ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13m24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 406 ggccgcttgccgtccagatagctggaagcccagaggacgaggaggccgtggtcctcggag 465 |||| |||||||||||| |||||||| ||||| || || ||||| | || |||||||||| Sbjct: 306190 ggcctcttgccgtccaggtagctggacgcccacagcaccaggagccggtcgtcctcggag 306249 Query: 466 aagggcagccggccggagatcacctcgagcagcagtatcccgaacttgta 515 || ||| |||| |||||||||||||| || | |||||||||||||||||| Sbjct: 306250 aatggccgccgcccggagatcacctccagaaccagtatcccgaacttgta 306299 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 550 gccgcgtcggcctcgtcgtccttccaga 577 ||||||||||| |||||||||| ||||| Sbjct: 16748385 gccgcgtcggcgtcgtcgtcctgccaga 16748412
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 406 ggccgcttgccgtccagatagctggaagcccagaggacgaggaggccgtggtcctcggag 465 |||| |||||||||||| |||||||| ||||| || || ||||| | || |||||||||| Sbjct: 306190 ggcctcttgccgtccaggtagctggacgcccacagcaccaggagccggtcgtcctcggag 306249 Query: 466 aagggcagccggccggagatcacctcgagcagcagtatcccgaacttgta 515 || ||| |||| |||||||||||||| || | |||||||||||||||||| Sbjct: 306250 aatggccgccgcccggagatcacctccagaaccagtatcccgaacttgta 306299 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 550 gccgcgtcggcctcgtcgtccttccaga 577 ||||||||||| |||||||||| ||||| Sbjct: 16701618 gccgcgtcggcgtcgtcgtcctgccaga 16701645
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Plus Query: 406 ggccgcttgccgtccagatagctggaagcccagaggacgaggaggccgtggtcctcggag 465 |||| |||||||||||| |||||||| ||||| || || ||||| | || |||||||||| Sbjct: 39241 ggcctcttgccgtccaggtagctggacgcccacagcaccaggagccggtcgtcctcggag 39300 Query: 466 aagggcagccggccggagatcacctcgagcagcagtatcccgaacttgta 515 || ||| |||| |||||||||||||| || | |||||||||||||||||| Sbjct: 39301 aatggccgccgcccggagatcacctccagaaccagtatcccgaacttgta 39350
>dbj|AK070979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073D05, full insert sequence Length = 2482 Score = 91.7 bits (46), Expect = 3e-15 Identities = 94/110 (85%) Strand = Plus / Minus Query: 406 ggccgcttgccgtccagatagctggaagcccagaggacgaggaggccgtggtcctcggag 465 |||| |||||||||||| |||||||| ||||| || || ||||| | || |||||||||| Sbjct: 1844 ggcctcttgccgtccaggtagctggacgcccacagcaccaggagccggtcgtcctcggag 1785 Query: 466 aagggcagccggccggagatcacctcgagcagcagtatcccgaacttgta 515 || ||| |||| |||||||||||||| || | ||||| |||||||||||| Sbjct: 1784 aatggccgccgcccggagatcacctccagaaccagtaccccgaacttgta 1735
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 ggacataatctcgagctcagcccaccacagcgg 212 |||||| ||||| |||||||||||||||||||| Sbjct: 10264601 ggacatgatctccagctcagcccaccacagcgg 10264633
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 ggacataatctcgagctcagcccaccacagcgg 212 |||||| ||||| |||||||||||||||||||| Sbjct: 126014 ggacatgatctccagctcagcccaccacagcgg 126046
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 180 ggacataatctcgagctcagcccaccacagcgg 212 |||||| ||||| |||||||||||||||||||| Sbjct: 10262702 ggacatgatctccagctcagcccaccacagcgg 10262734
>dbj|AK066380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059L17, full insert sequence Length = 1969 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 180 ggacataatctcgagctcagcccaccacagcgg 212 |||||| ||||| |||||||||||||||||||| Sbjct: 1644 ggacatgatctccagctcagcccaccacagcgg 1612
>dbj|AK061955.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F07, full insert sequence Length = 1740 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 180 ggacataatctcgagctcagcccaccacagcgg 212 |||||| ||||| |||||||||||||||||||| Sbjct: 1436 ggacatgatctccagctcagcccaccacagcgg 1404
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 255 gcccttcatcagcccggcgacctcgccc 282 ||||||||||||| |||||||||||||| Sbjct: 503089 gcccttcatcagcgcggcgacctcgccc 503116 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 cggcgccgcgtcggcctcgt 565 |||||||||||||||||||| Sbjct: 2307100 cggcgccgcgtcggcctcgt 2307119
