| Clone Name | rbasd13m11 |
|---|---|
| Clone Library Name | barley_pub |
>RS4_MAIZE (O22424) 40S ribosomal protein S4| Length = 265 Score = 176 bits (445), Expect = 4e-44 Identities = 87/111 (78%), Positives = 92/111 (82%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIKANDTIK+DLETNKIVDFIKFD VIKNREKHKG+F Sbjct: 146 TIRYPDPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKRD 183 ETIHVED+ GHQFATR+GNVFTIGKG KPWVSLPKGKGIKL+IIEEQRKRD Sbjct: 206 ETIHVEDSLGHQFATRMGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRD 256
>RS4_SOLTU (P46300) 40S ribosomal protein S4| Length = 264 Score = 171 bits (434), Expect = 8e-43 Identities = 83/110 (75%), Positives = 92/110 (83%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIKANDTIKLDLE+NKIVDFIKFD VIKNREKHKG+F Sbjct: 146 TIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 ET+H++D+QGH+FATRLGNVFT+GKGTKPWVSLPKGKGIKLTIIE+ RKR Sbjct: 206 ETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLTIIEDARKR 255
>RS4_PRUAR (O81363) 40S ribosomal protein S4| Length = 261 Score = 171 bits (434), Expect = 8e-43 Identities = 85/110 (77%), Positives = 90/110 (81%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIKANDTIKLDLETNKI DFIKFD VIKNREKHKG+F Sbjct: 142 TIRYPDPLIKANDTIKLDLETNKITDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 201 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 ETIHV+DA GH+FATRLGNVFTIGKGTKPWVSLPKGKGIKLTI+EE +KR Sbjct: 202 ETIHVQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLTILEEAKKR 251
>RS4_GOSHI (P46299) 40S ribosomal protein S4| Length = 262 Score = 169 bits (427), Expect = 5e-42 Identities = 85/110 (77%), Positives = 90/110 (81%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIKANDTIKLDLE+NKIVDFIKFD VIKNREKHKG+F Sbjct: 146 TIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 ETIHV+DA GH+FATRLGNVFTIGKGTKPWVSLPK KGIKL+IIEE RKR Sbjct: 206 ETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKRKGIKLSIIEEARKR 255
>RS4_ARATH (P49204) 40S ribosomal protein S4| Length = 262 Score = 166 bits (421), Expect = 3e-41 Identities = 82/110 (74%), Positives = 89/110 (80%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTIKLDLE NKIV+FIKFD VIKNREKHKG+F Sbjct: 146 TIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 ETIH++D+ GH+FATRLGNV+TIGKGTKPWVSLPKGKGIKLTIIEE RKR Sbjct: 206 ETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKR 255
>RS4X_MONDO (O62738) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (359), Expect = 4e-34 Identities = 68/110 (61%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NREKH G+F Sbjct: 145 TIRYPDPLIKMNDTIQIDLETGKITDFIKFDTGNMCMVTGGANLGRIGVITNREKHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENTR (Q6PBC4) 40S ribosomal protein S4| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_XENLA (P49401) 40S ribosomal protein S4| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNNFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CRIGR (P47961) 40S ribosomal protein S4| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_CHICK (P47836) 40S ribosomal protein S4| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_RAT (P62703) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MOUSE (P62702) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MESAU (P62704) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_MACFU (Q76MY1) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_HUMAN (P62701) 40S ribosomal protein S4, X isoform (Single copy abundant| mRNA protein) (SCR10) Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_FELCA (P62705) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_CERAE (Q76N24) 40S ribosomal protein S4, X isoform| Length = 262 Score = 142 bits (357), Expect = 7e-34 Identities = 67/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_MONDO (O62739) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 140 bits (354), Expect = 2e-33 Identities = 66/110 (60%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDT++++LET KI DFIKFD VI NREKH G+F Sbjct: 145 TIRYPDPLIKVNDTVQINLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNREKHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IGKG KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4X_BRARE (Q642H9) 40S ribosomal protein S4, X isoform| Length = 262 Score = 138 bits (348), Expect = 8e-33 Identities = 65/110 (59%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DL+T KI DFIKF+ VI NREKH G+F Sbjct: 145 TIRYPDPLIKVNDTIRIDLDTGKITDFIKFETGNMCMVTGGANLGRIGVITNREKHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+D+ G+ FATRL N+F IGKG KPWVSLP+GKG++LTI EE+ KR Sbjct: 205 DVVHVKDSIGNSFATRLSNIFVIGKGNKPWVSLPRGKGVRLTIAEERDKR 254
