ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14e24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK068577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 299 7e-78
2gb|AY107796.1| Zea mays PCO067331 mRNA sequence 224 3e-55
3gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
4gb|AC136447.4| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
5dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
7ref|NM_103432.1| Arabidopsis thaliana unknown protein AT1G42440 ... 56 2e-04
8gb|BT000755.1| Arabidopsis thaliana clone RAFL09-54-N01 (R19034)... 56 2e-04
9gb|AY133551.1| Arabidopsis thaliana At1g42440/F7F22_7 mRNA, comp... 56 2e-04
10gb|AF361826.1| Arabidopsis thaliana At1g42440/F7F22_7 mRNA, comp... 56 2e-04
11ref|XM_824258.1| Trypanosoma brucei TREU927 hypothetical protein... 44 0.63
12gb|DQ020485.1| Sus scrofa clone BAC KNP_244B5, complete sequence 44 0.63
13emb|AL354948.7| Human DNA sequence from clone RP11-378F20 on chr... 42 2.5
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
15gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Ca... 42 2.5
16dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
17dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.5
18emb|AL583785.2|HS536O18 Homo sapiens chromosome 9 BAC RP11-536O1... 42 2.5
19gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome 40 9.8
20gb|AY350713.1| Capsella rubella clone BAC Cr33L6, complete sequence 40 9.8
21gb|AC134894.4| Mus musculus BAC clone RP24-260P1 from chromosome... 40 9.8
22gb|AC110541.12| Mus musculus chromosome 7, clone RP23-105F19, co... 40 9.8
23gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, com... 40 9.8
24emb|CR396585.6| Zebrafish DNA sequence from clone DKEY-270J5 in ... 40 9.8
25emb|Z99716.4|HS250D10 Human DNA sequence from clone CTA-250D10 o... 40 9.8
26emb|AL451010.4| Human DNA sequence from clone RP11-163M2 on chro... 40 9.8
27gb|BC021526.1| Mus musculus ADP-dependent glucokinase, mRNA (cDN... 40 9.8
28emb|BX000435.21| Zebrafish DNA sequence from clone DKEY-12L8 in ... 40 9.8
29ref|NM_028121.2| Mus musculus ADP-dependent glucokinase (Adpgk),... 40 9.8
30gb|AC112507.7| Homo sapiens 3 BAC RP11-321C3 (Roswell Park Cance... 40 9.8
31gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete se... 40 9.8
32dbj|AK149942.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.8
33dbj|AK167634.1| Mus musculus 11 days pregnant adult female place... 40 9.8
34dbj|AK162169.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 9.8
35dbj|AK169590.1| Mus musculus 2 days neonate thymus thymic cells ... 40 9.8
36gb|AY283928.2| Bacteriophage KVP40, complete genome 40 9.8
37dbj|AK011434.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 9.8
38gb|BC094657.1| Mus musculus ADP-dependent glucokinase, mRNA (cDN... 40 9.8
39gb|AC055769.4|AC055769 Arabidopsis thaliana chromosome 1 BAC T9G... 40 9.8
40gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana... 40 9.8
41gb|AC002366.1|AC002366 Human Xp22 BAC CT-285I15 (from CalTech/Re... 40 9.8
42dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 9.8
43gb|AC160111.2| Mus musculus BAC clone RP24-144L16 from chromosom... 40 9.8 
>dbj|AK068577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157I04, full
            insert sequence
          Length = 2939

 Score =  299 bits (151), Expect = 7e-78
 Identities = 357/428 (83%)
 Strand = Plus / Minus

                                                                        
Query: 291  tgttctggccatttggggaaagctcgtttgaacaagctcatacacacggtatcgtgctgc 350
            |||||||||||||||||| |||| |||||| | | |||||| ||||||||||| ||||||
Sbjct: 2531 tgttctggccatttggggtaagcgcgtttgtaaaggctcatgcacacggtatcatgctgc 2472