>ref|XM_507394.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.112 mRNA Length = 1779 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 270 cggcgcctcctcggcctcgtcgtcgttccagaact 236
>ref|XM_479182.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1779 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 270 cggcgcctcctcggcctcgtcgtcgttccagaact 236
>ref|XM_506477.2| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.112 mRNA Length = 1786 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 318 cggcgcctcctcggcctcgtcgtcgttccagaact 284
>ref|XM_760161.1| Theileria parva strain Muguga hypothetical protein (TP02_0688) partial mRNA Length = 1740 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 62 gagtgtaccatatcatacaaaaa 84 ||||||||||||||||||||||| Sbjct: 1361 gagtgtaccatatcatacaaaaa 1339
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 386 ggtcggccatcgagccgatcggc 408 ||||||||||||||||||||||| Sbjct: 100762 ggtcggccatcgagccgatcggc 100740
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 25587731 cggcgcctcctcggcctcgtcgtcgttccagaact 25587697
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 41704 cggcgcctcctcggcctcgtcgtcgttccagaact 41670
>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0560B08 Length = 128098 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 125001 cggcgcctcctcggcctcgtcgtcgttccagaact 124967
>dbj|AK119518.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-C09, full insert sequence Length = 1742 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 272 cggcgcctcctcggcctcgtcgtcgttccagaact 238
>dbj|AK099150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061O07, full insert sequence Length = 1735 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 269 cggcgcctcctcggcctcgtcgtcgttccagaact 235
>dbj|AK099000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101H15, full insert sequence Length = 1778 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 269 cggcgcctcctcggcctcgtcgtcgttccagaact 235
>dbj|AK059588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-C04, full insert sequence Length = 1786 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 546 cggcgccgcgtcggcctcgtcgtccttccagaact 580 ||||||| | |||||||||||||| |||||||||| Sbjct: 318 cggcgcctcctcggcctcgtcgtcgttccagaact 284
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 386 ggtcggccatcgagccgatcgg 407 |||||||||||||||||||||| Sbjct: 2952116 ggtcggccatcgagccgatcgg 2952137
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 535 gcggatcgcgtcggcgccgcg 555 ||||||||||||||||||||| Sbjct: 2930539 gcggatcgcgtcggcgccgcg 2930559
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 403 atcggccgcttgccgtccaga 423 ||||||||||||||||||||| Sbjct: 1910872 atcggccgcttgccgtccaga 1910892
>gb|AC124142.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0015A05, complete sequence Length = 127330 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 gacgaggaggccgtggtcctc 461 ||||||||||||||||||||| Sbjct: 81369 gacgaggaggccgtggtcctc 81349
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 gacgaggaggccgtggtcctc 461 ||||||||||||||||||||| Sbjct: 43003 gacgaggaggccgtggtcctc 42983
>gb|AC140492.3| Mus musculus BAC clone RP24-137B3 from chromosome 5, complete sequence Length = 157199 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 aaggacaaaaacaaatttaaa 54 ||||||||||||||||||||| Sbjct: 126733 aaggacaaaaacaaatttaaa 126753
>ref|XM_645126.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (236.t00005) partial mRNA Length = 3747 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 aaaagtaacgaagaagaaactaaaa 106 |||| |||||||||||||||||||| Sbjct: 625 aaaattaacgaagaagaaactaaaa 649
