ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd14c19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clon... 333 4e-88
2ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothet... 315 1e-82
3gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 143 8e-31
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 143 8e-31
6gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence 129 1e-26
7gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence 123 7e-25
8dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.14
9ref|NM_001036784.1| Arabidopsis thaliana unknown protein AT5G096... 44 0.54
10gb|AC102627.8| Mus musculus chromosome 14, clone RP23-466M3, com... 44 0.54
11dbj|AK175645.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 44 0.54
12dbj|AK175110.1| Arabidopsis thaliana mRNA, complete cds, clone: ... 44 0.54
13dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.54
14emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, B... 44 0.54
15gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 42 2.1
16gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome 42 2.1
17ref|NM_116602.2| Arabidopsis thaliana unknown protein AT4G03640 ... 40 8.5
18gb|AF100655.2| Caenorhabditis elegans cosmid C44C8, complete seq... 40 8.5
19gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV... 40 8.5
20gb|AC119431.13| Mus musculus chromosome 1, clone RP24-100O3, com... 40 8.5
21gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, com... 40 8.5
22gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, c... 40 8.5
23ref|XM_451081.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01848g ... 40 8.5
24gb|AC121606.3| Mus musculus BAC clone RP23-314H5 from chromosome... 40 8.5
25gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome... 40 8.5
26emb|AL590290.5| Human DNA sequence from clone RP11-228O6 on chro... 40 8.5
27ref|XM_965976.1| PREDICTED: Tribolium castaneum similar to CG548... 40 8.5
28emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.5
29emb|CR380959.1| Candida glabrata strain CBS138 chromosome M comp... 40 8.5
30gb|AF022971.1| Caenorhabditis elegans cosmid C31B8, complete seq... 40 8.5
31emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, c... 40 8.5
32gb|AC165950.1| Mus musculus BAC clone RP24-235L20 from chromosom... 40 8.5
33gb|AY055209.1| Cheilosia urbana tRNA-Leu gene, partial sequence;... 40 8.5
34gb|AF203584.1|AF203584 Zornia sp. Lavin 5039 maturase (matK) gen... 40 8.5
35gb|AC010418.6|AC010418 Homo sapiens chromosome 5 clone CTD-2177G... 40 8.5
36gb|AC159476.5| Mus musculus 10 BAC RP23-53O16 (Roswell Park Canc... 40 8.5
37gb|AC157506.3| Medicago truncatula chromosome 7 BAC clone mth2-5... 40 8.5
38gb|AC106715.5| Homo sapiens 3 BAC RP11-695J20 (Roswell Park Canc... 40 8.5
39gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complet... 40 8.5
40gb|AY180177.1| Mus musculus KIS kinase (Kis) gene, exons 1 throu... 40 8.5
41gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, c... 40 8.5
42gb|AC018765.4|AC018765 Homo sapiens chromosome 5 clone CTD-2351A... 40 8.5
43emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in... 40 8.5
44dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16,... 40 8.5
45gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome 40 8.5
46gb|AC024830.2| Caenorhabditis elegans cosmid Y55F3BR, complete s... 40 8.5
47gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, co... 40 8.5
48dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.5
49gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, co... 40 8.5
50gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, c... 40 8.5
51gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, co... 40 8.5
52emb|BX255949.3| Zebrafish DNA sequence from clone DKEY-76F5 in l... 40 8.5
53gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, compl... 40 8.5
54gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, compl... 40 8.5
55gb|U97553.1|U97553 Murine herpesvirus 68 strain WUMS, complete g... 40 8.5
56dbj|AP004974.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 8.5
57dbj|AP000152.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 8.5
58dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 8.5
59dbj|AP001412.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB... 40 8.5 
>dbj|AK067754.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114M12, full
            insert sequence
          Length = 1599

 Score =  333 bits (168), Expect = 4e-88
 Identities = 330/384 (85%)
 Strand = Plus / Minus

                                                                        
Query: 225  gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 284
            ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 1080 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 1021

                                                                        
Query: 285  tgatgtagcttcggctaccaatttcaccgccgttgaaagagcatgcccttttgccatcaa 344
            ||||||||||||    |||| |||||| |||| ||| |||| ||| || |  | ||||||
Sbjct: 1020 tgatgtagcttcactcaccattttcactgccgctgacagaggatgtccctgcgtcatcaa 961