>RS4_ICTPU (Q90YS0) 40S ribosomal protein S4| Length = 262 Score = 136 bits (342), Expect = 4e-32 Identities = 63/110 (57%), Positives = 80/110 (72%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP+IKANDT+++DLET KI +FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPMIKANDTVRIDLETGKITEFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+D+ G+ FATRL N+F IGKG K WVS+P+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDSTGNSFATRLSNIFVIGKGNKAWVSIPRGKGIRLTIAEERDKR 254
>RS4Y1_PONPY (Q861U7) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 135 bits (339), Expect = 9e-32 Identities = 62/110 (56%), Positives = 79/110 (71%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDT+++DL T KI++FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPLIKVNDTVQIDLGTGKIINFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y1_HUMAN (P22090) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 134 bits (337), Expect = 1e-31 Identities = 61/110 (55%), Positives = 79/110 (71%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP+IK NDT+++DL T KI++FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4Y1_GORGO (Q861U8) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 133 bits (335), Expect = 3e-31 Identities = 60/110 (54%), Positives = 79/110 (71%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP+IK NDT+++DL T KI++FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LT+ EE+ KR Sbjct: 205 DVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTVAEERDKR 254
>RS4_ORYSA (P49398) 40S ribosomal protein S4 (SCAR protein SS620)| Length = 268 Score = 96.7 bits (239), Expect(2) = 4e-31 Identities = 45/49 (91%), Positives = 47/49 (95%) Frame = -1 Query: 347 KGTFETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIE 201 KG+FETIHVEDA GHQFATRLGNVFTIGKG KPWVSLPKGKGIKL+IIE Sbjct: 205 KGSFETIHVEDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIE 253 Score = 57.4 bits (137), Expect(2) = 4e-31 Identities = 29/54 (53%), Positives = 36/54 (66%) Frame = -3 Query: 501 RPTHQGQRHHQARPGDQQDC*LHQVXXXXXRHGDWWAQHWACWCDQEQGEA*GN 340 RPT G+RH+Q R GDQQ+ LHQ HGD W ++ A WCDQ+QGEA G+ Sbjct: 156 RPT-SGKRHNQDRSGDQQELRLHQGLMLAMCHGD-WRRNTAVWCDQQQGEAKGS 207
>RS4Y1_PANTR (Q861U9) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 132 bits (331), Expect = 7e-31 Identities = 60/110 (54%), Positives = 78/110 (70%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP+IK NDT+++DL T KI++FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y1_PANPA (Q861V0) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 132 bits (331), Expect = 7e-31 Identities = 60/110 (54%), Positives = 78/110 (70%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP+IK NDT+++DL T KI++FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATRL N+F IG G KPW+SLP+GKGI+LT+ E+ KR Sbjct: 205 DVVHVKDANGNSFATRLSNIFVIGNGNKPWISLPRGKGIRLTVAAERDKR 254
>RS4Y1_MACFU (P79183) 40S ribosomal protein S4, Y isoform 1| Length = 262 Score = 131 bits (329), Expect = 1e-30 Identities = 60/110 (54%), Positives = 77/110 (70%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP+IK NDT+++DL + KI FIKFD VI NRE+H G+F Sbjct: 145 TIRYPDPVIKVNDTVRIDLGSGKITSFIKFDTGNVCMVIGGANLGRVGVITNRERHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDASGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4Y2_HUMAN (Q8TD47) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 130 bits (328), Expect = 2e-30 Identities = 61/110 (55%), Positives = 76/110 (69%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDT+++DL T KI FIKFD VI NRE+H G+ Sbjct: 145 TIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPGSC 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4_DROME (P41042) 40S ribosomal protein S4| Length = 261 Score = 130 bits (327), Expect = 2e-30 Identities = 59/110 (53%), Positives = 79/110 (71%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLI AND++++D+ + KI D+IKFD + NRE+H G+F Sbjct: 146 TIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +H++D+QGH FATRL NVF IGKG KP++SLPKGKG+KL+I EE+ KR Sbjct: 206 DIVHIKDSQGHVFATRLTNVFIIGKGNKPYISLPKGKGVKLSIAEERDKR 255