>gb|AC164702.2| Mus musculus BAC clone RP23-402H19 from chromosome 10, complete sequence Length = 208221 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 aagaagaaactaaaatgcaaa 112 ||||||||||||||||||||| Sbjct: 175229 aagaagaaactaaaatgcaaa 175249
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 549 cgccgcgtcggcctcgtcgtccttc 573 |||||||||||| |||||||||||| Sbjct: 3302715 cgccgcgtcggcgtcgtcgtccttc 3302739
>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147859 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 gaagaagaaactaaaatgcaa 111 ||||||||||||||||||||| Sbjct: 129194 gaagaagaaactaaaatgcaa 129174
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 gacgaggaggccgtggtcctc 461 ||||||||||||||||||||| Sbjct: 2596483 gacgaggaggccgtggtcctc 2596463
>gb|AC102534.10| Mus musculus chromosome 8, clone RP23-57G23, complete sequence Length = 223998 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 caaaaacaaatttaaaccaaaagga 63 |||||||||||||||| |||||||| Sbjct: 173980 caaaaacaaatttaaaacaaaagga 173956
>gb|AC161499.2| Mus musculus chromosome 5, clone RP24-334E1, complete sequence Length = 163642 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 aaggacaaaaacaaatttaaa 54 ||||||||||||||||||||| Sbjct: 135055 aaggacaaaaacaaatttaaa 135075
>gb|AC153357.4| Mus musculus BAC clone RP24-124N8 from chromosome 10, complete sequence Length = 189789 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaaaagtaacgaagaagaa 99 |||||||||||||||||||| Sbjct: 143603 aaaaaagtaacgaagaagaa 143622
>ref|NM_188349.1| Oryza sativa (japonica cultivar-group), Ozsa8100 predicted mRNA Length = 2034 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 atctcgagctcagcccacca 206 |||||||||||||||||||| Sbjct: 2012 atctcgagctcagcccacca 1993
>gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complete genome Length = 2401520 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 aaacaaatttaaaccaaaag 61 |||||||||||||||||||| Sbjct: 87320 aaacaaatttaaaccaaaag 87301
>ref|NM_197375.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0076F20.21), mRNA Length = 1200 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 471 cagccggccggagatcacctcgagcagc 498 ||||||||||| |||| ||||||||||| Sbjct: 63 cagccggccggcgatctcctcgagcagc 36
>gb|AY146587.1| Triticum turgidum subsp. durum BAC 107G22, complete sequence Length = 142018 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 taccatatcatacaaaaaag 86 |||||||||||||||||||| Sbjct: 105744 taccatatcatacaaaaaag 105763
>gb|AC145882.3| Pan troglodytes BAC clone RP43-7E19 from 7, complete sequence Length = 197080 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 12531 aaaacaaatttaaaccaaaa 12512
>ref|XM_587630.2| PREDICTED: Bos taurus similar to Zinc finger protein 500 (LOC510490), mRNA Length = 2176 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 gaggaggccgtggtcctcggagaagggc 471 ||||||||||||||||||| ||||||| Sbjct: 652 gaggaggccgtggtcctcgtggaagggc 679
>ref|NM_021646.1| Homo sapiens zinc finger protein 500 (ZNF500), mRNA Length = 3252 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 gaggaggccgtggtcctcggagaagggc 471 ||||||||||||||||||| ||||||| Sbjct: 602 gaggaggccgtggtcctcgtggaagggc 629
>gb|AC141077.2| Homo sapiens chromosome 16 clone RP11-799N4, complete sequence Length = 168332 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 20371 aaaacaaatttaaaccaaaa 20352
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 gcccttcatcagcccggcgacctcgccc 282 ||||||||||||| ||||||| |||||| Sbjct: 1325241 gcccttcatcagcgcggcgacttcgccc 1325214
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 atcggccgcttgccgtccag 422 |||||||||||||||||||| Sbjct: 2126079 atcggccgcttgccgtccag 2126098
>gb|AC131656.3| Mus musculus BAC clone RP23-233K19 from chromosome 17, complete sequence Length = 184763 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gtgtaccatatcatacaaaa 83 |||||||||||||||||||| Sbjct: 97402 gtgtaccatatcatacaaaa 97421