                                                                        
Query: 351  tggacgctgctgttgaatatgcatttcatcgaaccatgggtgccgacagtctccttgatc 410
            ||||||||||| ||||||||||||||||| | |||||| ||||| |||||||||||||| 
Sbjct: 2471 tggacgctgctattgaatatgcatttcatagcaccatgagtgccaacagtctccttgatt 2412

                                                                        
Query: 411  cggccgcgtttgccatgtttcgtccacagctcaacaggcttgaaccatctgacgtcttct 470
            ||||| |||   |||||||||||||||| ||| |||||||| |||||  |||| ||||| 
Sbjct: 2411 cggccacgtcgaccatgtttcgtccacaactctacaggcttaaaccacttgacatcttca 2352

                                                                        
Query: 471  gggtggtggaacatgtaccgcaccattgctttgagtttcgagactctctggggataccca 530
            || | || ||||||||| ||||| | |||||| ||||| ||||| |  || ||||| |||
Sbjct: 2351 ggattgtagaacatgtatcgcactactgctttcagttttgagacccgttgaggataacca 2292

                                                                        
Query: 531  gtcaatacaannnnnnngagaataatctggtcaggatccacacttttcagtgtacctact 590
            ||||| ||||        ||||||||| |||| ||||||||||||||||||| ||| || 
Sbjct: 2291 gtcaaaacaattttcttaagaataatccggtccggatccacacttttcagtgaaccaaca 2232

                                                                        
Query: 591  gcagcaatgacaggttgttgcccatctatgttcttcaaaacaatcagaggaacgggtgga 650
            ||||||||| |||| || | ||||||| || |||| | |||||| ||||| |  || |||
Sbjct: 2231 gcagcaatggcaggctgctccccatctctgctctttagaacaataagagggagtggagga 2172

                                                                        
Query: 651  aaggaaattggagcatagacggaggcaatagaaaatcgcccatgatgtaaaaatctctcc 710
            ||| ||||||||||||| || ||||||| |||||| ||||||||||||| ||| ||||||
Sbjct: 2171 aagcaaattggagcatatacagaggcaacagaaaaccgcccatgatgtagaaacctctcc 2112

                    
Query: 711  atcttatg 718
            ||||||||
Sbjct: 2111 atcttatg 2104
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>gb|AY107796.1| Zea mays PCO067331 mRNA sequence
          Length = 818

 Score =  224 bits (113), Expect = 3e-55
 Identities = 322/394 (81%)
 Strand = Plus / Minus

                                                                       
Query: 322 acaagctcatacacacggtatcgtgctgctggacgctgctgttgaatatgcatttcatcg 381
           |||||||||| ||||| ||||| |||||||| | |||||| ||||||| ||||||||| |
Sbjct: 466 acaagctcatgcacacagtatcatgctgctgaatgctgctattgaataagcatttcatgg 407

                                                                       
Query: 382 aaccatgggtgccgacagtctccttgatccggccgcgtttgccatgtttcgtccacagct 441
            |||||| || || |||||||||||||| ||||| ||    |||||||| ||||||| ||
Sbjct: 406 caccatgagtaccaacagtctccttgatgcggccacgacgaccatgttttgtccacaact 347

                                                                       
Query: 442 caacaggcttgaaccatctgacgtcttctgggtggtggaacatgtaccgcaccattgctt 501
           ||||||||||||||||| | ||||| || || | ||||||||| |||||||| || | ||
Sbjct: 346 caacaggcttgaaccattttacgtcgtcgggattgtggaacatataccgcacgatcgatt 287

                                                                       
Query: 502 tgagtttcgagactctctggggatacccagtcaatacaannnnnnngagaataatctggt 561
           | ||||||||||||||||| |||||||| ||||  ||||        ||||| ||| |||
Sbjct: 286 tcagtttcgagactctctgtggatacccggtcagaacaattttcttcagaatgatccggt 227

                                                                       
Query: 562 caggatccacacttttcagtgtacctactgcagcaatgacaggttgttgcccatctatgt 621
           | |||||||||||||| || | |||||| ||||  ||| ||||||| |  |||||| |||
Sbjct: 226 ctggatccacactttttagcgaacctacagcagagatggcaggttgctcgccatctctgt 167

