| |||  | ||  || | |||||
Sbjct: 3062 ttgaggttcctcttgacaataggaatcagctgttccttagcaccttctgtttgttggaaa 3003

                                                                        
Query: 608  ttgcttccaccctcatcagtgcattgattaagattacttgcagactgaacaaattgtgag 667
            |||||||||||| |||  |||| || | |||||   ||||| | |||||||||   ||||
Sbjct: 3002 ttgcttccacccccataggtgcgttcaataagaccccttgctggctgaacaaaagatgag 2943

                                
Query: 668  ctactctgctggctctgcat 687
            |||||||||||| |||||||
Sbjct: 2942 ctactctgctggttctgcat 2923



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 199  gtataatctttccaactgtctataattgaaagaatgacaccaat 242
            |||||||||||  | |||| ||||||||||||||||||| ||||
Sbjct: 3404 gtataatcttttgatctgtttataattgaaagaatgacaacaat 3361
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>dbj|AK062111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B09, full
           insert sequence
          Length = 499

 Score =  127 bits (64), Expect = 5e-26
 Identities = 250/312 (80%)
 Strand = Plus / Minus

                                                                       
Query: 308 atgtgactgacaacatcaccgacgaatgagttgaagcatgacgagcagatagttctcatg 367
           |||| |||||| ||| |||| || || |||||||||||||| ||||||   |||||||||
Sbjct: 324 atgtaactgacgacaccaccaacaaaggagttgaagcatgatgagcagcaggttctcatg 265

                                                                       
Query: 368 agaaacgctggctctcggccgtcacaggcatggcaacaatggctaggaaaaggaaaaggt 427
           ||||| ||||| ||  | || ||||||||||||  |||||||||||| | ||||  ||| 
Sbjct: 264 agaaatgctggttcctgaccatcacaggcatggttacaatggctagggagaggatgaggc 205

                                                                       
Query: 428 gttgcaacaaccctatccttgttgtgcgcaatcccggacaacgctaagatggtgtgtgtc 487
           ||    |||||   ||||| |||||| |||||||| ||||  |||||||| |||||||| 
Sbjct: 204 gtactgacaacaaaatcctcgttgtgtgcaatcccagacagtgctaagatagtgtgtgtt 145

                                                                       
Query: 488 gctcgccgtgctacgttcgtgaaagaagattgatccaatggggaccgggcacaaatgtgc 547
           |||| |||||| || ||| |||||  ||||||| ||||||||||| | ||||| ||  | 
Sbjct: 144 gctctccgtgcaacattcttgaaatcagattgacccaatggggactgagcacacattagt 85

                                                                       
Query: 548 ttgatgctcttcttgacaataggaatcagctggtccttggcatttgctacttctcggaaa 607
           |||| | || |||||||||||||||||||||| ||||| |||  | ||  || | |||||
Sbjct: 84  ttgaggttcctcttgacaataggaatcagctgttccttagcaccttctgtttgttggaaa 25

                       
Query: 608 ttgcttccaccc 619
           ||||||||||||
Sbjct: 24  ttgcttccaccc 13



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 199 gtataatctttccaactgtctataattgaaagaatgacaccaat 242
           |||||||||||  | |||| ||||||||||||||||||| ||||
Sbjct: 426 gtataatcttttgatctgtttataattgaaagaatgacaacaat 383
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 170/213 (79%)
 Strand = Plus / Plus

                                                                            
Query: 308      atgtgactgacaacatcaccgacgaatgagttgaagcatgacgagcagatagttctcatg 367
                |||| |||||| ||| |||| || || |||||||||||||| ||||||   |||||||||
Sbjct: 29299658 atgtaactgacgacaccaccaacaaaggagttgaagcatgatgagcagcaggttctcatg 29299717

                                                                            
Query: 368      agaaacgctggctctcggccgtcacaggcatggcaacaatggctaggaaaaggaaaaggt 427
                ||||| ||||| ||  | || ||||||||||||  |||||||||||| | ||||  ||| 
Sbjct: 29299718 agaaatgctggttcctgaccatcacaggcatggttacaatggctagggagaggatgaggc 29299777