>gb|BC088531.1| Xenopus tropicalis cysteinyl-tRNA synthetase, mRNA (cDNA clone MGC:97657 IMAGE:6980798), complete cds Length = 2521 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 cgtccttccagaactcggtgtccg 589 |||||||||||||||||| ||||| Sbjct: 1888 cgtccttccagaactcggcgtccg 1911
>gb|AC004992.2| Homo sapiens PAC clone RP5-1189K17 from 7, complete sequence Length = 92869 Score = 40.1 bits (20), Expect = 8.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 23 acagagnatccaaggacaaaaac 45 |||||| |||||||||||||||| Sbjct: 38570 acagagaatccaaggacaaaaac 38548
>gb|AC141257.2| Homo sapiens chromosome 16 clone RP11-1277H1, complete sequence Length = 127816 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 114609 aaaacaaatttaaaccaaaa 114628 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 58070 aaaacaaatttaaaccaaaa 58089
>gb|BC014054.2| Homo sapiens zinc finger protein 500, mRNA (cDNA clone IMAGE:3629558), partial cds Length = 2939 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 gaggaggccgtggtcctcggagaagggc 471 ||||||||||||||||||| ||||||| Sbjct: 270 gaggaggccgtggtcctcgtggaagggc 297
>emb|CT010544.2| Xenopus tropicalis finished cDNA, clone TNeu055j06 Length = 2760 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 cgtccttccagaactcggtgtccg 589 |||||||||||||||||| ||||| Sbjct: 2136 cgtccttccagaactcggcgtccg 2159
>gb|AC007908.4| Homo sapiens chromosome 16 clone RP11-499D5, complete sequence Length = 214110 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 198648 aaaacaaatttaaaccaaaa 198667
>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence Length = 166928 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 123277 aaaacaaatttaaaccaaaa 123258
>emb|AJ243916.1|DME243916 Drosophila melanogaster Domina gene, exons 1-3 Length = 16147 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 15160 gacaaaaacaaattgaaaccaaaa 15183
>emb|AJ243814.1|DME243814 Drosophila melanogaster mRNA for DOMINA protein (Domina gene) Length = 3887 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 3839 gacaaaaacaaattgaaaccaaaa 3862
>ref|XM_547143.2| PREDICTED: Canis familiaris similar to Zinc finger protein 500 (LOC490023), mRNA Length = 1533 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 gaggaggccgtggtcctcggagaagggc 471 ||||||||||||||||||| ||||||| Sbjct: 499 gaggaggccgtggtcctcgtggaagggc 526
>emb|AL591367.5| Human DNA sequence from clone RP11-805H4 on chromosome X Contains the 3' end of the CCNB3 gene for cyclin B3 and a novel gene, complete sequence Length = 96398 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 568 tccttccagaactcggtgtccgag 591 |||||||| ||||||||||||||| Sbjct: 36513 tccttccacaactcggtgtccgag 36490
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 478 ccggagatcacctcgagcagcagt 501 |||||||||| ||||||||||||| Sbjct: 1942520 ccggagatcagctcgagcagcagt 1942497
>emb|AL358552.19| Human DNA sequence from clone RP11-10O5 on chromosome 10, complete sequence Length = 164142 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 568 tccttccagaactcggtgtccgag 591 |||||||| ||||||||||||||| Sbjct: 42204 tccttccacaactcggtgtccgag 42181
>gb|AY332472.1| Oryza sativa (japonica cultivar-group) transmembrane kinase (PK1) mRNA, complete cds Length = 2238 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 atctcgagctcagcccacca 206 |||||||||||||||||||| Sbjct: 2089 atctcgagctcagcccacca 2070
>ref|NM_001011365.1| Xenopus tropicalis cysteinyl-tRNA synthetase (cars), mRNA Length = 2521 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 cgtccttccagaactcggtgtccg 589 |||||||||||||||||| ||||| Sbjct: 1888 cgtccttccagaactcggcgtccg 1911
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 255 gcccttcatcagcccggcgacctcgccc 282 ||||||||||||| ||||||| |||||| Sbjct: 2642647 gcccttcatcagcgcggcgacttcgccc 2642620