                                                                        
Query: 345  ttctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaattgagtt 404
            ||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||| | ||
Sbjct: 960  ttctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaattaactt 901

                                                                        
Query: 405  cccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttcatttgc 464
             || |||||||| |  || ||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 900  tccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttcattcgc 841

                                                                        
Query: 465  ttctcctagagttcctcgccaaaactcttcatgcaatttggttatctcccttgcaataac 524
            ||| || | |||||| |||||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 840  ttcaccaatagttccccgccaaaactcttcgtgtaatttcgttatctcccttgcaataac 781

                                                                        
Query: 525  acatgaccttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatg 584
            ||||||||| ||||||||||| || ||||||||||||  |||||| || |||||||||||
Sbjct: 780  acatgacctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatg 721

                                    
Query: 585  aggaggaacatagaatatttgtgt 608
             |||||||||||||| ||||||||
Sbjct: 720  gggaggaacatagaaaatttgtgt 697
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>ref|NM_196485.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0045B21.18), mRNA
          Length = 1113

 Score =  315 bits (159), Expect = 1e-82
 Identities = 300/347 (86%)
 Strand = Plus / Minus

                                                                       
Query: 262 gcataaacatctttcttctttgctgatgtagcttcggctaccaatttcaccgccgttgaa 321
           ||||||||||| |||||||||||||||||||||||    |||| |||||| |||| ||| 
Sbjct: 980 gcataaacatccttcttctttgctgatgtagcttcactcaccattttcactgccgctgac 921

                                                                       
Query: 322 agagcatgcccttttgccatcaattctctgagttcatgctcaagaaaatcatcagatggt 381
           |||| ||| || |  | ||||||||||||||||||||||||||| ||||| |||||||| 
Sbjct: 920 agaggatgtccctgcgtcatcaattctctgagttcatgctcaaggaaatcctcagatgga 861

                                                                       
Query: 382 ttttcaacaattgaaattgagttcccatctatgaggatggtgatttctccctttggctgt 441
            ||||| ||  ||||||| | || || |||||||| |  || ||||||||||||||||| 
Sbjct: 860 gtttcatcagctgaaattaactttccctctatgagcactgtaatttctccctttggctgc 801

                                                                       
Query: 442 cgagttgcaaaggcttcatttgcttctcctagagttcctcgccaaaactcttcatgcaat 501
           |||||||||||||||||||||||||| || | |||||| |||||||||||||| || |||
Sbjct: 800 cgagttgcaaaggcttcatttgcttcaccaatagttccccgccaaaactcttcgtgtaat 741

                                                                       
Query: 502 ttggttatctcccttgcaataacacatgaccttgaatcaccaaaagacgaagcagcatca 561
           || ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||
Sbjct: 740 ttcgttatctcccttgcaataacacatgacctagaatcaccaaatgatgaagcagcatca 681

                                                          
Query: 562 acaagaaactgttgaattccatgaggaggaacatagaatatttgtgt 608
             |||||| || ||||||||||| |||||||||||||| ||||||||
Sbjct: 680 gaaagaaattggtgaattccatggggaggaacatagaaaatttgtgt 634
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score =  143 bits (72), Expect = 8e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                          
Query: 339    catcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaat 398
              ||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||
Sbjct: 128931 catcaattctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaat 128990

                                                                          
Query: 399    tgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttc 458
              | | || || |||||||| |  || ||||||||||||||||| |||||||||||||||||
Sbjct: 128991 taactttccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttc 129050

                                              
Query: 459    atttgcttctcctagagttcctcgccaaaact 490
              ||||||||| || | |||||| ||||||||||
Sbjct: 129051 atttgcttcaccaatagttccccgccaaaact 129082



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 225    gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 284
              ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 128666 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 128725

                          
Query: 285    tgatgtagcttc 296
              ||||||||||||
Sbjct: 128726 tgatgtagcttc 128737



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                          
Query: 530    accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 589
              |||| ||||||||||| || ||||||||||||  |||||| || ||||||||||| ||||
Sbjct: 129705 acctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatggggag 129764

                                 
Query: 590    gaacatagaatatttgtgt 608
              |||||||||| ||||||||
Sbjct: 129765 gaacatagaaaatttgtgt 129783