                                                                            
Query: 428      gttgcaacaaccctatccttgttgtgcgcaatcccggacaacgctaagatggtgtgtgtc 487
                ||    |||||   ||||| |||||| |||||||| ||||  |||||||| |||||||| 
Sbjct: 29299778 gtactgacaacaaaatcctcgttgtgtgcaatcccagacagtgctaagatagtgtgtgtt 29299837

                                                 
Query: 488      gctcgccgtgctacgttcgtgaaagaagattga 520
                |||| |||||| || ||| |||||  |||||||
Sbjct: 29299838 gctctccgtgcaacattcttgaaatcagattga 29299870



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 133/166 (80%)
 Strand = Plus / Plus

                                                                            
Query: 522      ccaatggggaccgggcacaaatgtgcttgatgctcttcttgacaataggaatcagctggt 581
                ||||||||||| | ||||| ||  | |||| | || |||||||||||||||||||||| |
Sbjct: 29300487 ccaatggggactgagcacacattagtttgaggttcctcttgacaataggaatcagctgtt 29300546

                                                                            
Query: 582      ccttggcatttgctacttctcggaaattgcttccaccctcatcagtgcattgattaagat 641
                |||| |||  | ||  || | ||||||||||||||||| |||  |||| || | ||||| 
Sbjct: 29300547 ccttagcaccttctgtttgttggaaattgcttccacccccataggtgcgttcaataagac 29300606

                                                              
Query: 642      tacttgcagactgaacaaattgtgagctactctgctggctctgcat 687
                  ||||| | |||||||||   |||||||||||||||| |||||||
Sbjct: 29300607 cccttgctggctgaacaaaagatgagctactctgctggttctgcat 29300652



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 199      gtataatctttccaactgtctataattgaaagaatgacaccaat 242
                |||||||||||  | |||| ||||||||||||||||||| ||||
Sbjct: 29299556 gtataatcttttgatctgtttataattgaaagaatgacaacaat 29299599
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>dbj|AP004316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0597G07
          Length = 152928

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 170/213 (79%)
 Strand = Plus / Plus

                                                                         
Query: 308   atgtgactgacaacatcaccgacgaatgagttgaagcatgacgagcagatagttctcatg 367
             |||| |||||| ||| |||| || || |||||||||||||| ||||||   |||||||||
Sbjct: 88347 atgtaactgacgacaccaccaacaaaggagttgaagcatgatgagcagcaggttctcatg 88406

                                                                         
Query: 368   agaaacgctggctctcggccgtcacaggcatggcaacaatggctaggaaaaggaaaaggt 427
             ||||| ||||| ||  | || ||||||||||||  |||||||||||| | ||||  ||| 
Sbjct: 88407 agaaatgctggttcctgaccatcacaggcatggttacaatggctagggagaggatgaggc 88466

                                                                         
Query: 428   gttgcaacaaccctatccttgttgtgcgcaatcccggacaacgctaagatggtgtgtgtc 487
             ||    |||||   ||||| |||||| |||||||| ||||  |||||||| |||||||| 
Sbjct: 88467 gtactgacaacaaaatcctcgttgtgtgcaatcccagacagtgctaagatagtgtgtgtt 88526

                                              
Query: 488   gctcgccgtgctacgttcgtgaaagaagattga 520
             |||| |||||| || ||| |||||  |||||||
Sbjct: 88527 gctctccgtgcaacattcttgaaatcagattga 88559



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 133/166 (80%)
 Strand = Plus / Plus

                                                                         
Query: 522   ccaatggggaccgggcacaaatgtgcttgatgctcttcttgacaataggaatcagctggt 581
             ||||||||||| | ||||| ||  | |||| | || |||||||||||||||||||||| |
Sbjct: 89176 ccaatggggactgagcacacattagtttgaggttcctcttgacaataggaatcagctgtt 89235