>emb|AL009192.1|DMC133E12 Drosophila melanogaster cosmid clone 133E12 Length = 32000 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 29569 gccggagatcacctccagcagcag 29592
>emb|AJ308233.1|TNI308233 Tetraodon nigroviridis aw502783-like gene (partial), af290615-like gene, ak000823-like gene, vav-3 gene, amylase-1 gene, amylase-2 gene and amylase-3 gene Length = 148106 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 aagaaactaaaatgcaaaat 114 |||||||||||||||||||| Sbjct: 66482 aagaaactaaaatgcaaaat 66463
>gb|AC022746.10| Homo sapiens chromosome 10, clone RP11-567F2, complete sequence Length = 168998 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 568 tccttccagaactcggtgtccgag 591 |||||||| ||||||||||||||| Sbjct: 119669 tccttccacaactcggtgtccgag 119692
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 138277 gccggagatcacctccagcagcag 138300
>gb|AC007882.3| Homo sapiens BAC clone RP11-499D5 from 16, complete sequence Length = 214025 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 15379 aaaacaaatttaaaccaaaa 15360
>ref|NM_166920.1| Drosophila melanogaster actinin CG4376-RB, transcript variant B (Actn), mRNA Length = 3533 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 629 gccggagatcacctccagcagcag 606
>ref|NM_079578.2| Drosophila melanogaster jumeau CG4029-RA (jumu), mRNA Length = 3867 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 3839 gacaaaaacaaattgaaaccaaaa 3862
>gb|AC107023.4| Homo sapiens 12 BAC RP11-115F18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150353 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 aggacaaaaacaaatttaaa 54 |||||||||||||||||||| Sbjct: 81684 aggacaaaaacaaatttaaa 81665
>ref|NM_058137.3| Drosophila melanogaster actinin CG4376-RC, transcript variant C (Actn), mRNA Length = 3599 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 629 gccggagatcacctccagcagcag 606
>ref|NM_058136.3| Drosophila melanogaster actinin CG4376-RA, transcript variant A (Actn), mRNA Length = 3533 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 629 gccggagatcacctccagcagcag 606
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 4702 gccggagatcacctccagcagcag 4725
>gb|AY069615.1| Drosophila melanogaster LD37956 full length cDNA Length = 3444 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 542 gccggagatcacctccagcagcag 519
>gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86A-86A, BAC clone BACR03L12, complete sequence Length = 190672 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 95894 gacaaaaacaaattgaaaccaaaa 95917
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 471 cagccggccggagatcacctcgagcagc 498 ||||||||||| |||| ||||||||||| Sbjct: 154879 cagccggccggcgatctcctcgagcagc 154906
>dbj|AK038099.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130078K15 product:unclassifiable, full insert sequence Length = 2520 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gtgtaccatatcatacaaaa 83 |||||||||||||||||||| Sbjct: 2481 gtgtaccatatcatacaaaa 2462
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 255 gcccttcatcagcccggcgacctcgccc 282 ||||||||||||| ||||||| |||||| Sbjct: 117571 gcccttcatcagcgcggcgacttcgccc 117598
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 531 gcctgcggatcgcgtcggcgccgc 554 |||||||||||| ||||||||||| Sbjct: 819623 gcctgcggatcgtgtcggcgccgc 819646
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 471 cagccggccggagatcacctcgagcagc 498 ||||||||||| |||| ||||||||||| Sbjct: 19527013 cagccggccggcgatctcctcgagcagc 19527040
>gb|AC139476.3| Homo sapiens chromosome 16 clone RP11-341P6, complete sequence Length = 189057 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 1824 aaaacaaatttaaaccaaaa 1843