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                           
Query: 489    ctcttcatgcaatttggttatctcccttgcaataacacatgacct 533
              |||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 129473 ctcttcgtgtaatttcgttatctcccttgcaataacacatgacct 129517
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  143 bits (72), Expect = 8e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                            
Query: 339      catcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaat 398
                ||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||
Sbjct: 13960305 catcaattctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaat 13960364

                                                                            
Query: 399      tgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttc 458
                | | || || |||||||| |  || ||||||||||||||||| |||||||||||||||||
Sbjct: 13960365 taactttccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttc 13960424

                                                
Query: 459      atttgcttctcctagagttcctcgccaaaact 490
                ||||||||| || | |||||| ||||||||||
Sbjct: 13960425 atttgcttcaccaatagttccccgccaaaact 13960456



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 225      gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 284
                ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 13960040 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 13960099

                            
Query: 285      tgatgtagcttc 296
                ||||||||||||
Sbjct: 13960100 tgatgtagcttc 13960111



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 530      accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 589
                |||| ||||||||||| || ||||||||||||  |||||| || ||||||||||| ||||
Sbjct: 13961079 acctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatggggag 13961138

                                   
Query: 590      gaacatagaatatttgtgt 608
                |||||||||| ||||||||
Sbjct: 13961139 gaacatagaaaatttgtgt 13961157



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 489      ctcttcatgcaatttggttatctcccttgcaataacacatgacct 533
                |||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 13960847 ctcttcgtgtaatttcgttatctcccttgcaataacacatgacct 13960891
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  143 bits (72), Expect = 8e-31
 Identities = 132/152 (86%)
 Strand = Plus / Plus

                                                                            
Query: 339      catcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaat 398
                ||||||||||||||||||||||||||| ||||| ||||||||  ||||| ||  ||||||
Sbjct: 13967647 catcaattctctgagttcatgctcaaggaaatcctcagatggagtttcatcagctgaaat 13967706

                                                                            
Query: 399      tgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttc 458
                | | || || |||||||| |  || ||||||||||||||||| |||||||||||||||||
Sbjct: 13967707 taactttccctctatgagcactgtaatttctccctttggctgccgagttgcaaaggcttc 13967766

                                                
Query: 459      atttgcttctcctagagttcctcgccaaaact 490
                ||||||||| || | |||||| ||||||||||
Sbjct: 13967767 atttgcttcaccaatagttccccgccaaaact 13967798



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 225      gcattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgc 284
                ||||||||||||||||||||| | ||| | ||| || ||||||||||| |||||||||||
Sbjct: 13967382 gcattttactcattttccaaataaccttaatgcgagggcataaacatccttcttctttgc 13967441

                            
Query: 285      tgatgtagcttc 296
                ||||||||||||
Sbjct: 13967442 tgatgtagcttc 13967453



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 70/79 (88%)
 Strand = Plus / Plus

                                                                            
Query: 530      accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 589
                |||| ||||||||||| || ||||||||||||  |||||| || ||||||||||| ||||
Sbjct: 13968421 acctagaatcaccaaatgatgaagcagcatcagaaagaaattggtgaattccatggggag 13968480

                                   
Query: 590      gaacatagaatatttgtgt 608
                |||||||||| ||||||||
Sbjct: 13968481 gaacatagaaaatttgtgt 13968499



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 489      ctcttcatgcaatttggttatctcccttgcaataacacatgacct 533
                |||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 13968189 ctcttcgtgtaatttcgttatctcccttgcaataacacatgacct 13968233
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>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence
          Length = 317137

 Score =  129 bits (65), Expect = 1e-26
 Identities = 134/157 (85%)
 Strand = Plus / Plus

                                                                          
Query: 334    tttgccatcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaatt 393
              |||||| |||||||||| |||||||||||||| ||||| || |||||  ||||  ||  |
Sbjct: 176080 tttgccgtcaattctcttagttcatgctcaaggaaatcctctgatggaatttcgtcatct 176139

                                                                          
Query: 394    gaaattgagttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaag 453
              |||||| | ||||| |||||||| |  || |||||||||||||| |||||||||||||| 
Sbjct: 176140 gaaattaacttcccctctatgagcactgttatttctccctttggttgtcgagttgcaaaa 176199