                                                                       
Query: 622 tcttcaaaacaatcagaggaacgggtggaaaggaaattggagcatagacggaggcaatag 681
           |||||||||| || |||||||  || || ||||||||||||||||| || || ||||  |
Sbjct: 166 tcttcaaaactattagaggaagtggagggaaggaaattggagcatatacagatgcaaccg 107

                                             
Query: 682 aaaatcgcccatgatgtaaaaatctctccatctt 715
           ||||||| ||||| || | |||||||||||||||
Sbjct: 106 aaaatcggccatgctgcagaaatctctccatctt 73
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>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14,
              complete sequence
          Length = 121894

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Minus

                                                                          
Query: 549    agaataatctggtcaggatccacacttttcagtgtacctactgcagcaatgacaggttgt 608
              ||||||||| |||| ||||||||||||||||||| ||| || ||||||||| |||| || 
Sbjct: 109910 agaataatccggtccggatccacacttttcagtgaaccaacagcagcaatggcaggctgc 109851

                                                                          
Query: 609    tgcccatctatgttcttcaaaacaatcagaggaacgggtggaaaggaaattggagcatag 668
              | ||||||| || |||| | |||||| ||||| |  || |||||| ||||||||||||| 
Sbjct: 109850 tccccatctctgctctttagaacaataagagggagtggaggaaagcaaattggagcatat 109791

                                                                
Query: 669    acggaggcaatagaaaatcgcccatgatgtaaaaatctctccatcttatg 718
              || ||||||| |||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 109790 acagaggcaacagaaaaccgcccatgatgtagaaacctctccatcttatg 109741



 Score =  113 bits (57), Expect = 8e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                          
Query: 291    tgttctggccatttggggaaagctcgtttgaacaagctcatacacacggtatcgtgctgc 350
              |||||||||||||||||| |||| |||||| | | |||||| ||||||||||| ||||||
Sbjct: 111165 tgttctggccatttggggtaagcgcgtttgtaaaggctcatgcacacggtatcatgctgc 111106

                                           
Query: 351    tggacgctgctgttgaatatgcatttcat 379
              ||||||||||| |||||||||||||||||
Sbjct: 111105 tggacgctgctattgaatatgcatttcat 111077



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                          
Query: 383    accatgggtgccgacagtctccttgatccggccgcgtttgccatgtttcgtccacagctc 442
              |||||| ||||| |||||||||||||| ||||| |||   |||||||||||||||| |||
Sbjct: 110999 accatgagtgccaacagtctccttgattcggccacgtcgaccatgtttcgtccacaactc 110940

                      
Query: 443    aacaggct 450
               |||||||
Sbjct: 110939 tacaggct 110932
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>gb|AC136447.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0056F11, complete sequence
          Length = 89986

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Plus

                                                                         
Query: 549   agaataatctggtcaggatccacacttttcagtgtacctactgcagcaatgacaggttgt 608
             ||||||||| |||| ||||||||||||||||||| ||| || ||||||||| |||| || 
Sbjct: 86775 agaataatccggtccggatccacacttttcagtgaaccaacagcagcaatggcaggctgc 86834

                                                                         
Query: 609   tgcccatctatgttcttcaaaacaatcagaggaacgggtggaaaggaaattggagcatag 668
             | ||||||| || |||| | |||||| ||||| |  || |||||| ||||||||||||| 
Sbjct: 86835 tccccatctctgctctttagaacaataagagggagtggaggaaagcaaattggagcatat 86894

                                                               
Query: 669   acggaggcaatagaaaatcgcccatgatgtaaaaatctctccatcttatg 718
             || ||||||| |||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 86895 acagaggcaacagaaaaccgcccatgatgtagaaacctctccatcttatg 86944



 Score =  113 bits (57), Expect = 8e-22
 Identities = 81/89 (91%)
 Strand = Plus / Plus