>gb|AC133551.3| Homo sapiens chromosome 16 clone RP11-261D10, complete sequence Length = 40861 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 35560 aaaacaaatttaaaccaaaa 35579
>gb|AC133548.2| Homo sapiens chromosome 16 clone RP11-17M15, complete sequence Length = 106288 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 105721 aaaacaaatttaaaccaaaa 105702
>gb|AC009091.9| Homo sapiens chromosome 16 clone RP11-408D2, complete sequence Length = 156273 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 155706 aaaacaaatttaaaccaaaa 155687
>gb|AC140878.2| Homo sapiens chromosome 16 clone RP11-1292F20, complete sequence Length = 124514 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 13244 aaaacaaatttaaaccaaaa 13225
>gb|AC020761.6| Homo sapiens chromosome 16 clone RP11-151M15, complete sequence Length = 101746 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 67616 aaaacaaatttaaaccaaaa 67597 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 13322 aaaacaaatttaaaccaaaa 13303
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tcggcgccgcgtcggcctcg 564 |||||||||||||||||||| Sbjct: 39430473 tcggcgccgcgtcggcctcg 39430492 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 atctcgagctcagcccacca 206 |||||||||||||||||||| Sbjct: 5814109 atctcgagctcagcccacca 5814128
>gb|AC138907.2| Homo sapiens chromosome 16 clone RP11-586K12, complete sequence Length = 177793 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 143013 aaaacaaatttaaaccaaaa 143032
>gb|AC157532.2| Pan troglodytes BAC clone CH251-305A6 from chromosome unknown, complete sequence Length = 204179 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aggacaaaaacaaatttaaa 54 |||||||||||||||||||| Sbjct: 133931 aggacaaaaacaaatttaaa 133950
>gb|AC157528.2| Pan troglodytes BAC clone CH251-422M6 from chromosome unknown, complete sequence Length = 154857 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 aggacaaaaacaaatttaaa 54 |||||||||||||||||||| Sbjct: 35090 aggacaaaaacaaatttaaa 35109
>gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, complete sequence Length = 185339 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 65114 aaaacaaatttaaaccaaaa 65133
>gb|AC118061.4| Homo sapiens BAC clone RP11-318L9 from 2, complete sequence Length = 19360 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gaagaagaaactaaaatgca 110 |||||||||||||||||||| Sbjct: 12336 gaagaagaaactaaaatgca 12355
>gb|AC136944.3| Homo sapiens chromosome 16 clone RP11-23E10, complete sequence Length = 142696 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 35564 aaaacaaatttaaaccaaaa 35583
>gb|AC138869.2| Homo sapiens chromosome 16 clone RP11-1437A8, complete sequence Length = 184293 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 2011 aaaacaaatttaaaccaaaa 1992
>gb|AF264033.1|AF264033 Drosophila melanogaster winged-helix protein jumeaux mRNA, complete cds Length = 3864 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 3836 gacaaaaacaaattgaaaccaaaa 3859
>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence Length = 221622 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 34247 aaaacaaatttaaaccaaaa 34266
>dbj|AP006531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1417F08 Length = 155536 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 tcggcgccgcgtcggcctcg 564 |||||||||||||||||||| Sbjct: 5487 tcggcgccgcgtcggcctcg 5506
>gb|AC136425.3| Homo sapiens chromosome 16 clone CTA-117G4, complete sequence Length = 173621 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 166583 aaaacaaatttaaaccaaaa 166602
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 atctcgagctcagcccacca 206 |||||||||||||||||||| Sbjct: 17850 atctcgagctcagcccacca 17869
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 atctcgagctcagcccacca 206 |||||||||||||||||||| Sbjct: 138811 atctcgagctcagcccacca 138830