                                                   
Query: 454    gcttcatttgcttctcctagagttcctcgccaaaact 490
              |||||||||||||| |||| |||||| ||||||||||
Sbjct: 176200 gcttcatttgcttcacctaaagttccacgccaaaact 176236



 Score =  115 bits (58), Expect = 2e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 226    cattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgct 285
              ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 175886 cattttacttattttccaaacaacctcaatgcgagtgcataaacatctttcttctttgct 175945

                                            
Query: 286    gatgtagcttcggctaccaatttcaccgcc 315
              ||||| ||||| |  |||||||||||||||
Sbjct: 175946 gatgtggcttcagtgaccaatttcaccgcc 175975



 Score =  111 bits (56), Expect = 3e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                          
Query: 530    accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 589
              |||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 176957 acctggaatcgccaaaagatgaagcagcatcaacaagaaactgctgaatgccatggggag 177016

                                              
Query: 590    gaacatagaatatttgtgtcacagcctcacga 621
              |||||||||||||||||||  |||| ||||||
Sbjct: 177017 gaacatagaatatttgtgtagcagcttcacga 177048
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>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score =  123 bits (62), Expect = 7e-25
 Identities = 128/150 (85%)
 Strand = Plus / Plus

                                                                          
Query: 341    tcaattctctgagttcatgctcaagaaaatcatcagatggtttttcaacaattgaaattg 400
              |||||||||| |||||||||||||| ||||| || |||||  ||||  ||  ||||||| 
Sbjct: 223874 tcaattctcttagttcatgctcaaggaaatcctctgatggaatttcgtcatctgaaatta 223933

                                                                          
Query: 401    agttcccatctatgaggatggtgatttctccctttggctgtcgagttgcaaaggcttcat 460
              | ||||| |||||||| |  || |||||||||||||| |||||||||||||| |||||||
Sbjct: 223934 acttcccctctatgagcactgttatttctccctttggttgtcgagttgcaaaagcttcat 223993

                                            
Query: 461    ttgcttctcctagagttcctcgccaaaact 490
              ||||||| |||| |||||| ||||||||||
Sbjct: 223994 ttgcttcacctaaagttccacgccaaaact 224023



 Score =  115 bits (58), Expect = 2e-22
 Identities = 82/90 (91%)
 Strand = Plus / Plus

                                                                          
Query: 226    cattttactcattttccaaacaccctcagtgctagtgcataaacatctttcttctttgct 285
              ||||||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct: 223673 cattttacttattttccaaacaacctcaatgcgagtgcataaacatctttcttctttgct 223732

                                            
Query: 286    gatgtagcttcggctaccaatttcaccgcc 315
              ||||| ||||| |  |||||||||||||||
Sbjct: 223733 gatgtggcttcagtgaccaatttcaccgcc 223762



 Score =  111 bits (56), Expect = 3e-21
 Identities = 83/92 (90%)
 Strand = Plus / Plus

                                                                          
Query: 530    accttgaatcaccaaaagacgaagcagcatcaacaagaaactgttgaattccatgaggag 589
              |||| ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 224745 acctggaatcgccaaaagatgaagcagcatcaacaagaaactgctgaatgccatggggag 224804

                                              
Query: 590    gaacatagaatatttgtgtcacagcctcacga 621
              |||||||||||||||||||  |||| ||||||
Sbjct: 224805 gaacatagaatatttgtgtagcagcttcacga 224836
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>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b,
             complete sequence
          Length = 93261

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 111   tagaaaattataaatttctaata 133
             |||||||||||||||||||||||
Sbjct: 78469 tagaaaattataaatttctaata 78447
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>ref|NM_001036784.1| Arabidopsis thaliana unknown protein AT5G09680 transcript variant
            AT5G09680.2 mRNA, complete cds
          Length = 1194

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 114  aaaattataaatttctaataca 135
            ||||||||||||||||||||||
Sbjct: 1187 aaaattataaatttctaataca 1166
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>gb|AC102627.8| Mus musculus chromosome 14, clone RP23-466M3, complete sequence
          Length = 193228

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 110   ttagaaaattataaatttctaataca 135
             ||||||||||| ||||||||||||||
Sbjct: 98740 ttagaaaattaaaaatttctaataca 98765
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>dbj|AK175645.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-13-G23
          Length = 932