                                                                         
Query: 291   tgttctggccatttggggaaagctcgtttgaacaagctcatacacacggtatcgtgctgc 350
             |||||||||||||||||| |||| |||||| | | |||||| ||||||||||| ||||||
Sbjct: 85520 tgttctggccatttggggtaagcgcgtttgtaaaggctcatgcacacggtatcatgctgc 85579

                                          
Query: 351   tggacgctgctgttgaatatgcatttcat 379
             ||||||||||| |||||||||||||||||
Sbjct: 85580 tggacgctgctattgaatatgcatttcat 85608



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 383   accatgggtgccgacagtctccttgatccggccgcgtttgccatgtttcgtccacagctc 442
             |||||| ||||| |||||||||||||| ||||| |||   |||||||||||||||| |||
Sbjct: 85686 accatgagtgccaacagtctccttgattcggccacgtcgaccatgtttcgtccacaactc 85745

                     
Query: 443   aacaggct 450
              |||||||
Sbjct: 85746 tacaggct 85753
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Minus

                                                                            
Query: 549      agaataatctggtcaggatccacacttttcagtgtacctactgcagcaatgacaggttgt 608
                ||||||||| |||| ||||||||||||||||||| ||| || ||||||||| |||| || 
Sbjct: 10920390 agaataatccggtccggatccacacttttcagtgaaccaacagcagcaatggcaggctgc 10920331

                                                                            
Query: 609      tgcccatctatgttcttcaaaacaatcagaggaacgggtggaaaggaaattggagcatag 668
                | ||||||| || |||| | |||||| ||||| |  || |||||| ||||||||||||| 
Sbjct: 10920330 tccccatctctgctctttagaacaataagagggagtggaggaaagcaaattggagcatat 10920271

                                                                  
Query: 669      acggaggcaatagaaaatcgcccatgatgtaaaaatctctccatcttatg 718
                || ||||||| |||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 10920270 acagaggcaacagaaaaccgcccatgatgtagaaacctctccatcttatg 10920221



 Score =  113 bits (57), Expect = 8e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                            
Query: 291      tgttctggccatttggggaaagctcgtttgaacaagctcatacacacggtatcgtgctgc 350
                |||||||||||||||||| |||| |||||| | | |||||| ||||||||||| ||||||
Sbjct: 10921645 tgttctggccatttggggtaagcgcgtttgtaaaggctcatgcacacggtatcatgctgc 10921586

                                             
Query: 351      tggacgctgctgttgaatatgcatttcat 379
                ||||||||||| |||||||||||||||||
Sbjct: 10921585 tggacgctgctattgaatatgcatttcat 10921557



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 383      accatgggtgccgacagtctccttgatccggccgcgtttgccatgtttcgtccacagctc 442
                |||||| ||||| |||||||||||||| ||||| |||   |||||||||||||||| |||
Sbjct: 10921479 accatgagtgccaacagtctccttgattcggccacgtcgaccatgtttcgtccacaactc 10921420

                        
Query: 443      aacaggct 450
                 |||||||
Sbjct: 10921419 tacaggct 10921412
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  139 bits (70), Expect = 1e-29
 Identities = 145/170 (85%)
 Strand = Plus / Minus

                                                                            
Query: 549      agaataatctggtcaggatccacacttttcagtgtacctactgcagcaatgacaggttgt 608
                ||||||||| |||| ||||||||||||||||||| ||| || ||||||||| |||| || 
Sbjct: 10999579 agaataatccggtccggatccacacttttcagtgaaccaacagcagcaatggcaggctgc 10999520

                                                                            
Query: 609      tgcccatctatgttcttcaaaacaatcagaggaacgggtggaaaggaaattggagcatag 668
                | ||||||| || |||| | |||||| ||||| |  || |||||| ||||||||||||| 
Sbjct: 10999519 tccccatctctgctctttagaacaataagagggagtggaggaaagcaaattggagcatat 10999460

                                                                  
Query: 669      acggaggcaatagaaaatcgcccatgatgtaaaaatctctccatcttatg 718
                || ||||||| |||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 10999459 acagaggcaacagaaaaccgcccatgatgtagaaacctctccatcttatg 10999410