                                                                         
Query: 582   ccttggcatttgctacttctcggaaattgcttccaccctcatcagtgcattgattaagat 641
             |||| |||  | ||  || | ||||||||||||||||| |||  |||| || | ||||| 
Sbjct: 89236 ccttagcaccttctgtttgttggaaattgcttccacccccataggtgcgttcaataagac 89295

                                                           
Query: 642   tacttgcagactgaacaaattgtgagctactctgctggctctgcat 687
               ||||| | |||||||||   |||||||||||||||| |||||||
Sbjct: 89296 cccttgctggctgaacaaaagatgagctactctgctggttctgcat 89341



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 199   gtataatctttccaactgtctataattgaaagaatgacaccaat 242
             |||||||||||  | |||| ||||||||||||||||||| ||||
Sbjct: 88245 gtataatcttttgatctgtttataattgaaagaatgacaacaat 88288
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>gb|AE013057.1| Thermoanaerobacter tengcongensis MB4, section 84 of 244 of the complete
             genome
          Length = 14939

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 546   gcttgatgctcttcttgacaa 566
             |||||||||||||||||||||
Sbjct: 11736 gcttgatgctcttcttgacaa 11756
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>emb|AL953849.10| Mouse DNA sequence from clone RP23-384G9 on chromosome 2, complete
             sequence
          Length = 38989

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 576   gctggtccttggcatttgcta 596
             |||||||||||||||||||||
Sbjct: 22123 gctggtccttggcatttgcta 22143
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>gb|AC163634.4| Mus musculus BAC clone RP23-152O2 from chromosome 12, complete sequence
          Length = 199499

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 641    ttacttgcagactgaacaaattgtg 665
              |||||||||||| ||||||||||||
Sbjct: 132484 ttacttgcagacagaacaaattgtg 132508
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>ref|XM_420052.1| PREDICTED: Gallus gallus similar to MGC68696 protein (LOC422046),
           mRNA
          Length = 1722

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aggaaaaggaaaaggtgttg 431
           ||||||||||||||||||||
Sbjct: 330 aggaaaaggaaaaggtgttg 349
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>ref|XM_381885.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01709.1)
            partial mRNA
          Length = 3045

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 562  gacaataggaatcagctggt 581
            ||||||||||||||||||||
Sbjct: 2512 gacaataggaatcagctggt 2531
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>gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosome 5, complete sequence
          Length = 168528

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   ctcaattaagaagttagttccaag 131
             |||||||||||||||||| |||||
Sbjct: 87396 ctcaattaagaagttagtgccaag 87419
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>gb|AC124389.4| Mus musculus BAC clone RP24-429G21 from chromosome 1, complete sequence
          Length = 183428

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 573   tcagctggtccttggcattt 592
             ||||||||||||||||||||
Sbjct: 96876 tcagctggtccttggcattt 96895
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>emb|AL589791.4| Human DNA sequence from clone RP11-505P2 on chromosome 13, complete
              sequence
          Length = 161474

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 107    actcaattaagaagttagtt 126
              ||||||||||||||||||||
Sbjct: 156771 actcaattaagaagttagtt 156790
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>gb|AC110761.3| Homo sapiens BAC clone RP11-45C13 from 4, complete sequence
          Length = 153458

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    actgtaagacaagagatcat 43
             ||||||||||||||||||||
Sbjct: 62576 actgtaagacaagagatcat 62595
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>gb|AC112236.3| Homo sapiens BAC clone RP11-308D13 from 4, complete sequence
          Length = 160615

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   gctcttcttgacaataggaa 572
             ||||||||||||||||||||
Sbjct: 51582 gctcttcttgacaataggaa 51563
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>gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, complete sequence
          Length = 189223

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    gtgccccccttctcaggaag 65
             ||||||||||||||||||||
Sbjct: 53300 gtgccccccttctcaggaag 53281
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 391    acaggcatggcaacaatggc 410
              ||||||||||||||||||||
Sbjct: 582370 acaggcatggcaacaatggc 582389
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>gb|U84248.2|AAU84248 Aedes aegypti blood meal-induced protein (MRRG) mRNA, complete cds
          Length = 3307