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 114 aaaattataaatttctaataca 135
           ||||||||||||||||||||||
Sbjct: 897 aaaattataaatttctaataca 876
to top
>dbj|AK175110.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-51-D14
          Length = 1204

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 114  aaaattataaatttctaataca 135
            ||||||||||||||||||||||
Sbjct: 1187 aaaattataaatttctaataca 1166
to top
>dbj|AB020752.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTH16
          Length = 68098

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 114   aaaattataaatttctaataca 135
             ||||||||||||||||||||||
Sbjct: 20090 aaaattataaatttctaataca 20111
to top
>emb|AL353994.1|ATF17I14 Arabidopsis thaliana DNA chromosome 5, BAC clone F17I14 (ESSA project)
          Length = 92491

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 114   aaaattataaatttctaataca 135
             ||||||||||||||||||||||
Sbjct: 49494 aaaattataaatttctaataca 49473
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    gcaaaggcttcatttgcttct 468
              |||||||||||||||||||||
Sbjct: 898037 gcaaaggcttcatttgcttct 898057
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>gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome
          Length = 1830138

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 448    gcaaaggcttcatttgcttct 468
              |||||||||||||||||||||
Sbjct: 833710 gcaaaggcttcatttgcttct 833730
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>ref|NM_116602.2| Arabidopsis thaliana unknown protein AT4G03640 mRNA, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 attttccaaacaccctcagt 255
           ||||||||||||||||||||
Sbjct: 305 attttccaaacaccctcagt 286
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>gb|AF100655.2| Caenorhabditis elegans cosmid C44C8, complete sequence
          Length = 27179

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 gaaaattataaatttctaat 132
           ||||||||||||||||||||
Sbjct: 334 gaaaattataaatttctaat 353
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>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete
             sequence
          Length = 116448

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   attttccaaacaccctcagt 255
             ||||||||||||||||||||
Sbjct: 55770 attttccaaacaccctcagt 55751
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>gb|AC119431.13| Mus musculus chromosome 1, clone RP24-100O3, complete sequence
          Length = 205163

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     tgcgggatcaaccatacagt 68
              ||||||||||||||||||||
Sbjct: 166633 tgcgggatcaaccatacagt 166652
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>gb|AC123650.7| Mus musculus chromosome 1, clone RP23-124N16, complete sequence
          Length = 220806

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tgcgggatcaaccatacagt 68
             ||||||||||||||||||||
Sbjct: 15908 tgcgggatcaaccatacagt 15927
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>gb|AC119181.11| Mus musculus chromosome 18, clone RP24-111I16, complete sequence
          Length = 195506

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   tctttcttctttgctgatgt 290
             ||||||||||||||||||||
Sbjct: 18908 tctttcttctttgctgatgt 18927
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>ref|XM_451081.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A01848g predicted mRNA
          Length = 1938

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  ttcatgctcaagaaaatcat 373
            ||||||||||||||||||||
Sbjct: 1003 ttcatgctcaagaaaatcat 1022
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>gb|AC121606.3| Mus musculus BAC clone RP23-314H5 from chromosome 1, complete sequence
          Length = 200095

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 49     tgcgggatcaaccatacagt 68
              ||||||||||||||||||||
Sbjct: 126247 tgcgggatcaaccatacagt 126228
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>gb|AC153364.4| Mus musculus BAC clone RP23-35J21 from chromosome 10, complete sequence
          Length = 231668

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    attttactcattttccaaacaccc 250
              ||||||||||||||||||| ||||
Sbjct: 135352 attttactcattttccaaataccc 135375
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>emb|AL590290.5| Human DNA sequence from clone RP11-228O6 on chromosome 6, complete
             sequence
          Length = 114653

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   ggattgaatggattgcattt 230
             ||||||||||||||||||||
Sbjct: 25112 ggattgaatggattgcattt 25093
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>ref|XM_965976.1| PREDICTED: Tribolium castaneum similar to CG5485-PA (LOC659697), mRNA
          Length = 2109

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  cattttactcattttccaaa 245
            ||||||||||||||||||||
Sbjct: 1392 cattttactcattttccaaa 1373
to top
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    ttcatgctcaagaaaatcat 373
              ||||||||||||||||||||
Sbjct: 168821 ttcatgctcaagaaaatcat 168802
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>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence
          Length = 1400893