>RS4Y2_PANTR (Q6GVM7) 40S ribosomal protein S4, Y isoform 2| Length = 262 Score = 130 bits (326), Expect = 3e-30 Identities = 60/110 (54%), Positives = 76/110 (69%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDT+++DL T KI FIKFD V+ NRE+H G+ Sbjct: 145 TIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIGGANLGRVGVVTNRERHPGSC 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +HV+DA G+ FATR+ N+F IG G KPW+SLP+GKGI+LTI EE+ KR Sbjct: 205 DVVHVKDANGNSFATRISNIFVIGNGNKPWISLPRGKGIRLTIAEERDKR 254
>RS4B_SCHPO (Q9USW5) 40S ribosomal protein S4-B| Length = 262 Score = 129 bits (323), Expect = 6e-30 Identities = 64/110 (58%), Positives = 75/110 (68%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTIKL+LETNKI FIKFD I +RE H G+F Sbjct: 146 TIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 E IHV+DA +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 206 EIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRR 255
>RS4C_SCHPO (Q9P4W9) 40S ribosomal protein S4-C| Length = 262 Score = 128 bits (321), Expect = 1e-29 Identities = 64/110 (58%), Positives = 75/110 (68%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTIKL+LETNKI FIKFD I +RE H G+F Sbjct: 146 TIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 E IHV+DA +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 206 EIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255
>RS4A_SCHPO (P87158) 40S ribosomal protein S4-A| Length = 262 Score = 128 bits (321), Expect = 1e-29 Identities = 64/110 (58%), Positives = 75/110 (68%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTIKL+LETNKI FIKFD I +RE H G+F Sbjct: 146 TIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 E IHV+DA +FATRL NVF IG+ K W+SLPKGKG+KL+I EE+ +R Sbjct: 206 EIIHVKDALDREFATRLSNVFVIGETGKSWISLPKGKGVKLSITEERDRR 255
>RS4_YARLI (O59950) 40S ribosomal protein S4 (S7)| Length = 260 Score = 119 bits (298), Expect = 5e-27 Identities = 57/110 (51%), Positives = 73/110 (66%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDT+K+DL T KI F+KF+ I +RE+H+G F Sbjct: 146 TIRYPDPLIKVNDTVKIDLATGKITSFVKFENGNIVMTTGGRNMGRVGTITHRERHEGGF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +H++DA +QF TRL NVF IG+G K +SLPKGKGIKL+I EE+ R Sbjct: 206 DIVHIKDALDNQFVTRLTNVFVIGEGNKSLISLPKGKGIKLSIAEERDAR 255
>RS4_CANAL (P47837) 40S ribosomal protein S4 (S7)| Length = 262 Score = 117 bits (292), Expect = 2e-26 Identities = 61/111 (54%), Positives = 75/111 (67%), Gaps = 1/111 (0%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLI+ANDT+K+DL T KI FIKFD VI +REK +G F Sbjct: 146 TIRYPDPLIRANDTVKIDLATGKIXSFIKFDTGRLVMVTGGRNLGRVGVIVHREKLEGGF 205 Query: 335 ETIHVEDAQGHQFATRLGNVFTIG-KGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +H++DA + F TRL NVF IG + KPWVSLPKGKGIKL+I EE+ +R Sbjct: 206 DLVHIKDALENTFVTRLSNVFVIGTEAGKPWVSLPKGKGIKLSISEERDRR 256
>RS4_YEAST (P05753) 40S ribosomal protein S4 (S7) (YS6) (RP5)| Length = 260 Score = 116 bits (290), Expect = 4e-26 Identities = 55/110 (50%), Positives = 73/110 (66%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP IK NDT+K+DL + KI DFIKFD I ++E+H G F Sbjct: 145 TIRYPDPNIKVNDTVKIDLASGKITDFIKFDAGKLVYVTGGRNLGRIGTIVHKERHDGGF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + +H++D+ + F TRL NVF IG+ KP++SLPKGKGIKL+I EE+ +R Sbjct: 205 DLVHIKDSLDNTFVTRLNNVFVIGEQGKPYISLPKGKGIKLSIAEERDRR 254
>RS4_DICDI (P51405) 40S ribosomal protein S4| Length = 266 Score = 107 bits (266), Expect = 3e-23 Identities = 50/107 (46%), Positives = 69/107 (64%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP I +DTIK+D+E+ KI FI F+ + +REKH G+F Sbjct: 145 TIRYPDPAISIHDTIKIDIESGKITAFIPFEVNNLCMIVGGHNLGRVGAVTHREKHPGSF 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQ 195 + +HV D GHQFATRL NVF IGK ++ +VSLP GKG++ + ++E+ Sbjct: 205 DIVHVTDTAGHQFATRLSNVFIIGKASQTFVSLPAGKGVRRSRVDER 251