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 672  tctgctggctctgcatgaaa 691
            ||||||||||||||||||||
Sbjct: 1340 tctgctggctctgcatgaaa 1359
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    aggaaaaggaaaaggtgttg 431
              ||||||||||||||||||||
Sbjct: 777654 aggaaaaggaaaaggtgttg 777673
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>gb|AC009981.6|AC009981 Drosophila melanogaster, chromosome 3R, region 97C-97D, BAC clone
             BACR24O14, complete sequence
          Length = 170356

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 401   caacaatggctaggaaaaggaaaa 424
             ||||||||||| ||||||||||||
Sbjct: 11359 caacaatggctgggaaaaggaaaa 11336
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>gb|AC008215.5|AC008215 Drosophila melanogaster, chromosome 3R, region 97C-97C, BAC clone
              BACR08N03, complete sequence
          Length = 165439

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 401    caacaatggctaggaaaaggaaaa 424
              ||||||||||| ||||||||||||
Sbjct: 148077 caacaatggctgggaaaaggaaaa 148054
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>ref|XM_233761.3| PREDICTED: Rattus norvegicus IBR domain containing 3 (predicted)
           (Ibrdc3_predicted), mRNA
          Length = 2393

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 672 tctgctggctctgcatgaaa 691
           ||||||||||||||||||||
Sbjct: 785 tctgctggctctgcatgaaa 804
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>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0427G12
          Length = 185545

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 412   aggaaaaggaaaaggtgttg 431
             ||||||||||||||||||||
Sbjct: 76874 aggaaaaggaaaaggtgttg 76893
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>gb|AE003757.2| Drosophila melanogaster chromosome 3R, section 95 of 118 of the complete
              sequence
          Length = 191834

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 401    caacaatggctaggaaaaggaaaa 424
              ||||||||||| ||||||||||||
Sbjct: 156608 caacaatggctgggaaaaggaaaa 156585
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>gb|AC005691.1|AC005691 Homo sapiens chromosome 17, clone  hRPK.28_A_22, complete sequence
          Length = 156821

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   caagctatccaacattcatt 183
             ||||||||||||||||||||
Sbjct: 96761 caagctatccaacattcatt 96742
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>gb|AF018435.1|ACADL3 Mus musculus long-chain acyl-CoA dehydrogenase (Acadl) gene, exons 2
            and 3
          Length = 5283

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 573  tcagctggtccttggcattt 592
            ||||||||||||||||||||
Sbjct: 2686 tcagctggtccttggcattt 2667
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>gb|AC151721.2| Mus musculus BAC clone RP23-68E12 from 5, complete sequence
          Length = 218524

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 108   ctcaattaagaagttagttccaag 131
             |||||||||||||||||| |||||
Sbjct: 18280 ctcaattaagaagttagtgccaag 18303
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>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 683    tgcatgaaatcagccctgga 702
              ||||||||||||||||||||
Sbjct: 508411 tgcatgaaatcagccctgga 508430
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>gb|M63543.1|HUMHDAD Human cosmid HDAD (8C10E13) DNA
          Length = 40103

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gtgccccccttctcaggaag 65
             ||||||||||||||||||||
Sbjct: 36489 gtgccccccttctcaggaag 36508
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>gb|M63544.1|HUMHDABCD Human DNA sequence of contig comprising 3 cosmids (HDAB, HDAC, HDAD)
          Length = 58864

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 46    gtgccccccttctcaggaag 65
             ||||||||||||||||||||
Sbjct: 55250 gtgccccccttctcaggaag 55269


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,772,319
Number of Sequences: 3902068
Number of extensions: 5772319
Number of successful extensions: 111446
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111310
Number of HSP's gapped (non-prelim): 127
length of query: 704
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 681
effective length of database: 17,143,297,704
effective search space: 11674585736424
effective search space used: 11674585736424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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