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 584    gaggaggaacatagaatatt 603
              ||||||||||||||||||||
Sbjct: 441522 gaggaggaacatagaatatt 441503
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>gb|AF022971.1| Caenorhabditis elegans cosmid C31B8, complete sequence
          Length = 44307

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  cttttgccatcaattctctg 351
            ||||||||||||||||||||
Sbjct: 3060 cttttgccatcaattctctg 3041
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>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9
          Length = 159629

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 236   attttccaaacaccctcagt 255
             ||||||||||||||||||||
Sbjct: 77048 attttccaaacaccctcagt 77029
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>gb|AC165950.1| Mus musculus BAC clone RP24-235L20 from chromosome 13, complete sequence
          Length = 178927

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 141    agctatttcttttgagggga 160
              ||||||||||||||||||||
Sbjct: 153243 agctatttcttttgagggga 153224
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>gb|AY055209.1| Cheilosia urbana tRNA-Leu gene, partial sequence; cytochrome c
           oxidase subunit II (COII) gene, complete cds; and
           tRNA-Lys gene, partial sequence; mitochondrial genes for
           mitochondrial products
          Length = 744

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 gaaaattataaatttctaat 132
           ||||||||||||||||||||
Sbjct: 442 gaaaattataaatttctaat 423
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>gb|AF203584.1|AF203584 Zornia sp. Lavin 5039 maturase (matK) gene, complete cds; chloroplast
            gene for chloroplast product
          Length = 2636

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  caacaattgaaattgagttc 405
            ||||||||||||||||||||
Sbjct: 1091 caacaattgaaattgagttc 1110
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>gb|AC010418.6|AC010418 Homo sapiens chromosome 5 clone CTD-2177G22, complete sequence
          Length = 88018

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  ttttcaacaattgaaattga 401
            ||||||||||||||||||||
Sbjct: 7422 ttttcaacaattgaaattga 7441
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>gb|AC159476.5| Mus musculus 10 BAC RP23-53O16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 212483

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   aaaattataaatttctaata 133
             ||||||||||||||||||||
Sbjct: 83569 aaaattataaatttctaata 83550
to top
>gb|AC157506.3| Medicago truncatula chromosome 7 BAC clone mth2-50e7, complete sequence
          Length = 127666

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 384   ttcaacaattgaaattgagt 403
             ||||||||||||||||||||
Sbjct: 54163 ttcaacaattgaaattgagt 54144
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>gb|AC106715.5| Homo sapiens 3 BAC RP11-695J20 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 150222

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  ttagaaaattataaatttctaata 133
            |||||| |||||||||||||||||
Sbjct: 7865 ttagaacattataaatttctaata 7842
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>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence
          Length = 172515

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    aaaattataaatttctaata 133
              ||||||||||||||||||||
Sbjct: 124925 aaaattataaatttctaata 124906
to top
>gb|AY180177.1| Mus musculus KIS kinase (Kis) gene, exons 1 through 8 and complete cds
          Length = 100207

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    tgcgggatcaaccatacagt 68
             ||||||||||||||||||||
Sbjct: 14491 tgcgggatcaaccatacagt 14510
to top
>gb|AC119914.10| Mus musculus chromosome 15, clone RP24-244H15, complete sequence
          Length = 213223

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 340    atcaattctctgagttcatgctca 363
              ||||||||||| ||||||||||||
Sbjct: 139101 atcaattctctcagttcatgctca 139124
to top
>gb|AC018765.4|AC018765 Homo sapiens chromosome 5 clone CTD-2351A16, complete sequence
          Length = 132916

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    ttttcaacaattgaaattga 401
              ||||||||||||||||||||
Sbjct: 110852 ttttcaacaattgaaattga 110833
to top
>emb|BX649473.8| Zebrafish DNA sequence from clone CH211-65G16 in linkage group 1,
              complete sequence
          Length = 167871

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     aaccatacagttgacaccaaactg 81
              |||||||||||||| |||||||||
Sbjct: 146482 aaccatacagttgaaaccaaactg 146505
to top
>dbj|BS000121.1| Pan troglodytes chromosome 22 clone:RP43-058I16, map 22, complete
             sequences
          Length = 147114

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tcccatctatgaggatggtg 423
             ||||||||||||||||||||
Sbjct: 37373 tcccatctatgaggatggtg 37354
to top
>gb|AF105037.1|AF105037 Murid herpesvirus 4 complete genome
          Length = 119550