>RS4_CAEEL (Q9N3X2) 40S ribosomal protein S4| Length = 259 Score = 104 bits (260), Expect = 1e-22 Identities = 52/110 (47%), Positives = 68/110 (61%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDP +K NDTI ++ T KI D +KF+ +I +RE+ G Sbjct: 145 TIRYPDPHVKVNDTIVFNISTQKITDSVKFEPGNLAYVTGGRNVGRVGIIGHRERLPGAS 204 Query: 335 ETIHVEDAQGHQFATRLGNVFTIGKGTKPWVSLPKGKGIKLTIIEEQRKR 186 + IH++D+ GH FATR+ NVF IGKG K VSLP G GI+L+I EE+ KR Sbjct: 205 DIIHIKDSAGHSFATRISNVFVIGKGNKALVSLPTGAGIRLSIAEERDKR 254
>RS4_HORSE (P55832) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 79.0 bits (193), Expect = 7e-15 Identities = 38/68 (55%), Positives = 45/68 (66%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 127 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 186 Query: 335 ETIHVEDA 312 + +HV+DA Sbjct: 187 DVVHVKDA 194
>RS4_BOVIN (P79103) 40S ribosomal protein S4 (Fragment)| Length = 194 Score = 79.0 bits (193), Expect = 7e-15 Identities = 38/68 (55%), Positives = 45/68 (66%) Frame = -1 Query: 515 TIRYPDPLIKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTF 336 TIRYPDPLIK NDTI++DLET KI DFIKFD VI NRE+H G+F Sbjct: 127 TIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSF 186 Query: 335 ETIHVEDA 312 + +HV+DA Sbjct: 187 DVVHVKDA 194
>FOSB_BACLD (Q65KJ5) Metallothiol transferase fosB (EC 2.5.1.-) (Fosfomycin| resistance protein) Length = 154 Score = 33.5 bits (75), Expect = 0.35 Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = -1 Query: 368 IKNREKHKGTFETIHVEDAQGHQFATRLGNVF---TIGKGTKPWVSLPKG 228 +K R++H+G ++I+ D GH+F G+VF + KP +S +G Sbjct: 95 LKGRKRHEGDRDSIYFSDPDGHKFELHTGSVFDRLQYYQNEKPHLSFHEG 144
>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)| Length = 1117 Score = 33.1 bits (74), Expect = 0.46 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%) Frame = +3 Query: 324 VDGLKGSLMLLPVLD----HTNTPSVAPTSHHDDVADVKLDEVNNLVGLQVELDGV 479 ++ LK + L+P D H N +VA T H + D+ D+++N V ++ E D + Sbjct: 72 IENLKDNQDLIPNNDVNGIHINNSAVADTKHKPKIGDIAADDISNEVSIKNEGDTI 127
>Y977_HAEDU (Q7VMJ8) UPF0078 membrane protein HD_0977| Length = 199 Score = 31.2 bits (69), Expect = 1.8 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 6/36 (16%) Frame = +3 Query: 267 NGEH------VAQTGGKLVTLGILNVDGLKGSLMLL 356 NG H V + GGKL +G+L D LKGSL +L Sbjct: 36 NGSHNPGATNVLRNGGKLAAIGVLLFDTLKGSLPVL 71
>LEU1_SOYBN (Q39891) Probable 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) (Late nodulin 56) (N-56) Length = 565 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = -1 Query: 353 KHKGTFETIHVEDAQGHQFATRLGNV 276 KHKGT+ETI E+ GH+ TR+G V Sbjct: 345 KHKGTYETISPEEI-GHKRTTRIGIV 369
>RS4_CHLS6 (Q40941) 40S ribosomal protein S4| Length = 242 Score = 30.0 bits (66), Expect = 3.9 Identities = 20/85 (23%), Positives = 35/85 (41%) Frame = -1 Query: 491 IKANDTIKLDLETNKIVDFIKFDXXXXXXXXXXXXXXXXXVIKNREKHKGTFETIHVEDA 312 IK D++ + ++IV +KF+ VIK K K + IH+E Sbjct: 154 IKVEDSLLIKTINDEIVYALKFEVGSLCLITRGKHLGTIAVIKEIRKTKSLRKMIHLEKI 213 Query: 311 QGHQFATRLGNVFTIGKGTKPWVSL 237 G + + ++ IG+ +SL Sbjct: 214 DGKKLTKKCSDLLVIGESKTSILSL 238
>YCGV_ECO57 (Q8X583) Hypothetical protein ycgV| Length = 547 Score = 30.0 bits (66), Expect = 3.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -1 Query: 344 GTFETIHVEDAQGHQFATRLGNVFTIGKGTKPW 246 GTF T++VE+ G+ +V G G KPW Sbjct: 514 GTFTTLNVENLSGNSTFIMRADVVGEGNGVKPW 546
>MRAW_BACHK (Q6HEP6) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 310 Score = 29.6 bits (65), Expect = 5.1 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%) Frame = +3 Query: 297 KLVTLGILNVDGLKGSL-MLLPVLDHTNTPSVAPTSHHDDVADVKLDEVNNLVGLQV 464 KL LGI VDG+ L + P LD TP + HHD D+++D+ +L V Sbjct: 85 KLQELGITEVDGILFDLGVSSPQLD---TPERGFSYHHDAPLDMRMDQDASLTAYDV 138 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,040,868 Number of Sequences: 219361 Number of extensions: 1526578 Number of successful extensions: 4381 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4187 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4345 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3869946934 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)