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cgggcaccggcgacgacgcc 375 |||||||||||||||||||| Sbjct: 5809170 cgggcaccggcgacgacgcc 5809189
>gb|U91320.1|HSU91320 Human chromosome 16p13 BAC clone CIT987SK-3H8 complete sequence Length = 70048 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 39122 aaaacaaatttaaaccaaaa 39103
>dbj|AK100525.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100P17, full insert sequence Length = 2788 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 atctcgagctcagcccacca 206 |||||||||||||||||||| Sbjct: 2506 atctcgagctcagcccacca 2487
>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence Length = 223470 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 aaaaaagtaacgaagaagaa 99 |||||||||||||||||||| Sbjct: 80826 aaaaaagtaacgaagaagaa 80845
>emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in linkage group 18, complete sequence Length = 145468 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 catatcatacaaaaaagtaa 89 |||||||||||||||||||| Sbjct: 107999 catatcatacaaaaaagtaa 107980
>gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24 of 118 of the complete sequence Length = 223505 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 200230 gacaaaaacaaattgaaaccaaaa 200253
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete sequence Length = 300933 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 gccggagatcacctcgagcagcag 500 ||||||||||||||| |||||||| Sbjct: 265254 gccggagatcacctccagcagcag 265277
>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence Length = 182046 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaacaaatttaaaccaaaa 60 |||||||||||||||||||| Sbjct: 181832 aaaacaaatttaaaccaaaa 181813
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 gcgccgcgtcggcctcgtcg 567 |||||||||||||||||||| Sbjct: 2354430 gcgccgcgtcggcctcgtcg 2354411
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 471 cagccggccggagatcacctcgagcagc 498 ||||||||||| |||| ||||||||||| Sbjct: 19538289 cagccggccggcgatctcctcgagcagc 19538316
>emb|AL954841.10| Zebrafish DNA sequence from clone DKEY-3B8, complete sequence Length = 149277 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 catatcatacaaaaaagtaa 89 |||||||||||||||||||| Sbjct: 124276 catatcatacaaaaaagtaa 124295
>emb|AL935068.5|CNS08CCK Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0088J13 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116974 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 550 gccgcgtcggcctcgtcgtccttccaga 577 ||||||||||| |||||||||| ||||| Sbjct: 37016 gccgcgtcggcgtcgtcgtcctgccaga 36989
>gb|AC122507.5| Mus musculus BAC clone RP24-426K19 from 12, complete sequence Length = 188715 Score = 40.1 bits (20), Expect = 8.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 63 agtgtaccatatcatacaaaaaagtaac 90 |||||||||||||| ||||||||||||| Sbjct: 141954 agtgtaccatatca-acaaaaaagtaac 141980
>dbj|AB028890.1| Drosophila melanogaster Dwhn mRNA for Winged-helix nude transcription factor, complete cds Length = 3887 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 37 gacaaaaacaaatttaaaccaaaa 60 |||||||||||||| ||||||||| Sbjct: 3840 gacaaaaacaaattgaaaccaaaa 3863
>dbj|AB011129.1| Homo sapiens mRNA for KIAA0557 protein, partial cds Length = 5627 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 444 gaggaggccgtggtcctcggagaagggc 471 ||||||||||||||||||| ||||||| Sbjct: 395 gaggaggccgtggtcctcgtggaagggc 422 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,077,834 Number of Sequences: 3902068 Number of extensions: 5077834 Number of successful extensions: 108821 Number of sequences better than 10.0: 116 Number of HSP's better than 10.0 without gapping: 118 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 106602 Number of HSP's gapped (non-prelim): 2221 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