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   agcatcaacaagaaactgtt 574
             ||||||||||||||||||||
Sbjct: 54589 agcatcaacaagaaactgtt 54608
to top
>gb|AC024830.2| Caenorhabditis elegans cosmid Y55F3BR, complete sequence
          Length = 55299

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   gaaaattataaatttctaat 132
             ||||||||||||||||||||
Sbjct: 53133 gaaaattataaatttctaat 53152
to top
>gb|AC156553.17| Mus musculus chromosome 8, clone RP23-106I21, complete sequence
          Length = 211915

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    ttttccaaacaccctcagtg 256
              ||||||||||||||||||||
Sbjct: 151426 ttttccaaacaccctcagtg 151445
to top
>dbj|AP001728.1| Homo sapiens genomic DNA, chromosome 21q, section 72/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    tcccatctatgaggatggtg 423
              ||||||||||||||||||||
Sbjct: 152149 tcccatctatgaggatggtg 152130
to top
>gb|AC131299.11| Mus musculus chromosome 15, clone RP23-335O2, complete sequence
          Length = 215708

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 340    atcaattctctgagttcatgctca 363
              ||||||||||| ||||||||||||
Sbjct: 152908 atcaattctctcagttcatgctca 152885
to top
>gb|AC116857.11| Mus musculus chromosome 18, clone RP24-403E17, complete sequence
          Length = 152500

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   tctttcttctttgctgatgt 290
             ||||||||||||||||||||
Sbjct: 26474 tctttcttctttgctgatgt 26493
to top
>gb|AC105065.13| Mus musculus chromosome 18, clone RP24-459E1, complete sequence
          Length = 154308

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   aaattataaatttctaatacatct 138
             ||||||||||||||||| ||||||
Sbjct: 25412 aaattataaatttctaacacatct 25389
to top
>emb|BX255949.3| Zebrafish DNA sequence from clone DKEY-76F5 in linkage group 2,
             complete sequence
          Length = 214484

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   agaaaattataaatttctaa 131
             ||||||||||||||||||||
Sbjct: 88939 agaaaattataaatttctaa 88920
to top
>gb|AC154216.1| Mus musculus BAC clone RP24-354I21 from 13, complete sequence
          Length = 209934

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   agctatttcttttgagggga 160
             ||||||||||||||||||||
Sbjct: 19502 agctatttcttttgagggga 19483
to top
>gb|AC125210.4| Mus musculus BAC clone RP23-148P22 from 18, complete sequence
          Length = 210193

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   aaattataaatttctaatacatct 138
             ||||||||||||||||| ||||||
Sbjct: 41934 aaattataaatttctaacacatct 41957
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>gb|U97553.1|U97553 Murine herpesvirus 68 strain WUMS, complete genome
          Length = 119450

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 555   agcatcaacaagaaactgtt 574
             ||||||||||||||||||||
Sbjct: 54588 agcatcaacaagaaactgtt 54607
to top
>dbj|AP004974.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT41A07, TM0155c,
             complete sequence
          Length = 33822

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   acttagaaaattataaattt 127
             ||||||||||||||||||||
Sbjct: 25603 acttagaaaattataaattt 25584
to top
>dbj|AP000152.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
             D47-S479, segment 4/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tcccatctatgaggatggtg 423
             ||||||||||||||||||||
Sbjct: 21566 tcccatctatgaggatggtg 21547
to top
>dbj|AP000010.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 3/13
          Length = 100000

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tcccatctatgaggatggtg 423
             ||||||||||||||||||||
Sbjct: 69221 tcccatctatgaggatggtg 69202
to top
>dbj|AP001412.2| Homo sapiens genomic DNA, chromosome 21q22.2, LB7T-ERG region,
             clone:D10
          Length = 67050

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   tcccatctatgaggatggtg 423
             ||||||||||||||||||||
Sbjct: 17520 tcccatctatgaggatggtg 17501


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,252,765
Number of Sequences: 3902068
Number of extensions: 7252765
Number of successful extensions: 153172
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152835
Number of HSP's gapped (non-prelim): 333
length of query: 621
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 598
effective length of database: 17,143,297,704
effective search space: 10251692026992
effective search space used: 10251692026992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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