ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13n04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger prot... 89 1e-17
2ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing ... 88 2e-17
3Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2... 88 2e-17
4Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2... 88 2e-17
5ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing ... 81 1e-15
6ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing ... 81 2e-15
7ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog 46 1e-04
8ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expres... 44 3e-04
9ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expr... 44 3e-04
10ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expr... 44 3e-04
11NORQ_PARDE (Q51664) Protein norQ 32 1.9
12VG40_ICHV1 (Q00145) Hypothetical gene 40 protein 30 7.4
13ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1... 30 7.4
14YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC 30 7.4
15IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interle... 29 9.7
16PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.... 29 9.7

>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1|
           (Stress-associated protein 1) (OsISAP1)
          Length = 164

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 36/53 (67%), Positives = 46/53 (86%)
 Frame = -1

Query: 525 RKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKL 367
           RKRVGLTGF CRCG+++C  HRYSD+H C +DY++AARDAIA+ NPVV+A K+
Sbjct: 109 RKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKI 161



to top

>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein|
           At1g12440
          Length = 168

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 35/55 (63%), Positives = 47/55 (85%)
 Frame = -1

Query: 522 KRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 358
           K+VG+TGF CRCG+ +C  HRY + H+CQFD++  AR+AIAKANPVVKA+K+D+I
Sbjct: 114 KKVGVTGFKCRCGSTFCGTHRYPESHECQFDFKGVAREAIAKANPVVKADKVDRI 168



to top

>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = -1

Query: 531 LARKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 358
           + RK+VGLTGF+CRCGN++C LHRYSDKH+C +DY+  A   I K NPVV AEK+ +I
Sbjct: 156 MCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



to top

>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger|
           protein 216)
          Length = 213

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = -1

Query: 531 LARKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 358
           + RK+VGLTGF+CRCGN++C LHRYSDKH+C +DY+  A   I K NPVV AEK+ +I
Sbjct: 156 MCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213



to top

>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein|
           At2g36320
          Length = 161

 Score = 80.9 bits (198), Expect(2) = 1e-15
 Identities = 35/58 (60%), Positives = 43/58 (74%)
 Frame = -1

Query: 531 LARKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 358
           + RKRVGLTGF CRCG  +C  HRY + H C FD+++A R+ IAKANP+V A KL KI
Sbjct: 104 VCRKRVGLTGFMCRCGTTFCGSHRYPEVHGCTFDFKSAGREEIAKANPLVIAAKLQKI 161



 Score = 21.6 bits (44), Expect(2) = 1e-15
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 565 PKRKEGPNRCSTCKE 521
           P   + PNRC+ C++
Sbjct: 93  PSPPQRPNRCTVCRK 107



to top

>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 31/55 (56%), Positives = 44/55 (80%)
 Frame = -1

Query: 522 KRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 358
           K+VG+ GF C+CG+ +C  HRY +KH+C FD++   RDAIAKANP+VKA+K+ +I
Sbjct: 121 KKVGVMGFKCKCGSTFCGSHRYPEKHECSFDFKEVGRDAIAKANPLVKADKVQRI 175



to top

>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog|
          Length = 226

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 22/64 (34%), Positives = 37/64 (57%)
 Frame = -1

Query: 552 RGRIGAQLARKRVGLTGFNCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAE 373
           R +I  +L ++ +G    +CRCG ++C LHR  ++HDC FD+    R+       ++K  
Sbjct: 158 RCQIKLELVQQELG----SCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMV 208

Query: 372 KLDK 361
           KLD+
Sbjct: 209 KLDR 212



to top

>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = -1

Query: 498 NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDK 361
           +CRCG ++C LHR  ++HDC FD+    R+       ++K  KLD+
Sbjct: 173 SCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213



to top

>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = -1

Query: 498 NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDK 361
           +CRCG ++C LHR  ++HDC FD+    R+       ++K  KLD+
Sbjct: 173 SCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213



to top

>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence|
           27)
          Length = 227

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 18/46 (39%), Positives = 28/46 (60%)
 Frame = -1

Query: 498 NCRCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDK 361
           +CRCG ++C LHR  ++HDC FD+    R+       ++K  KLD+
Sbjct: 173 SCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213



to top

>NORQ_PARDE (Q51664) Protein norQ|
          Length = 270

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 370 ARQDLGVL-QGRNGCNLPRFIIHLCCAILAPPFLVGCH 260
           A  DL VL +G  GC   RF+ H+   +  P + V CH
Sbjct: 32  AANDLPVLLKGPTGCGKTRFVAHMAARLGRPLYTVACH 69



to top

>VG40_ICHV1 (Q00145) Hypothetical gene 40 protein|
          Length = 136

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -2

Query: 374 RSSTRFRCPTGKKWLQSAKVHHPSLLCHPCTSLSCWLPHFLNCTAS*CTLRRGS 213
           RS++ F C    + L   ++  PS+    CT+ SCW  H L  +++   +RR S
Sbjct: 26  RSNSWFVCKIVYRCLSPRRIISPSI----CTAFSCWANHGLRLSST-AAMRRSS 74



to top

>ALG2_CANGA (Q6FJJ9) Alpha-1,3-mannosyltransferase ALG2 (EC 2.4.1.-)|
           (GDP-Man:Man(1)GlcNAc(2)-PP-dolichol
           mannosyltransferase) (Asparagine-linked glycosylation
           protein 2)
          Length = 458

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = -1

Query: 492 RCGNMYCSLHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI--*VSYREEMVAICQ 319
           +C N Y S++RY  K + +   +  A+ ++   N VV      +I   V Y +E+  +C+
Sbjct: 215 KCPNFYLSINRYERKKNIELAIQAFAKASVENTNLVVCGGYDPRIHENVQYLQELTCLCK 274



to top

>YVDC_LACLA (Q9CE03) Hypothetical UPF0177 protein yvdC|
          Length = 261

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
 Frame = -1

Query: 375 EKLDKI*VSYREEMVAICQGSSSIFAVPSLHLPFLLAATFPKLYGIVM--HTASWQLQEL 202
           EKL  +   YR  +V I     S  +V   HLPFL+ A    + G++   H + W +  L
Sbjct: 5   EKLQSL-AKYRWVIVIILALLFSALSVSIFHLPFLMTALVLSIVGLIFAYHKSVWLV--L 61

Query: 201 NPLSHSEWFACCV------------TLFMVVFSVSIVASH 118
             LS+    A  +             +F ++F ++I++S+
Sbjct: 62  FILSNLPMLATTIFAYQHHFTTLDTVIFFIIFLLTIISSY 101



to top

>IL17E_HUMAN (Q9H293) Interleukin-17E precursor (IL-17E) (Interleukin-25)|
           (IL-25)
          Length = 177

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 4/31 (12%)
 Frame = +3

Query: 327 LQPFLPCRTPKSCRASLPSPLG----WPWRW 407
           L+P  P R P+SCRAS   PL      PWR+
Sbjct: 62  LEPARPNRHPESCRASEDGPLNSRAISPWRY 92



to top

>PA2X_BUNFA (P14411) Phospholipase A2 isozyme X, basic (EC 3.1.1.4)|
           (Phosphatidylcholine 2-acylhydrolase)
          Length = 118

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
 Frame = +2

Query: 209 CSCHDAVCITM---PYNLGNVAANKKGRCK 289
           C C  A  I     PYNL N   NKK  CK
Sbjct: 89  CDCDRAAAICFAAAPYNLSNFGINKKTHCK 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,972,840
Number of Sequences: 219361
Number of extensions: 2007987
Number of successful extensions: 5797
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5796
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top