 Score =  113 bits (57), Expect = 8e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                            
Query: 291      tgttctggccatttggggaaagctcgtttgaacaagctcatacacacggtatcgtgctgc 350
                |||||||||||||||||| |||| |||||| | | |||||| ||||||||||| ||||||
Sbjct: 11000834 tgttctggccatttggggtaagcgcgtttgtaaaggctcatgcacacggtatcatgctgc 11000775

                                             
Query: 351      tggacgctgctgttgaatatgcatttcat 379
                ||||||||||| |||||||||||||||||
Sbjct: 11000774 tggacgctgctattgaatatgcatttcat 11000746



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 383      accatgggtgccgacagtctccttgatccggccgcgtttgccatgtttcgtccacagctc 442
                |||||| ||||| |||||||||||||| ||||| |||   |||||||||||||||| |||
Sbjct: 11000668 accatgagtgccaacagtctccttgattcggccacgtcgaccatgtttcgtccacaactc 11000609

                        
Query: 443      aacaggct 450
                 |||||||
Sbjct: 11000608 tacaggct 11000601
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>ref|NM_103432.1| Arabidopsis thaliana unknown protein AT1G42440 mRNA, complete cds
          Length = 2741

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 441  tcaacaggcttgaaccatctgacgtcttctgggtggtggaacat 484
            |||||||||||||||||| | |||||||| |||| |||||||||
Sbjct: 2326 tcaacaggcttgaaccatttcacgtcttcggggttgtggaacat 2283
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>gb|BT000755.1| Arabidopsis thaliana clone RAFL09-54-N01 (R19034) unknown protein
            (At1g42440) mRNA, complete cds
          Length = 2717

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 441  tcaacaggcttgaaccatctgacgtcttctgggtggtggaacat 484
            |||||||||||||||||| | |||||||| |||| |||||||||
Sbjct: 2306 tcaacaggcttgaaccatttcacgtcttcggggttgtggaacat 2263
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>gb|AY133551.1| Arabidopsis thaliana At1g42440/F7F22_7 mRNA, complete cds
          Length = 2382

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 441  tcaacaggcttgaaccatctgacgtcttctgggtggtggaacat 484
            |||||||||||||||||| | |||||||| |||| |||||||||
Sbjct: 2210 tcaacaggcttgaaccatttcacgtcttcggggttgtggaacat 2167
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>gb|AF361826.1| Arabidopsis thaliana At1g42440/F7F22_7 mRNA, complete cds
          Length = 2742

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                        
Query: 441  tcaacaggcttgaaccatctgacgtcttctgggtggtggaacat 484
            |||||||||||||||||| | |||||||| |||| |||||||||
Sbjct: 2326 tcaacaggcttgaaccatttcacgtcttcggggttgtggaacat 2283
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>ref|XM_824258.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.52.0010)
           partial mRNA
          Length = 1293

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 335 cacggtatcgtgctgctggacg 356
           ||||||||||||||||||||||
Sbjct: 661 cacggtatcgtgctgctggacg 682
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>gb|DQ020485.1| Sus scrofa clone BAC KNP_244B5, complete sequence
          Length = 151947

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 551    aataatctggtcaggatccaca 572
              ||||||||||||||||||||||
Sbjct: 114135 aataatctggtcaggatccaca 114156
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>emb|AL354948.7| Human DNA sequence from clone RP11-378F20 on chromosome 9 Contains
           a novel gene, complete sequence
          Length = 175097

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 165 agcacccaccaccgctccact 185
           |||||||||||||||||||||
Sbjct: 321 agcacccaccaccgctccact 301
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 273      tatatttgatgatagaaatgt 293
                |||||||||||||||||||||
Sbjct: 22201843 tatatttgatgatagaaatgt 22201823
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>gb|AC093028.13| Homo sapiens 12 BAC RP11-604N13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 153517

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 692   atgatgtaaaaatctctccatctta 716
             ||||||||||||| |||||||||||
Sbjct: 14627 atgatgtaaaaatatctccatctta 14603
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>dbj|AP004662.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0048G02
          Length = 155542

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 273   tatatttgatgatagaaatgt 293
             |||||||||||||||||||||
Sbjct: 18219 tatatttgatgatagaaatgt 18199
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>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1117_F10
          Length = 169948

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 273    tatatttgatgatagaaatgt 293
              |||||||||||||||||||||
Sbjct: 164806 tatatttgatgatagaaatgt 164786
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>emb|AL583785.2|HS536O18 Homo sapiens chromosome 9 BAC RP11-536O18, complete sequence
          Length = 174798

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 165   agcacccaccaccgctccact 185
             |||||||||||||||||||||
Sbjct: 97299 agcacccaccaccgctccact 97279
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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 299     ccatttggggaaagctcgtttgaa 322
               ||||||||| ||||||||||||||
Sbjct: 2397685 ccatttgggtaaagctcgtttgaa 2397708
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>gb|AY350713.1| Capsella rubella clone BAC Cr33L6, complete sequence
          Length = 74492

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   cttctgggtggtggaacatg 485
             ||||||||||||||||||||
Sbjct: 27382 cttctgggtggtggaacatg 27363
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>gb|AC134894.4| Mus musculus BAC clone RP24-260P1 from chromosome 9, complete sequence
          Length = 136085

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    cagcctgttggcaacataaa 58
             ||||||||||||||||||||
Sbjct: 45197 cagcctgttggcaacataaa 45216
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>gb|AC110541.12| Mus musculus chromosome 7, clone RP23-105F19, complete sequence
          Length = 213499

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 581    tgtacctactgcagcaatgacagg 604
              |||||||||||||||| |||||||
Sbjct: 115571 tgtacctactgcagcactgacagg 115548
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>gb|AC113527.8| Mus musculus chromosome 9, clone RP23-314E23, complete sequence
          Length = 202544

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     cagcctgttggcaacataaa 58
              ||||||||||||||||||||
Sbjct: 192830 cagcctgttggcaacataaa 192811
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>emb|CR396585.6| Zebrafish DNA sequence from clone DKEY-270J5 in linkage group 15,
              complete sequence
          Length = 138953

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     gacagtacaacacaaggcaa 95
              ||||||||||||||||||||
Sbjct: 118911 gacagtacaacacaaggcaa 118892
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>emb|Z99716.4|HS250D10 Human DNA sequence from clone CTA-250D10 on chromosome 22 Contains the
              genes for SREBF2 (sterol regulatory element binding
              transcription factor 2), NAGA
              (alpha-N-acetylgalactosaminidase), a gene similar to
              neuronal-specific septin 3, a pseudogene similar to ANT2
              (adenine nucleotide translocator 2), 2 mRNAs based on ESTs,
              a genomic marker D22S1178, a CA repeat polymorpism, ESTs
              and a CpG island, complete sequence
          Length = 220895

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    ctgcatcaacaagcacccaccacc 177
              ||||||||||| ||||||||||||
Sbjct: 198390 ctgcatcaacaggcacccaccacc 198413
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>emb|AL451010.4| Human DNA sequence from clone RP11-163M2 on chromosome 1 Contains a novel
              gene, a pseudogene similar to part of actin, beta (ACTB),
              the GLMN gene for glomulin, FKBP associated protein and a
              novel gene (FLJ13150), complete sequence
          Length = 184144

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 691    catgatgtaaaaatctctcc 710
              ||||||||||||||||||||
Sbjct: 156438 catgatgtaaaaatctctcc 156419
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>gb|BC021526.1| Mus musculus ADP-dependent glucokinase, mRNA (cDNA clone MGC:38532
            IMAGE:5353637), complete cds
          Length = 2472

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1690 cagcctgttggcaacataaa 1709
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>emb|BX000435.21| Zebrafish DNA sequence from clone DKEY-12L8 in linkage group 1, complete
              sequence
          Length = 201673

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    ctgctggacgctgctgttga 366
              ||||||||||||||||||||
Sbjct: 161466 ctgctggacgctgctgttga 161485



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    ctgctggacgctgctgttga 366
              ||||||||||||||||||||
Sbjct: 133283 ctgctggacgctgctgttga 133302
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>ref|NM_028121.2| Mus musculus ADP-dependent glucokinase (Adpgk), mRNA
          Length = 2499

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1706 cagcctgttggcaacataaa 1725
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>gb|AC112507.7| Homo sapiens 3 BAC RP11-321C3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 184696

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 614    atctatgttcttcaaaacaa 633
              ||||||||||||||||||||
Sbjct: 124702 atctatgttcttcaaaacaa 124721
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>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence
          Length = 141776

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     acagtacaacacaaggcaaa 96
              ||||||||||||||||||||
Sbjct: 133350 acagtacaacacaaggcaaa 133331
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>dbj|AK149942.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530106P09 product:RbBP-35 homolog [Homo
            sapiens], full insert sequence
          Length = 1736

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1675 cagcctgttggcaacataaa 1694
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>dbj|AK167634.1| Mus musculus 11 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:I530025L22
            product:RbBP-35 homolog [Homo sapiens], full insert
            sequence
          Length = 2467

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1704 cagcctgttggcaacataaa 1723
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>dbj|AK162169.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420444E01 product:RbBP-35
            homolog [Homo sapiens], full insert sequence
          Length = 2419

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1660 cagcctgttggcaacataaa 1679
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>dbj|AK169590.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430001A13
            product:RbBP-35 homolog [Homo sapiens], full insert
            sequence
          Length = 2437

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1670 cagcctgttggcaacataaa 1689
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>gb|AY283928.2| Bacteriophage KVP40, complete genome
          Length = 244834

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 676   caatagaaaatcgcccatga 695
             ||||||||||||||||||||
Sbjct: 64262 caatagaaaatcgcccatga 64243
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>dbj|AK011434.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:2610017G09 product:RBBP-35
            homolog [Homo sapiens], full insert sequence
          Length = 2431

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 1671 cagcctgttggcaacataaa 1690
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>gb|BC094657.1| Mus musculus ADP-dependent glucokinase, mRNA (cDNA clone
            IMAGE:6844388), complete cds
          Length = 5171

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   cagcctgttggcaacataaa 58
            ||||||||||||||||||||
Sbjct: 4378 cagcctgttggcaacataaa 4397
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>gb|AC055769.4|AC055769 Arabidopsis thaliana chromosome 1 BAC T9G5 genomic sequence, complete
             sequence
          Length = 33913

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 566   atccacacttttcagtgtacctac 589
             |||||||||||||| |||||||||
Sbjct: 33645 atccacacttttcattgtacctac 33622
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>gb|AC017118.3|AC017118 Genomic sequence for Arabidopsis thaliana BAC F6N18 from chromosome
            I, complete sequence
          Length = 92219

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 566  atccacacttttcagtgtacctac 589
            |||||||||||||| |||||||||
Sbjct: 4762 atccacacttttcattgtacctac 4739
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>gb|AC002366.1|AC002366 Human Xp22 BAC CT-285I15 (from CalTech/Research Genetics) , PAC
             RPCI1-27C22 (from Roswell Park Cancer Center), and Cosmid
             U35B5 (from Lawrence Livermore), complete sequence
          Length = 259202

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   tgatgatagaaatgttctgg 298
             ||||||||||||||||||||
Sbjct: 63705 tgatgatagaaatgttctgg 63686
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 310     aagctcgtttgaacaagctcatac 333
               |||||||||||| |||||||||||
Sbjct: 4129648 aagctcgtttgaccaagctcatac 4129671
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>gb|AC160111.2| Mus musculus BAC clone RP24-144L16 from chromosome 9, complete sequence
          Length = 134313

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     cagcctgttggcaacataaa 58
              ||||||||||||||||||||
Sbjct: 128437 cagcctgttggcaacataaa 128456


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,817,115
Number of Sequences: 3902068
Number of extensions: 5817115
Number of successful extensions: 94579
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94383
Number of HSP's gapped (non-prelim): 195
length of query: 718
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 695
effective length of database: 17,143,297,704
effective search space: 11914591904280
effective search space used: 11914591904280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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